RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, human

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-208	ENST00000509177	PRO3102	Q9H379	93 aa		13.26	□□□□□ -0.29
TUSC3-208	ENST00000509177	ZNF112	Q9UJU3	913 aa		13.26	□□□□□ -0.29
TUSC3-208	ENST00000509177	MYPN	Q86TC9	1320 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	MAP4K4	O95819	1239 aa	Predicted RBP	13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	GJB1	P08034	283 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	HOXD10	P28358	340 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	AACS	Q86V21	672 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	TEX11	Q8IYF3	940 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	NKX2-3	Q8TAU0	364 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	EAF2	Q96CJ1	260 aa	Predicted RBP	13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	RNF208	Q9H0X6	261 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	PICK1	Q9NRD5	415 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	DBNL	Q9UJU6	430 aa	Known RBP	13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	AK9	Q5TCS8	1911 aa		13.25	□□□□□ -0.29
TUSC3-208	ENST00000509177	DDTL	A6NHG4	134 aa	Predicted RBP	13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	BCR	P11274	1271 aa		13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	ZAP70	P43403	619 aa		13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	PRKCZ	Q05513	592 aa		13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	GPAT2	Q6NUI2	795 aa		13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	IL1RAPL2	Q9NP60	686 aa		13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	DDX4	Q9NQI0	724 aa	Known RBP	13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	TLR7	Q9NYK1	1049 aa	Known RBP	13.24	□□□□□ -0.29
TUSC3-208	ENST00000509177	MYH2	Q9UKX2	1941 aa		13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	CYP2E1	P05181	493 aa	Predicted RBP	13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	CYP2C8	P10632	490 aa		13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	PLCG2	P16885	1265 aa		13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	RHBDL3	P58872	404 aa		13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	NOL9	Q5SY16	702 aa	Known RBP	13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	ZNF384	Q8TF68	577 aa		13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	U2AF1L4	Q8WU68	220 aa	Known RBP	13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	HTATIP2	Q9BUP3	242 aa		13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	ZBTB40	Q9NUA8	1239 aa		13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	BIN2	Q9UBW5	565 aa	Predicted RBP	13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	GABRQ	Q9UN88	632 aa		13.23	□□□□□ -0.29
TUSC3-208	ENST00000509177	IDH1	O75874	414 aa	Known RBP	13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	IFIT2	P09913	472 aa	Known RBP	13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	FCGRT	P55899	365 aa		13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	SH3BP5L	Q7L8J4	393 aa		13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	CLASRP	Q8N2M8	674 aa	Known RBP	13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	RHPN1	Q8TCX5	695 aa		13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	KIF1BP	Q96EK5	621 aa		13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	PARK7	Q99497	189 aa	Known RBP	13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	UNC93B1	Q9H1C4	597 aa		13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	PIH1D3	Q9NQM4	214 aa	Known RBP	13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	ZHX2	Q9Y6X8	837 aa		13.22	□□□□□ -0.29
TUSC3-208	ENST00000509177	PHF20L1	A8MW92	1017 aa		13.21	□□□□□ -0.29
TUSC3-208	ENST00000509177	CXCL11	O14625	94 aa		13.21	□□□□□ -0.29
TUSC3-208	ENST00000509177	CYP7A1	P22680	504 aa		13.21	□□□□□ -0.29
TUSC3-208	ENST00000509177	UBXN2A	P68543	259 aa		13.21	□□□□□ -0.29
TUSC3-208	ENST00000509177	PDE3A	Q14432	1141 aa		13.21	□□□□□ -0.29
TUSC3-208	ENST00000509177	SCYL3	Q8IZE3	742 aa		13.21	□□□□□ -0.29
TUSC3-208	ENST00000509177	SLAIN1	Q8ND83	568 aa		13.21	□□□□□ -0.29
TUSC3-208	ENST00000509177	TRIM34	Q9BYJ4	488 aa		13.21	□□□□□ -0.29
TUSC3-208	ENST00000509177	MGAM	O43451	1857 aa		13.21	□□□□□ -0.3
TUSC3-208	ENST00000509177	ATRNL1	Q5VV63	1379 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	CTNND1	O60716	968 aa	Known RBP	13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	IGSF3	O75054	1194 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	RAB11FIP3	O75154	756 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	FARP2	O94887	1054 aa	Predicted RBP	13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	SGPL1	O95470	568 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	MAP3K12	Q12852	859 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	C20orf194	Q5TEA3	1177 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	TGFBRAP1	Q8WUH2	860 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	NR2E3	Q9Y5X4	410 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177	NDUFB9	Q9Y6M9	179 aa		13.2	□□□□□ -0.3
TUSC3-208	ENST00000509177		A0A0G2JLL6	359 aa	Predicted RBP	13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	ADCY3	O60266	1144 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	TBC1D12	O60347	775 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	SLURP2	P0DP57	97 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	ELN	P15502	786 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	PTPRA	P18433	802 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	FLT3LG	P49771	235 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	PPP4C	P60510	307 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	MAP3K10	Q02779	954 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	GADL1	Q6ZQY3	521 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	MAPKAPK5	Q8IW41	473 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	SIRT2	Q8IXJ6	389 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	MAGEB6	Q8N7X4	407 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	DHX36	Q9H2U1	1008 aa	Known RBP	13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	CUL9	Q8IWT3	2517 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	RFX7	Q2KHR2	1363 aa		13.19	□□□□□ -0.3
TUSC3-208	ENST00000509177	FAM196B	A6NMK8	535 aa		13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	SOX1	O00570	391 aa	Predicted RBP	13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	INHA	P05111	366 aa		13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	USP5	P45974	858 aa		13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	DYNLL1	P63167	89 aa	Known RBP	13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	TTF1	Q15361	905 aa	Predicted RBP	13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	FASTKD5	Q7L8L6	764 aa	Known RBP	13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	ADGRA1	Q86SQ6	560 aa		13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	MIGA1	Q8NAN2	632 aa		13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	DNAJC2	Q99543	621 aa	Known RBP	13.18	□□□□□ -0.3
TUSC3-208	ENST00000509177	PI4KB	Q9UBF8	816 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms