RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CATSPER4Q7RTX7 472 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 NUP133Q8WUM0 1156 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 KCNH8Q96L42 1107 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 PLEKHA5Q9HAU0 1116 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 ZCCHC17Q9NP64 241 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 PDRG1Q9NUG6 133 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 GSG1L2A8MUP6 293 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 BOLA2-SMG1P6H3BVE0 249 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 UBXN2AP68543 259 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 SEPT6Q14141 434 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 GALEQ14376 348 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 MAP7D1Q3KQU3 841 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 CXorf57Q6NSI4 855 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 SPATC1Q76KD6 591 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 SRLQ86TD4 932 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 TBC1D1Q86TI0 1168 aaPredicted RBP8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 TSEN2Q8NCE0 465 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 TRIM8Q9BZR9 551 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 VPS33BQ9H267 617 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 KLHL11Q9NVR0 708 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 STAP2Q9UGK3 403 aa8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 PA2G4Q9UQ80 394 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 LUC7L2Q9Y383 392 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-206ENST00000508170 TSPY2A6NKD2 308 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 PLOD3O60568 738 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 TSPY3P0CV98 308 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 TSPY8P0CW00 308 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 HPDP32754 393 aaPredicted RBP8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 KRT20P35900 424 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 CCT2P78371 535 aaKnown RBP8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 TSPY1Q01534 308 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 TRIM14Q14142 442 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 GRM3Q14832 879 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 CYP26C1Q6V0L0 522 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 NECAB2Q7Z6G3 386 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 FAM169BQ8N8A8 192 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 PPM1MQ96MI6 270 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 SAP130Q9H0E3 1048 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 TTLL3Q9Y4R7 772 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 SNCAIPQ9Y6H5 919 aa8.75□□□□□ -1.01
PDGFRA-206ENST00000508170 hCG_1642624A0A1W2PR95 340 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 PAX7P23759 505 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 IL4RP24394 825 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 GPATCH4Q5T3I0 446 aaKnown RBP8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 ERC1Q8IUD2 1116 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 MICALL2Q8IY33 904 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 C7orf61Q8IZ16 206 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 LSMEM1Q8N8F7 131 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 GIMAP1Q8WWP7 306 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 ZBTB10Q96DT7 871 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 EAF1Q96JC9 268 aaPredicted RBP8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 SLC5A4Q9NY91 659 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 SLC4A7Q9Y6M7 1214 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 SMARCA2P51531 1590 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 CCDC88BA6NC98 1476 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 VGLL3A8MV65 326 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 FOXN3O00409 490 aaPredicted RBP8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 OPLAHO14841 1288 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 TIPRLO75663 272 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 RGS3P49796 1198 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 CBX2Q14781 532 aaPredicted RBP8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 SPOCD1Q6ZMY3 1216 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 ANKEF1Q9NU02 776 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 HOXC10Q9NYD6 342 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 HCN4Q9Y3Q4 1203 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 PHLDB1Q86UU1 1377 aa8.74□□□□□ -1.01
PDGFRA-206ENST00000508170 CNOT4O95628 575 aaKnown RBP8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 MTHFD1P11586 935 aaKnown RBP8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 GJA9P57773 515 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 PLIN5Q00G26 463 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 PLCB4Q15147 1175 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 PPP2R5EQ16537 467 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 FXNQ16595 210 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 C1orf53Q5VUE5 145 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 CCBE1Q6UXH8 406 aaPredicted RBP8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 MRPL9Q9BYD2 267 aaKnown RBP8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 GABRDO14764 452 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 ENPP1P22413 925 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 HOXD12P35452 270 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 ARMC4Q5T2S8 1044 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 TAB3Q8N5C8 712 aaPredicted RBP8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 OR8H1Q8NGG4 311 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 SHDQ96IW2 340 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 ATP8A2Q9NTI2 1148 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 MKS1Q9NXB0 559 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 TRMT1Q9NXH9 659 aaKnown RBP8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 RRN3Q9NYV6 651 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 FNIP2Q9P278 1114 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 GTF3C4Q9UKN8 822 aa8.73□□□□□ -1.01
PDGFRA-206ENST00000508170 GPRASP1Q5JY77 1395 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 FAM155AB1AL88 458 aaPredicted RBP8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 F6X3S4 739 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 CD4P01730 458 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 TNNI3KQ59H18 835 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 VPS53Q5VIR6 699 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 KIAA0319Q5VV43 1072 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms