RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 MAGEB6Q8N7X4 407 aa10.6□□□□□ -0.71
PDLIM5-213ENST00000509357 CFHR5Q9BXR6 569 aa10.6□□□□□ -0.71
PDLIM5-213ENST00000509357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDLIM5-213ENST00000509357 ZNF112Q9UJU3 913 aa10.6□□□□□ -0.71
PDLIM5-213ENST00000509357 BAZ2AQ9UIF9 1905 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-213ENST00000509357 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 IGSF3O75054 1194 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 DYNLL1P63167 89 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 TTF1Q15361 905 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 PKN2Q16513 984 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 NOM1Q5C9Z4 860 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 MAPKAPK5Q8IW41 473 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 SCYL3Q8IZE3 742 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 MIGA1Q8NAN2 632 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 TGFBRAP1Q8WUH2 860 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 ERO1AQ96HE7 468 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 OSBPL3Q9H4L5 887 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 PAG1Q9NWQ8 432 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
PDLIM5-213ENST00000509357 MYH1P12882 1939 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 FAM196BA6NMK8 535 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 PHF20L1A8MW92 1017 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 BTBD19C9JJ37 291 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 SMIM22K7EJ46 135 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 CTNND1O60716 968 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 NPM3O75607 178 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 PDE6AP16499 860 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 USP5P45974 858 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 PPP4CP60510 307 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 SP3Q02447 781 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 ARHGEF6Q15052 776 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 NOL9Q5SY16 702 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 FAM43AQ8N2R8 423 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 CRACR2BQ8N4Y2 399 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 IL25Q9H293 177 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 DHX36Q9H2U1 1008 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 TRIM17Q9Y577 477 aa10.58□□□□□ -0.72
PDLIM5-213ENST00000509357 ATRNL1Q5VV63 1379 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 FOXP2O15409 715 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 TBC1D12O60347 775 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 HLA-DOAP06340 250 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 PTPRAP18433 802 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 ADD2P35612 726 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 KIF22Q14807 665 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 SLC4A8Q2Y0W8 1093 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 SLC9C2Q5TAH2 1124 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 CENPQQ7L2Z9 268 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 CERS3Q8IU89 383 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 CD99L2Q8TCZ2 262 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 SEC62Q99442 399 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 RIOK1Q9BRS2 568 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 PI4KBQ9UBF8 816 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 ZNF532Q9HCE3 1301 aa10.57□□□□□ -0.72
PDLIM5-213ENST00000509357 MAGEB6P1A0A0J9YX57 407 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 TRIM75PA6NK02 468 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 PDHXO00330 501 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 CXCL11O14625 94 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 GLRX3O76003 335 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 FBXO46Q6PJ61 603 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 FASTKD5Q7L8L6 764 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 KBTBD3Q8NAB2 608 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 OSBP2Q969R2 916 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 CCDC136Q96JN2 1154 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 PUS7LQ9H0K6 701 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 EFCC1Q9HA90 598 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 ZCCHC17Q9NP64 241 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 PPP4R2Q9NY27 417 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 HERC5Q9UII4 1024 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 PALD1Q9ULE6 856 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 KCNH4Q9UQ05 1017 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 LAMB1P07942 1786 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 FLT1P17948 1338 aa10.56□□□□□ -0.72
PDLIM5-213ENST00000509357 M0R2C6 588 aa10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 TLR2O60603 784 aa10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 NEFLP07196 543 aa10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 TTC22Q5TAA0 569 aa10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 TMED8Q6PL24 325 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 ANKRD23Q86SG2 305 aa10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 FOXP4Q8IVH2 680 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 LCORLQ8N3X6 602 aa10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 ATAD5Q96QE3 1844 aa10.55□□□□□ -0.72
PDLIM5-213ENST00000509357 PHIPQ8WWQ0 1821 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 A0A0D9SFI3 127 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 PRKAB2O43741 272 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 POLR3DP05423 398 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 CAP2P40123 477 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 SOX10P56693 466 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 OTOP1Q7RTM1 612 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 CCDC84Q86UT8 332 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 FAM227BQ96M60 508 aa10.54□□□□□ -0.72
PDLIM5-213ENST00000509357 PARK7Q99497 189 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms