RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 OTUD7AQ8TE49 926 aaPredicted RBP18.21■□□□□ 0.51
TRIO-211ENST00000508343 BRI3BPQ8WY22 251 aa18.21■□□□□ 0.51
TRIO-211ENST00000508343 SAP30BPQ9UHR5 308 aaKnown RBP18.21■□□□□ 0.51
TRIO-211ENST00000508343 FAM196BA6NMK8 535 aa18.2■□□□□ 0.5
TRIO-211ENST00000508343 HLA-DOAP06340 250 aa18.2■□□□□ 0.5
TRIO-211ENST00000508343 PTPRAP18433 802 aa18.2■□□□□ 0.5
TRIO-211ENST00000508343 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
TRIO-211ENST00000508343 CRNKL1Q9BZJ0 848 aaKnown RBP18.2■□□□□ 0.5
TRIO-211ENST00000508343 CXCL11O14625 94 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 GLRX3O76003 335 aaKnown RBP18.19■□□□□ 0.5
TRIO-211ENST00000508343 IGHDP01880 384 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 MX1P20591 662 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 NOM1Q5C9Z4 860 aaKnown RBP18.19■□□□□ 0.5
TRIO-211ENST00000508343 SMC5Q8IY18 1101 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 KBTBD3Q8NAB2 608 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 TRIM34Q9BYJ4 488 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 R3HDMLQ9H3Y0 253 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 KCNH4Q9UQ05 1017 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 ZHX2Q9Y6X8 837 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 LAMB1P07942 1786 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
TRIO-211ENST00000508343 GPR25O00155 361 aa18.18■□□□□ 0.5
TRIO-211ENST00000508343 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
TRIO-211ENST00000508343 LCORLQ8N3X6 602 aa18.18■□□□□ 0.5
TRIO-211ENST00000508343 CRACR2BQ8N4Y2 399 aaPredicted RBP18.18■□□□□ 0.5
TRIO-211ENST00000508343 FOCADQ5VW36 1801 aa18.18■□□□□ 0.5
TRIO-211ENST00000508343 SALL3Q9BXA9 1300 aa18.18■□□□□ 0.5
TRIO-211ENST00000508343 CDK5RAP2Q96SN8 1893 aa18.18■□□□□ 0.5
TRIO-211ENST00000508343 CHGBP05060 677 aa18.17■□□□□ 0.5
TRIO-211ENST00000508343 CAP2P40123 477 aa18.17■□□□□ 0.5
TRIO-211ENST00000508343 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
TRIO-211ENST00000508343 FAM43AQ8N2R8 423 aa18.17■□□□□ 0.5
TRIO-211ENST00000508343 ARMT1Q9H993 441 aa18.17■□□□□ 0.5
TRIO-211ENST00000508343 STAP2Q9UGK3 403 aa18.17■□□□□ 0.5
TRIO-211ENST00000508343 AFG3L2Q9Y4W6 797 aa18.17■□□□□ 0.5
TRIO-211ENST00000508343 BTBD19C9JJ37 291 aa18.16■□□□□ 0.5
TRIO-211ENST00000508343 MBD4O95243 580 aa18.16■□□□□ 0.5
TRIO-211ENST00000508343 CRHR2Q13324 411 aa18.16■□□□□ 0.5
TRIO-211ENST00000508343 RRP1BQ14684 758 aaKnown RBP18.16■□□□□ 0.5
TRIO-211ENST00000508343 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
TRIO-211ENST00000508343 B4GALNT3Q6L9W6 998 aa18.16■□□□□ 0.5
TRIO-211ENST00000508343 ZNF296Q8WUU4 475 aaPredicted RBP18.16■□□□□ 0.5
TRIO-211ENST00000508343 DNAJC18Q9H819 358 aa18.16■□□□□ 0.5
TRIO-211ENST00000508343 ZCCHC17Q9NP64 241 aaKnown RBP18.16■□□□□ 0.5
TRIO-211ENST00000508343 RNF113AO15541 343 aaKnown RBP18.15■□□□□ 0.5
TRIO-211ENST00000508343 POLR3DP05423 398 aaPredicted RBP18.15■□□□□ 0.5
TRIO-211ENST00000508343 ZFYP08048 801 aaPredicted RBP18.15■□□□□ 0.5
TRIO-211ENST00000508343 SLC4A8Q2Y0W8 1093 aa18.15■□□□□ 0.5
TRIO-211ENST00000508343 SDR42E1Q8WUS8 393 aa18.15■□□□□ 0.5
TRIO-211ENST00000508343 LNPKQ9C0E8 428 aa18.15■□□□□ 0.5
TRIO-211ENST00000508343 PUS7LQ9H0K6 701 aaKnown RBP18.15■□□□□ 0.5
TRIO-211ENST00000508343 EHD4Q9H223 541 aa18.15■□□□□ 0.5
TRIO-211ENST00000508343 DCP1AQ9NPI6 582 aaPredicted RBP18.15■□□□□ 0.5
TRIO-211ENST00000508343 ATP8A2Q9NTI2 1148 aa18.15■□□□□ 0.5
TRIO-211ENST00000508343 MCM9Q9NXL9 1143 aa18.15■□□□□ 0.5
TRIO-211ENST00000508343 SERPINB13Q9UIV8 391 aa18.15■□□□□ 0.5
TRIO-211ENST00000508343 PRKAB2O43741 272 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 FKTNO75072 461 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 PLCD1P51178 756 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 PDE1AP54750 535 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 NUCB1Q02818 461 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 MOGSQ13724 837 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 TAF1CQ15572 869 aaPredicted RBP18.14■□□□□ 0.49
TRIO-211ENST00000508343 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 ANKRD23Q86SG2 305 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 CHD1LQ86WJ1 897 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 ZFYVE28Q9HCC9 887 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 GINM1Q9NU53 330 aa18.14■□□□□ 0.49
TRIO-211ENST00000508343 MYH1P12882 1939 aa18.13■□□□□ 0.49
TRIO-211ENST00000508343 A0A0G2JLL6 359 aaPredicted RBP18.13■□□□□ 0.49
TRIO-211ENST00000508343 USP17L5A8MUK1 530 aa18.13■□□□□ 0.49
TRIO-211ENST00000508343 TATDN1Q6P1N9 297 aa18.13■□□□□ 0.49
TRIO-211ENST00000508343 FASTKD5Q7L8L6 764 aaKnown RBP18.13■□□□□ 0.49
TRIO-211ENST00000508343 PRRT2Q7Z6L0 340 aaPredicted RBP18.13■□□□□ 0.49
TRIO-211ENST00000508343 APPBP2Q92624 585 aa18.13■□□□□ 0.49
TRIO-211ENST00000508343 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.13■□□□□ 0.49
TRIO-211ENST00000508343 SIPA1L1O43166 1804 aa18.12■□□□□ 0.49
TRIO-211ENST00000508343 DOCK1Q14185 1865 aa18.12■□□□□ 0.49
TRIO-211ENST00000508343 TRIM75PA6NK02 468 aa18.12■□□□□ 0.49
TRIO-211ENST00000508343 ASNSP08243 561 aa18.12■□□□□ 0.49
TRIO-211ENST00000508343 DGKZQ13574 1117 aa18.12■□□□□ 0.49
TRIO-211ENST00000508343 CTU1Q7Z7A3 348 aaKnown RBP18.12■□□□□ 0.49
TRIO-211ENST00000508343 CCDC84Q86UT8 332 aaPredicted RBP18.12■□□□□ 0.49
TRIO-211ENST00000508343 ZNF280CQ8ND82 737 aa18.12■□□□□ 0.49
TRIO-211ENST00000508343 OSBP2Q969R2 916 aa18.12■□□□□ 0.49
TRIO-211ENST00000508343 STRBPQ96SI9 672 aaKnown RBP18.12■□□□□ 0.49
TRIO-211ENST00000508343 SLC4A4Q9Y6R1 1079 aa18.12■□□□□ 0.49
TRIO-211ENST00000508343 MYH7P12883 1935 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 PDHXO00330 501 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 JAG1P78504 1218 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 SPP2Q13103 211 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 GPAT2Q6NUI2 795 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 DDRGK1Q96HY6 314 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 FSD1Q9BTV5 496 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 MCOLN1Q9GZU1 580 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 AS3MTQ9HBK9 375 aa18.11■□□□□ 0.49
TRIO-211ENST00000508343 GDF11O95390 407 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms