RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 TBC1D12O60347 775 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 CDC45O75419 566 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 FGAP02671 866 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 ALX1Q15699 326 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 SUPT20HL1Q3ZLR7 823 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 SBK1Q52WX2 424 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.39□□□□□ -0.43
PTPN20-220ENST00000508715 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
PTPN20-220ENST00000508715 SLC44A5Q8NCS7 719 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTPN20-220ENST00000508715 NKX2-3Q8TAU0 364 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 KLRG1Q96E93 195 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 DYNLL2Q96FJ2 89 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 DHX36Q9H2U1 1008 aaKnown RBP12.39□□□□□ -0.43
PTPN20-220ENST00000508715 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
PTPN20-220ENST00000508715 RAD50Q92878 1312 aa12.38□□□□□ -0.43
PTPN20-220ENST00000508715 HSPA6P17066 643 aa12.38□□□□□ -0.43
PTPN20-220ENST00000508715 GNAT2P19087 354 aa12.38□□□□□ -0.43
PTPN20-220ENST00000508715 INPP5BP32019 993 aa12.38□□□□□ -0.43
PTPN20-220ENST00000508715 SHMT1P34896 483 aa12.38□□□□□ -0.43
PTPN20-220ENST00000508715 LSG1Q9H089 658 aaKnown RBP12.38□□□□□ -0.43
PTPN20-220ENST00000508715 EHD4Q9H223 541 aa12.38□□□□□ -0.43
PTPN20-220ENST00000508715 PI4KBQ9UBF8 816 aa12.38□□□□□ -0.43
PTPN20-220ENST00000508715 ANGEL1Q9UNK9 670 aaKnown RBP12.38□□□□□ -0.43
PTPN20-220ENST00000508715 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-220ENST00000508715 FKBP1BP68106 108 aa12.37□□□□□ -0.43
PTPN20-220ENST00000508715 TATDN1Q6P1N9 297 aa12.37□□□□□ -0.43
PTPN20-220ENST00000508715 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-220ENST00000508715 DSCC1Q9BVC3 393 aa12.37□□□□□ -0.43
PTPN20-220ENST00000508715 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
PTPN20-220ENST00000508715 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
PTPN20-220ENST00000508715 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-220ENST00000508715 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
PTPN20-220ENST00000508715 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
PTPN20-220ENST00000508715 APPP05067 770 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 GJA5P36382 358 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 TDO2P48775 406 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 HUNKP57058 714 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 VGLL4Q14135 290 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 C2orf69Q8N8R5 385 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 ZKSCAN4Q969J2 545 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-220ENST00000508715 ZNF341Q9BYN7 854 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTPN20-220ENST00000508715 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-220ENST00000508715 SERPINB13Q9UIV8 391 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 SNCAIPQ9Y6H5 919 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 TAF6LQ9Y6J9 622 aa12.36□□□□□ -0.43
PTPN20-220ENST00000508715 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 RASSF10A6NK89 507 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 MINDY4BA8MYZ0 360 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 FAM155AB1AL88 458 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-220ENST00000508715 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-220ENST00000508715 NF2P35240 595 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 CDK8P49336 464 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 PPARAQ07869 468 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 DCAF15Q66K64 600 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 ARMC9Q7Z3E5 817 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 CCDC84Q86UT8 332 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-220ENST00000508715 RUFY2Q8WXA3 655 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 MAP4K1Q92918 833 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 WRNIP1Q96S55 665 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 ZIC5Q96T25 663 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 NAPBQ9H115 298 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 HERC5Q9UII4 1024 aaKnown RBP12.35□□□□□ -0.43
PTPN20-220ENST00000508715 ANAPC4Q9UJX5 808 aa12.35□□□□□ -0.43
PTPN20-220ENST00000508715 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTPN20-220ENST00000508715 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 HLA-DOAP06340 250 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 FGRP09769 529 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 RASA1P20936 1047 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
PTPN20-220ENST00000508715 HAND2P61296 217 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-220ENST00000508715 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-220ENST00000508715 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
PTPN20-220ENST00000508715 TBC1D10CQ8IV04 446 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPN20-220ENST00000508715 NACAP1Q9BZK3 213 aa12.34□□□□□ -0.43
PTPN20-220ENST00000508715 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.43
PTPN20-220ENST00000508715 PRDM1O75626 825 aa12.33□□□□□ -0.44
PTPN20-220ENST00000508715 GDF11O95390 407 aa12.33□□□□□ -0.44
PTPN20-220ENST00000508715 SEC24BO95487 1268 aa12.33□□□□□ -0.44
PTPN20-220ENST00000508715 CAP2P40123 477 aa12.33□□□□□ -0.44
PTPN20-220ENST00000508715 MFAP1P55081 439 aaKnown RBP12.33□□□□□ -0.44
PTPN20-220ENST00000508715 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
PTPN20-220ENST00000508715 RGMBQ6NW40 437 aa12.33□□□□□ -0.44
PTPN20-220ENST00000508715 RASAL3Q86YV0 1011 aa12.33□□□□□ -0.44
PTPN20-220ENST00000508715 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
PTPN20-220ENST00000508715 DNAJC5GQ8N7S2 189 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms