RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ANKRD13CQ8N6S4 541 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 USP38Q8NB14 1042 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 USP44Q9H0E7 712 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
NEDD9-211ENST00000508546 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 PNMA3Q9UL41 463 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 DENND2AQ9ULE3 1009 aa11.73□□□□□ -0.53
NEDD9-211ENST00000508546 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
NEDD9-211ENST00000508546 PTPRCP08575 1304 aa11.72□□□□□ -0.53
NEDD9-211ENST00000508546 SYNGAP1Q96PV0 1343 aa11.72□□□□□ -0.53
NEDD9-211ENST00000508546 HMGCRP04035 888 aa11.72□□□□□ -0.53
NEDD9-211ENST00000508546 FOSL2P15408 326 aa11.72□□□□□ -0.53
NEDD9-211ENST00000508546 ATG9AQ7Z3C6 839 aa11.72□□□□□ -0.53
NEDD9-211ENST00000508546 ZSCAN29Q8IWY8 852 aaPredicted RBP11.72□□□□□ -0.53
NEDD9-211ENST00000508546 ZGPATQ8N5A5 531 aaKnown RBP11.72□□□□□ -0.53
NEDD9-211ENST00000508546 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
NEDD9-211ENST00000508546 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
NEDD9-211ENST00000508546 TTYH1Q9H313 450 aaPredicted RBP11.72□□□□□ -0.53
NEDD9-211ENST00000508546 BDP1A6H8Y1 2624 aa11.71□□□□□ -0.53
NEDD9-211ENST00000508546 DDTLA6NHG4 134 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-211ENST00000508546 TRIM75PA6NK02 468 aa11.71□□□□□ -0.53
NEDD9-211ENST00000508546 TBC1D12O60347 775 aa11.71□□□□□ -0.53
NEDD9-211ENST00000508546 GCLCP48506 637 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-211ENST00000508546 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
NEDD9-211ENST00000508546 SEMA6BQ9H3T3 888 aa11.71□□□□□ -0.53
NEDD9-211ENST00000508546 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
NEDD9-211ENST00000508546 GJD2Q9UKL4 321 aa11.71□□□□□ -0.53
NEDD9-211ENST00000508546 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
NEDD9-211ENST00000508546 FRMPD3Q5JV73 1810 aa11.71□□□□□ -0.54
NEDD9-211ENST00000508546 PDS5AQ29RF7 1337 aaKnown RBP11.7□□□□□ -0.54
NEDD9-211ENST00000508546 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
NEDD9-211ENST00000508546 CIAO1O76071 339 aa11.7□□□□□ -0.54
NEDD9-211ENST00000508546 PHKA1P46020 1223 aa11.7□□□□□ -0.54
NEDD9-211ENST00000508546 TREML2Q5T2D2 321 aa11.7□□□□□ -0.54
NEDD9-211ENST00000508546 SLF2Q8IX21 1173 aa11.7□□□□□ -0.54
NEDD9-211ENST00000508546 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
NEDD9-211ENST00000508546 TBC1D2Q9BYX2 928 aa11.7□□□□□ -0.54
NEDD9-211ENST00000508546 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
NEDD9-211ENST00000508546 DDX4Q9NQI0 724 aaKnown RBP11.7□□□□□ -0.54
NEDD9-211ENST00000508546 CEP126Q9P2H0 1117 aa11.7□□□□□ -0.54
NEDD9-211ENST00000508546 SLURP2P0DP57 97 aa11.69□□□□□ -0.54
NEDD9-211ENST00000508546 PABPC4Q13310 644 aaKnown RBP eCLIP11.69□□□□□ -0.54
NEDD9-211ENST00000508546 LRRC26Q2I0M4 334 aa11.69□□□□□ -0.54
NEDD9-211ENST00000508546 OSBPL5Q9H0X9 879 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-211ENST00000508546 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-211ENST00000508546 OGDHLQ9ULD0 1010 aa11.69□□□□□ -0.54
NEDD9-211ENST00000508546 TRIM32Q13049 653 aa11.68□□□□□ -0.54
NEDD9-211ENST00000508546 MAP3K21Q5TCX8 1036 aa11.68□□□□□ -0.54
NEDD9-211ENST00000508546 CCDC84Q86UT8 332 aaPredicted RBP11.68□□□□□ -0.54
NEDD9-211ENST00000508546 DZIP1Q86YF9 867 aaKnown RBP11.68□□□□□ -0.54
NEDD9-211ENST00000508546 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
NEDD9-211ENST00000508546 SNX27Q96L92 541 aa11.68□□□□□ -0.54
NEDD9-211ENST00000508546 MORF4L1Q9UBU8 362 aa11.68□□□□□ -0.54
NEDD9-211ENST00000508546 DNAH12Q6ZR08 3092 aa11.68□□□□□ -0.54
NEDD9-211ENST00000508546 CDK5RAP2Q96SN8 1893 aa11.68□□□□□ -0.54
NEDD9-211ENST00000508546 MROH7-TTC4A0A0A0MT08 1334 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 GPR75-ASB3A0A0A6YYF3 556 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
NEDD9-211ENST00000508546 COL6A1P12109 1028 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 XRCC5P13010 732 aaKnown RBP11.67□□□□□ -0.54
NEDD9-211ENST00000508546 IL15P40933 162 aaPredicted RBP11.67□□□□□ -0.54
NEDD9-211ENST00000508546 BTDP43251 543 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 RHBDL3P58872 404 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 SPP2Q13103 211 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 PICALMQ13492 652 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 SPTY2D1Q68D10 685 aaPredicted RBP11.67□□□□□ -0.54
NEDD9-211ENST00000508546 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 TRIB2Q92519 343 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 SIL1Q9H173 461 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 ASCC2Q9H1I8 757 aaPredicted RBP11.67□□□□□ -0.54
NEDD9-211ENST00000508546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.67□□□□□ -0.542e-11■■□□□ 11.8
NEDD9-211ENST00000508546 SIPA1L1O43166 1804 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 MUC6Q6W4X9 2439 aa11.67□□□□□ -0.54
NEDD9-211ENST00000508546 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
NEDD9-211ENST00000508546 FOCADQ5VW36 1801 aa11.66□□□□□ -0.54
NEDD9-211ENST00000508546 CAP2P40123 477 aa11.66□□□□□ -0.54
NEDD9-211ENST00000508546 HMGCS2P54868 508 aa11.66□□□□□ -0.54
NEDD9-211ENST00000508546 RASGRF1Q13972 1273 aa11.66□□□□□ -0.54
NEDD9-211ENST00000508546 ADAMTS19Q8TE59 1207 aa11.66□□□□□ -0.54
NEDD9-211ENST00000508546 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
NEDD9-211ENST00000508546 FAM196BA6NMK8 535 aa11.65□□□□□ -0.54
NEDD9-211ENST00000508546 USP17L5A8MUK1 530 aa11.65□□□□□ -0.54
NEDD9-211ENST00000508546 ADORA1P30542 326 aa11.65□□□□□ -0.54
NEDD9-211ENST00000508546 TRMT44Q8IYL2 757 aaKnown RBP11.65□□□□□ -0.54
NEDD9-211ENST00000508546 SOCS4Q8WXH5 440 aa11.65□□□□□ -0.54
NEDD9-211ENST00000508546 SSH1Q8WYL5 1049 aa11.65□□□□□ -0.54
NEDD9-211ENST00000508546 UBTFL1P0CB47 393 aaPredicted RBP11.64□□□□□ -0.55
NEDD9-211ENST00000508546 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
NEDD9-211ENST00000508546 CYP2B6P20813 491 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 HOXA7P31268 230 aaPredicted RBP11.64□□□□□ -0.55
NEDD9-211ENST00000508546 MECOMQ03112 1051 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 C9orf50Q5SZB4 431 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 ERICH6Q7L0X2 663 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 ZNF384Q8TF68 577 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 NUDT12Q9BQG2 462 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 WDR18Q9BV38 432 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 AS3MTQ9HBK9 375 aa11.64□□□□□ -0.55
NEDD9-211ENST00000508546 COPRSQ9NQ92 184 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms