RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 JAKMIP1Q96N16 626 aaKnown RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 FER1L6Q2WGJ9 1857 aa12.96□□□□□ -0.33
PROM1-207ENST00000508167 COL4A5P29400 1685 aa12.96□□□□□ -0.33
PROM1-207ENST00000508167 PRDM1O75626 825 aa12.96□□□□□ -0.33
PROM1-207ENST00000508167 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.33
PROM1-207ENST00000508167 RASA3Q14644 834 aa12.96□□□□□ -0.33
PROM1-207ENST00000508167 PRAMEF18Q5VWM3 479 aa12.96□□□□□ -0.33
PROM1-207ENST00000508167 KRT26Q7Z3Y9 468 aa12.96□□□□□ -0.33
PROM1-207ENST00000508167 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
PROM1-207ENST00000508167 NF2P35240 595 aa12.96□□□□□ -0.33
PROM1-207ENST00000508167 ARFGEF1Q9Y6D6 1849 aa12.96□□□□□ -0.34
PROM1-207ENST00000508167 CYP2D6P10635 497 aa12.96□□□□□ -0.34
PROM1-207ENST00000508167 ATP2B2Q01814 1243 aa12.96□□□□□ -0.34
PROM1-207ENST00000508167 PPARAQ07869 468 aa12.96□□□□□ -0.34
PROM1-207ENST00000508167 NMRK2Q9NPI5 230 aa12.96□□□□□ -0.34
PROM1-207ENST00000508167 FLT1P17948 1338 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
PROM1-207ENST00000508167 PSMA5P28066 241 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 RHBDL3P58872 404 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 ZNF280AP59817 542 aaPredicted RBP12.95□□□□□ -0.34
PROM1-207ENST00000508167 MIGA2Q7L4E1 593 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 APOBEC3FQ8IUX4 373 aaKnown RBP12.95□□□□□ -0.34
PROM1-207ENST00000508167 PANK2Q9BZ23 570 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 MYH13Q9UKX3 1938 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 KRT32Q14532 448 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 TMEM39BQ9GZU3 492 aa12.95□□□□□ -0.34
PROM1-207ENST00000508167 ASTN2O75129 1339 aaPredicted RBP12.95□□□□□ -0.34
PROM1-207ENST00000508167 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
PROM1-207ENST00000508167 YY1P25490 414 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 KLHL40Q2TBA0 621 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 OSBPL5Q9H0X9 879 aaPredicted RBP12.94□□□□□ -0.34
PROM1-207ENST00000508167 DEFB129Q9H1M3 183 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
PROM1-207ENST00000508167 MTMR7Q9Y216 660 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 ERICH2A1L162 156 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 TSPY2A6NKD2 308 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 NUCB2P80303 420 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 DHX36Q9H2U1 1008 aaKnown RBP12.94□□□□□ -0.34
PROM1-207ENST00000508167 EPB41L4AQ9HCS5 686 aaPredicted RBP12.94□□□□□ -0.34
PROM1-207ENST00000508167 TPCN1Q9ULQ1 816 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 ZBTB22O15209 634 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
PROM1-207ENST00000508167 USP50Q70EL3 339 aaPredicted RBP12.94□□□□□ -0.34
PROM1-207ENST00000508167 DYNLL2Q96FJ2 89 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 DDX4Q9NQI0 724 aaKnown RBP12.94□□□□□ -0.34
PROM1-207ENST00000508167 CCDC88AQ3V6T2 1871 aa12.94□□□□□ -0.34
PROM1-207ENST00000508167 FAM196BA6NMK8 535 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 HSP90AA1P07900 732 aaKnown RBP12.93□□□□□ -0.34
PROM1-207ENST00000508167 CTR9Q6PD62 1173 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 LARP6Q9BRS8 491 aaKnown RBP12.93□□□□□ -0.34
PROM1-207ENST00000508167 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.93□□□□□ -0.34
PROM1-207ENST00000508167 PI4KBQ9UBF8 816 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 ME3Q16798 604 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
PROM1-207ENST00000508167 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 USP48Q86UV5 1035 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 UBAC1Q9BSL1 405 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 SERPINB13Q9UIV8 391 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 ENTPD3O75355 529 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 CYP21A2P08686 494 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 NCOA7Q8NI08 942 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 FAM151AQ8WW52 585 aa12.93□□□□□ -0.34
PROM1-207ENST00000508167 SART3Q15020 963 aaKnown RBP12.92□□□□□ -0.34
PROM1-207ENST00000508167 NFXL1Q6ZNB6 911 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 ZFPM1Q8IX07 1006 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 CHMP4CQ96CF2 233 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 NEK1Q96PY6 1258 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 TSPY3P0CV98 308 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 TSPY8P0CW00 308 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 NKX2-3Q8TAU0 364 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 ESR2Q92731 530 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 TCEANC2Q96MN5 208 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 CABP5Q9NP86 173 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 UTRNP46939 3433 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 B4E1Z4 1266 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 DTNBO60941 627 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 PLCD1P51178 756 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 CHST3Q7LGC8 479 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 HOOK2Q96ED9 719 aa12.92□□□□□ -0.34
PROM1-207ENST00000508167 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
PROM1-207ENST00000508167 KDM4AO75164 1064 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 MTMR14Q8NCE2 650 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 SLC44A5Q8NCS7 719 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 GBP4Q96PP9 640 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 KRT23Q9C075 422 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 INCENPQ9NQS7 918 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 HIRAP54198 1017 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms