RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CARS2Q9HA77 564 aaKnown RBP4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 GTF2IRD1Q9UHL9 959 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 RAPGEFL1Q9UHV5 662 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 IGF2BP3O00425 579 aaKnown RBP eCLIP4.67□□□□□ -1.66
DEPDC1B-204ENST00000509006 EIF1AYO14602 144 aaKnown RBP4.67□□□□□ -1.66
DEPDC1B-204ENST00000509006 ZC3H12AQ5D1E8 599 aaKnown RBP4.67□□□□□ -1.66
DEPDC1B-204ENST00000509006 RNF214Q8ND24 703 aa4.67□□□□□ -1.66
DEPDC1B-204ENST00000509006 CD320Q9NPF0 282 aa4.67□□□□□ -1.66
DEPDC1B-204ENST00000509006 PRDM10Q9NQV6 1147 aa4.67□□□□□ -1.66
DEPDC1B-204ENST00000509006 GPN3Q9UHW5 284 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1B-204ENST00000509006 GNAT3A8MTJ3 354 aa4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 CLCN7P51798 805 aa4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 CTSWP56202 376 aa4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 ERVK-24P63145 666 aa4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 HNRNPUQ00839 825 aaKnown RBP eCLIP4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 GRM2Q14416 872 aa4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 KCNA10Q16322 511 aa4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 AMIGO3Q86WK7 504 aa4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 ALKBH8Q96BT7 664 aaKnown RBP4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 ATP13A1Q9HD20 1204 aa4.66□□□□□ -1.66
DEPDC1B-204ENST00000509006 EOMESO95936 686 aa4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 NTF4P34130 210 aa4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 PPM1JQ5JR12 505 aa4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 MAP1SQ66K74 1059 aaPredicted RBP4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 ATG14Q6ZNE5 492 aa4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 SULF2Q8IWU5 870 aa4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 NIF3L1Q9GZT8 377 aa4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 JAG2Q9Y219 1238 aa4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 CSADQ9Y600 493 aa4.65□□□□□ -1.67
DEPDC1B-204ENST00000509006 TMEM253P0C7T8 217 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 GDNFP39905 211 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 CIAPIN1Q6FI81 312 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 GPBAR1Q8TDU6 330 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 EPS8L3Q8TE67 593 aaKnown RBP4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 C20orf173Q96LM9 149 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 HSPA12BQ96MM6 686 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 CSRNP1Q96S65 589 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 RBCK1Q9BYM8 510 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 EPB41L4BQ9H329 900 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 DCP1AQ9NPI6 582 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 PRDM5Q9NQX1 630 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 SEMA3GQ9NS98 782 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 TMEM39AQ9NV64 488 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 TRAK1Q9UPV9 953 aa4.64□□□□□ -1.67
DEPDC1B-204ENST00000509006 TCAF2A6NFQ2 919 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 PRR33A8MZF0 331 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 MED14OSP0DP75 135 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 HOXA5P20719 270 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 FCGRTP55899 365 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 PPP2R3AQ06190 1150 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 MPRIPQ6WCQ1 1025 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 DTHD1Q6ZMT9 781 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 ACSBG1Q96GR2 724 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 DMRTB1Q96MA1 342 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 FOXQ1Q9C009 403 aa4.63□□□□□ -1.67
DEPDC1B-204ENST00000509006 DCDC2CA8MYV0 355 aa4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 H3BS24 57 aa4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 ETV2O00321 342 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 NUAK1O60285 661 aa4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 CDKAL1Q5VV42 579 aa4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 PI16Q6UXB8 463 aa4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 ARMCX6Q7L4S7 300 aa4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 CACNA2D2Q9NY47 1150 aa4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 SMG5Q9UPR3 1016 aaKnown RBP4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 MAPK8IP1Q9UQF2 711 aa4.62□□□□□ -1.67
DEPDC1B-204ENST00000509006 FAM155AB1AL88 458 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1B-204ENST00000509006 RBAK-RBAKDNI3L0D1 243 aa4.61□□□□□ -1.67
DEPDC1B-204ENST00000509006 ARNTP27540 789 aa4.61□□□□□ -1.67
DEPDC1B-204ENST00000509006 LINC00310P59036 64 aa4.61□□□□□ -1.67
DEPDC1B-204ENST00000509006 ZNF252P-AS1Q0IIN9 211 aa4.61□□□□□ -1.67
DEPDC1B-204ENST00000509006 NPAS4Q8IUM7 802 aa4.61□□□□□ -1.67
DEPDC1B-204ENST00000509006 PICK1Q9NRD5 415 aa4.61□□□□□ -1.67
DEPDC1B-204ENST00000509006 CNTNAP4Q9C0A0 1308 aa4.61□□□□□ -1.67
DEPDC1B-204ENST00000509006 SLITRK5O94991 958 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 GLDCP23378 1020 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 DSC3Q14574 896 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 ZBTB37Q5TC79 503 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 C12orf40Q86WS4 652 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 MFSD4AQ8N468 514 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 RETREG2Q8NC44 543 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 ABHD4Q8TB40 342 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 ALPK1Q96QP1 1244 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 BCO2Q9BYV7 579 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 IRF2BPLQ9H1B7 796 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 CBX8Q9HC52 389 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 SLAMF8Q9P0V8 285 aa4.6□□□□□ -1.67
DEPDC1B-204ENST00000509006 SOWAHDA6NJG2 315 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 XRCC5P13010 732 aaKnown RBP4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 NME2P22392 152 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 ERVFC1P60507 584 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 FGD1P98174 961 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 RING1Q06587 406 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 TMC7Q7Z402 723 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 C3orf58Q8NDZ4 430 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 GRIN3AQ8TCU5 1115 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 TMC1Q8TDI8 760 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 RELTQ969Z4 430 aa4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 TPX2Q9ULW0 747 aaKnown RBP4.59□□□□□ -1.67
DEPDC1B-204ENST00000509006 A0A0G2JLL6 359 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms