RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ANKRD45Q5TZF3 282 aa19.55■□□□□ 0.72
PDLIM5-212ENST00000509333 OTUD7AQ8TE49 926 aaPredicted RBP19.55■□□□□ 0.72
PDLIM5-212ENST00000509333 GCC1Q96CN9 775 aa19.55■□□□□ 0.72
PDLIM5-212ENST00000509333 HERC5Q9UII4 1024 aaKnown RBP19.55■□□□□ 0.72
PDLIM5-212ENST00000509333 AFG3L2Q9Y4W6 797 aa19.55■□□□□ 0.72
PDLIM5-212ENST00000509333 COL2A1P02458 1487 aaPredicted RBP19.54■□□□□ 0.72
PDLIM5-212ENST00000509333 CHGBP05060 677 aa19.54■□□□□ 0.72
PDLIM5-212ENST00000509333 MOGSQ13724 837 aa19.54■□□□□ 0.72
PDLIM5-212ENST00000509333 UBE3CQ15386 1083 aa19.54■□□□□ 0.72
PDLIM5-212ENST00000509333 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
PDLIM5-212ENST00000509333 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
PDLIM5-212ENST00000509333 OTOFQ9HC10 1997 aa19.53■□□□□ 0.72
PDLIM5-212ENST00000509333 BTBD19C9JJ37 291 aa19.53■□□□□ 0.72
PDLIM5-212ENST00000509333 CAP2P40123 477 aa19.53■□□□□ 0.72
PDLIM5-212ENST00000509333 USP5P45974 858 aa19.53■□□□□ 0.72
PDLIM5-212ENST00000509333 CRHR2Q13324 411 aa19.53■□□□□ 0.72
PDLIM5-212ENST00000509333 TSHZ3Q63HK5 1081 aa19.53■□□□□ 0.72
PDLIM5-212ENST00000509333 FKTNO75072 461 aa19.52■□□□□ 0.72
PDLIM5-212ENST00000509333 IGHDP01880 384 aa19.52■□□□□ 0.72
PDLIM5-212ENST00000509333 DGKZQ13574 1117 aa19.52■□□□□ 0.72
PDLIM5-212ENST00000509333 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
PDLIM5-212ENST00000509333 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.52■□□□□ 0.72
PDLIM5-212ENST00000509333 MCOLN1Q9GZU1 580 aa19.52■□□□□ 0.72
PDLIM5-212ENST00000509333 RWDD1Q9H446 243 aaPredicted RBP19.52■□□□□ 0.72
PDLIM5-212ENST00000509333 DNAJC18Q9H819 358 aa19.52■□□□□ 0.72
PDLIM5-212ENST00000509333 TTC41PQ6P2S7 1318 aa19.51■□□□□ 0.71
PDLIM5-212ENST00000509333 JAG1P78504 1218 aa19.51■□□□□ 0.71
PDLIM5-212ENST00000509333 SMC5Q8IY18 1101 aa19.51■□□□□ 0.71
PDLIM5-212ENST00000509333 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
PDLIM5-212ENST00000509333 PI4K2BQ8TCG2 481 aa19.51■□□□□ 0.71
PDLIM5-212ENST00000509333 ZCCHC17Q9NP64 241 aaKnown RBP19.51■□□□□ 0.71
PDLIM5-212ENST00000509333 PLCD1P51178 756 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 ZSCAN25Q6NSZ9 544 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 GPAT2Q6NUI2 795 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 CTU1Q7Z7A3 348 aaKnown RBP19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 ANKRD23Q86SG2 305 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 TTC6Q86TZ1 520 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 CCDC84Q86UT8 332 aaPredicted RBP19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 KBTBD3Q8NAB2 608 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 ABHD8Q96I13 439 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 CRNKL1Q9BZJ0 848 aaKnown RBP19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 ZFYVE28Q9HCC9 887 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 SALL3Q9BXA9 1300 aa19.5■□□□□ 0.71
PDLIM5-212ENST00000509333 DOCK2Q92608 1830 aa19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 A0A0G2JLL6 359 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 PRKAB2O43741 272 aa19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 HLA-DOAP06340 250 aa19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 TAF1CQ15572 869 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 TATDN1Q6P1N9 297 aa19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 PRRT2Q7Z6L0 340 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 PUS7LQ9H0K6 701 aaKnown RBP19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 STAP2Q9UGK3 403 aa19.49■□□□□ 0.71
PDLIM5-212ENST00000509333 ERC2O15083 957 aa19.48■□□□□ 0.71
PDLIM5-212ENST00000509333 GLRX3O76003 335 aaKnown RBP19.48■□□□□ 0.71
PDLIM5-212ENST00000509333 SPP2Q13103 211 aa19.48■□□□□ 0.71
PDLIM5-212ENST00000509333 SLC4A8Q2Y0W8 1093 aa19.48■□□□□ 0.71
PDLIM5-212ENST00000509333 FASTKD5Q7L8L6 764 aaKnown RBP19.48■□□□□ 0.71
PDLIM5-212ENST00000509333 CRACR2BQ8N4Y2 399 aaPredicted RBP19.48■□□□□ 0.71
PDLIM5-212ENST00000509333 SDR42E1Q8WUS8 393 aa19.48■□□□□ 0.71
PDLIM5-212ENST00000509333 EHD4Q9H223 541 aa19.48■□□□□ 0.71
PDLIM5-212ENST00000509333 USP17L5A8MUK1 530 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 PDHXO00330 501 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 RNF113AO15541 343 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 TLR2O60603 784 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 MBD4O95243 580 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 POLR3DP05423 398 aaPredicted RBP19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 MX1P20591 662 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 SP3Q02447 781 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 ATP8A2Q9NTI2 1148 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 GINM1Q9NU53 330 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 SERPINB13Q9UIV8 391 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 LAMB1P07942 1786 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 MAST2Q6P0Q8 1798 aa19.47■□□□□ 0.71
PDLIM5-212ENST00000509333 TRIM75PA6NK02 468 aa19.46■□□□□ 0.71
PDLIM5-212ENST00000509333 GABPAQ06546 454 aa19.46■□□□□ 0.71
PDLIM5-212ENST00000509333 ZNF280CQ8ND82 737 aa19.46■□□□□ 0.71
PDLIM5-212ENST00000509333 STRBPQ96SI9 672 aaKnown RBP19.46■□□□□ 0.71
PDLIM5-212ENST00000509333 WDR18Q9BV38 432 aa19.46■□□□□ 0.71
PDLIM5-212ENST00000509333 MCM9Q9NXL9 1143 aa19.46■□□□□ 0.71
PDLIM5-212ENST00000509333 CDK5RAP2Q96SN8 1893 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 CAPN15O75808 1086 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 ASNSP08243 561 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 PDE1AP54750 535 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 CAP1Q01518 475 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 EVX2Q03828 476 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 PKN2Q16513 984 aaKnown RBP19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 SHROOM1Q2M3G4 852 aaPredicted RBP19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 B4GALNT3Q6L9W6 998 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 C17orf99Q6UX52 265 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 OSBP2Q969R2 916 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 TRIM34Q9BYJ4 488 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 TBC1D2Q9BYX2 928 aa19.45■□□□□ 0.7
PDLIM5-212ENST00000509333 ZFYP08048 801 aaPredicted RBP19.44■□□□□ 0.7
PDLIM5-212ENST00000509333 GDF11O95390 407 aa19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 CYP2D6P10635 497 aa19.43■□□□□ 0.7
PDLIM5-212ENST00000509333 SHMT1P34896 483 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms