RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ERO1AQ96HE7 468 aa18.06■□□□□ 0.48
UBE2D3-228ENST00000508974 ZHX2Q9Y6X8 837 aa18.06■□□□□ 0.48
UBE2D3-228ENST00000508974 MAP4K4O95819 1239 aaPredicted RBP18.05■□□□□ 0.48
UBE2D3-228ENST00000508974 PTPRAP18433 802 aa18.05■□□□□ 0.48
UBE2D3-228ENST00000508974 CAP1Q01518 475 aa18.05■□□□□ 0.48
UBE2D3-228ENST00000508974 FBXO46Q6PJ61 603 aaPredicted RBP18.05■□□□□ 0.48
UBE2D3-228ENST00000508974 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
UBE2D3-228ENST00000508974 SAP30BPQ9UHR5 308 aaKnown RBP18.05■□□□□ 0.48
UBE2D3-228ENST00000508974 KCNH4Q9UQ05 1017 aa18.05■□□□□ 0.48
UBE2D3-228ENST00000508974 COL2A1P02458 1487 aaPredicted RBP18.05■□□□□ 0.48
UBE2D3-228ENST00000508974 FLT1P17948 1338 aa18.04■□□□□ 0.48
UBE2D3-228ENST00000508974 PDHXO00330 501 aa18.04■□□□□ 0.48
UBE2D3-228ENST00000508974 PLCG2P16885 1265 aa18.04■□□□□ 0.48
UBE2D3-228ENST00000508974 MAP3K10Q02779 954 aa18.04■□□□□ 0.48
UBE2D3-228ENST00000508974 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 CTNND1O60716 968 aaKnown RBP18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 RAB11FIP3O75154 756 aa18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 PPP4CP60510 307 aa18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 MAP3K12Q12852 859 aa18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 GADL1Q6ZQY3 521 aa18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 EFCC1Q9HA90 598 aa18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 NAV1Q8NEY1 1877 aa18.03■□□□□ 0.48
UBE2D3-228ENST00000508974 GOLIM4O00461 696 aa18.02■□□□□ 0.48
UBE2D3-228ENST00000508974 TLR2O60603 784 aa18.02■□□□□ 0.48
UBE2D3-228ENST00000508974 MOGSQ13724 837 aa18.02■□□□□ 0.48
UBE2D3-228ENST00000508974 ANKRD23Q86SG2 305 aa18.02■□□□□ 0.48
UBE2D3-228ENST00000508974 EDC3Q96F86 508 aaKnown RBP18.02■□□□□ 0.48
UBE2D3-228ENST00000508974 CPA4Q9UI42 421 aa18.02■□□□□ 0.48
UBE2D3-228ENST00000508974 HTTP42858 3142 aa18.02■□□□□ 0.47
UBE2D3-228ENST00000508974 TBC1D12O60347 775 aa18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 USP5P45974 858 aa18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 MLLT1Q03111 559 aaPredicted RBP18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 RRP1BQ14684 758 aaKnown RBP18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 CRACR2BQ8N4Y2 399 aaPredicted RBP18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 TRIM34Q9BYJ4 488 aa18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 ARHGAP39Q9C0H5 1083 aa18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 AFG3L2Q9Y4W6 797 aa18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 MYH7P12883 1935 aa18.01■□□□□ 0.47
UBE2D3-228ENST00000508974 CXCL11O14625 94 aa18■□□□□ 0.47
UBE2D3-228ENST00000508974 CYP2C8P10632 490 aa18■□□□□ 0.47
UBE2D3-228ENST00000508974 LRRCC1Q9C099 1032 aa18■□□□□ 0.47
UBE2D3-228ENST00000508974 DHX36Q9H2U1 1008 aaKnown RBP18■□□□□ 0.47
UBE2D3-228ENST00000508974 BOLA2Q9H3K6 86 aa18■□□□□ 0.47
UBE2D3-228ENST00000508974 ZCCHC17Q9NP64 241 aaKnown RBP18■□□□□ 0.47
UBE2D3-228ENST00000508974 PI4KBQ9UBF8 816 aa18■□□□□ 0.47
UBE2D3-228ENST00000508974 PTPN22Q9Y2R2 807 aa18■□□□□ 0.47
UBE2D3-228ENST00000508974 CENPFP49454 3210 aa17.99■□□□□ 0.47
UBE2D3-228ENST00000508974 A0A0G2JLL6 359 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-228ENST00000508974 TTF1Q15361 905 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-228ENST00000508974 SLC9C2Q5TAH2 1124 aa17.99■□□□□ 0.47
UBE2D3-228ENST00000508974 GPAT2Q6NUI2 795 aa17.99■□□□□ 0.47
UBE2D3-228ENST00000508974 PRRT2Q7Z6L0 340 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-228ENST00000508974 HERC5Q9UII4 1024 aaKnown RBP17.99■□□□□ 0.47
UBE2D3-228ENST00000508974 LOC285556D6RIA3 1793 aa17.99■□□□□ 0.47
UBE2D3-228ENST00000508974 DDX60LQ5H9U9 1706 aaKnown RBP17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 GDF11O95390 407 aa17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 PDE6AP16499 860 aa17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 CAP2P40123 477 aa17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 RGS19P49795 217 aa17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 RRP1P56182 461 aaKnown RBP17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 SHROOM1Q2M3G4 852 aaPredicted RBP17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 DNAJC18Q9H819 358 aa17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 MGAMO43451 1857 aa17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 ZNF532Q9HCE3 1301 aa17.98■□□□□ 0.47
UBE2D3-228ENST00000508974 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 TNRC18O15417 2968 aaPredicted RBP17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 IGSF3O75054 1194 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 LACTBP83111 547 aaPredicted RBP17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 SPP2Q13103 211 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 KIF22Q14807 665 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 SLFNL1Q499Z3 407 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 C17orf99Q6UX52 265 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 FASTKD5Q7L8L6 764 aaKnown RBP17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 PARK7Q99497 189 aaKnown RBP17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 PAG1Q9NWQ8 432 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 ADGRA2Q96PE1 1338 aa17.97■□□□□ 0.47
UBE2D3-228ENST00000508974 JAG1P78504 1218 aa17.96■□□□□ 0.47
UBE2D3-228ENST00000508974 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
UBE2D3-228ENST00000508974 PTCH2Q9Y6C5 1203 aa17.96■□□□□ 0.47
UBE2D3-228ENST00000508974 USP17L5A8MUK1 530 aa17.95■□□□□ 0.46
UBE2D3-228ENST00000508974 ATP5JP18859 108 aa17.95■□□□□ 0.46
UBE2D3-228ENST00000508974 HMGCS2P54868 508 aa17.95■□□□□ 0.46
UBE2D3-228ENST00000508974 ARHGEF6Q15052 776 aa17.95■□□□□ 0.46
UBE2D3-228ENST00000508974 ZNF280CQ8ND82 737 aa17.95■□□□□ 0.46
UBE2D3-228ENST00000508974 RIOK1Q9BRS2 568 aaKnown RBP17.95■□□□□ 0.46
UBE2D3-228ENST00000508974 BAZ2AQ9UIF9 1905 aaKnown RBP17.95■□□□□ 0.46
UBE2D3-228ENST00000508974 MYCP01106 439 aaPredicted RBP17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 CHGBP05060 677 aa17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 CTGFP29279 349 aa17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 TSHZ3Q63HK5 1081 aa17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 CERS3Q8IU89 383 aa17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 FOXP4Q8IVH2 680 aaPredicted RBP17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 LCORLQ8N3X6 602 aa17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 MYH8P13535 1937 aa17.94■□□□□ 0.46
UBE2D3-228ENST00000508974 TCRBV5S4A2TA0A5A2 114 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms