RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 SMTNP53814 917 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 DCTN1Q14203 1278 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 CST9Q5W186 159 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 CHSY3Q70JA7 882 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 PLPP7Q8NBV4 271 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 RTF1Q92541 710 aaKnown RBP9.87□□□□□ -0.83
CDH6-204ENST00000508132 THUMPD2Q9BTF0 503 aaKnown RBP9.87□□□□□ -0.83
CDH6-204ENST00000508132 DDX21Q9NR30 783 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDH6-204ENST00000508132 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
CDH6-204ENST00000508132 LAS1LQ9Y4W2 734 aaKnown RBP9.87□□□□□ -0.83
CDH6-204ENST00000508132 HTTP42858 3142 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 GNAT3A8MTJ3 354 aa9.86□□□□□ -0.83
CDH6-204ENST00000508132 PIK3CDO00329 1044 aa9.86□□□□□ -0.83
CDH6-204ENST00000508132 C21orf2O43822 256 aa9.86□□□□□ -0.83
CDH6-204ENST00000508132 ABL2P42684 1182 aa9.86□□□□□ -0.83
CDH6-204ENST00000508132 GNAI1P63096 354 aa9.86□□□□□ -0.83
CDH6-204ENST00000508132 IRX6P78412 446 aaPredicted RBP9.86□□□□□ -0.83
CDH6-204ENST00000508132 TNP2Q05952 138 aa9.86□□□□□ -0.83
CDH6-204ENST00000508132 PLEKHO1Q53GL0 409 aaPredicted RBP9.86□□□□□ -0.83
CDH6-204ENST00000508132 MCM10Q7L590 875 aa9.86□□□□□ -0.83
CDH6-204ENST00000508132 TSR2Q969E8 191 aaKnown RBP9.86□□□□□ -0.83
CDH6-204ENST00000508132 NIFKQ9BYG3 293 aaKnown RBP9.86□□□□□ -0.83
CDH6-204ENST00000508132 IFT57Q9NWB7 429 aa9.86□□□□□ -0.83
CDH6-204ENST00000508132 FANCIQ9NVI1 1328 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 CENPFP49454 3210 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 NCAPD2Q15021 1401 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 TRAF5O00463 557 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 KHNYNO15037 678 aaKnown RBP9.85□□□□□ -0.83
CDH6-204ENST00000508132 ZNF853P0CG23 659 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 EPHX2P34913 555 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 RRP1P56182 461 aaKnown RBP9.85□□□□□ -0.83
CDH6-204ENST00000508132 AMOTQ4VCS5 1084 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 FIGNL1Q6PIW4 674 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 ALYREFQ86V81 257 aaKnown RBP9.85□□□□□ -0.83
CDH6-204ENST00000508132 NLRP8Q86W28 1048 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 C2CD5Q86YS7 1000 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 Q8N3U1 123 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 TMOD3Q9NYL9 352 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 ARFGEF2Q9Y6D5 1785 aa9.85□□□□□ -0.83
CDH6-204ENST00000508132 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
CDH6-204ENST00000508132 PCBP4P57723 403 aaKnown RBP9.84□□□□□ -0.83
CDH6-204ENST00000508132 EXOSC9Q06265 439 aaKnown RBP9.84□□□□□ -0.83
CDH6-204ENST00000508132 ARSJQ5FYB0 599 aaPredicted RBP9.84□□□□□ -0.83
CDH6-204ENST00000508132 CIAPIN1Q6FI81 312 aa9.84□□□□□ -0.83
CDH6-204ENST00000508132 GCC1Q96CN9 775 aa9.84□□□□□ -0.83
CDH6-204ENST00000508132 UNC80Q8N2C7 3258 aa9.84□□□□□ -0.83
CDH6-204ENST00000508132 CT47B1P0C2W7 299 aaPredicted RBP9.83□□□□□ -0.84
CDH6-204ENST00000508132 MAP2K2P36507 400 aa9.83□□□□□ -0.84
CDH6-204ENST00000508132 ECE1P42892 770 aa9.83□□□□□ -0.84
CDH6-204ENST00000508132 NFIXQ14938 502 aa9.83□□□□□ -0.84
CDH6-204ENST00000508132 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
CDH6-204ENST00000508132 TRIM11Q96F44 468 aa9.83□□□□□ -0.84
CDH6-204ENST00000508132 HACL1Q9UJ83 578 aa9.83□□□□□ -0.84
CDH6-204ENST00000508132 LTBP3Q9NS15 1303 aa9.82□□□□□ -0.84
CDH6-204ENST00000508132 CHL1O00533 1208 aa9.82□□□□□ -0.84
CDH6-204ENST00000508132 PLIN1O60240 522 aa9.82□□□□□ -0.84
CDH6-204ENST00000508132 BCAR3O75815 825 aa9.82□□□□□ -0.84
CDH6-204ENST00000508132 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
CDH6-204ENST00000508132 MTFR1Q15390 333 aa9.82□□□□□ -0.84
CDH6-204ENST00000508132 AKAP4Q5JQC9 854 aa9.82□□□□□ -0.84
CDH6-204ENST00000508132 ZNF530Q6P9A1 599 aaPredicted RBP9.82□□□□□ -0.84
CDH6-204ENST00000508132 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.82□□□□□ -0.84
CDH6-204ENST00000508132 IL17REQ8NFR9 667 aa9.82□□□□□ -0.84
CDH6-204ENST00000508132 C1orf216Q8TAB5 229 aa9.82□□□□□ -0.84
CDH6-204ENST00000508132 CA12O43570 354 aa9.81□□□□□ -0.84
CDH6-204ENST00000508132 ADH6P28332 368 aa9.81□□□□□ -0.84
CDH6-204ENST00000508132 TXLNAP40222 546 aa9.81□□□□□ -0.84
CDH6-204ENST00000508132 CRKLP46109 303 aaKnown RBP9.81□□□□□ -0.84
CDH6-204ENST00000508132 C1orf141Q5JVX7 400 aa9.81□□□□□ -0.84
CDH6-204ENST00000508132 USPL1Q5W0Q7 1092 aa9.81□□□□□ -0.84
CDH6-204ENST00000508132 TAOK3Q9H2K8 898 aa9.81□□□□□ -0.84
CDH6-204ENST00000508132 SPG7Q9UQ90 795 aa9.81□□□□□ -0.84
CDH6-204ENST00000508132 PCDHGA11Q9Y5H2 935 aa9.81□□□□□ -0.84
CDH6-204ENST00000508132 COL4A5P29400 1685 aa9.8□□□□□ -0.84
CDH6-204ENST00000508132 A6NJY4 79 aa9.8□□□□□ -0.84
CDH6-204ENST00000508132 TAF7Q15545 349 aaPredicted RBP9.8□□□□□ -0.84
CDH6-204ENST00000508132 ZDHHC1Q8WTX9 485 aa9.8□□□□□ -0.84
CDH6-204ENST00000508132 LGR6Q9HBX8 967 aa9.8□□□□□ -0.84
CDH6-204ENST00000508132 MIS18AQ9NYP9 233 aa9.8□□□□□ -0.84
CDH6-204ENST00000508132 BCORQ6W2J9 1755 aa9.8□□□□□ -0.84
CDH6-204ENST00000508132 VAMP4O75379 141 aa9.79□□□□□ -0.84
CDH6-204ENST00000508132 SERPINB2P05120 415 aa9.79□□□□□ -0.84
CDH6-204ENST00000508132 DOC2BQ14184 412 aa9.79□□□□□ -0.84
CDH6-204ENST00000508132 INTS5Q6P9B9 1019 aaKnown RBP9.79□□□□□ -0.84
CDH6-204ENST00000508132 SAPCD2Q86UD0 394 aa9.79□□□□□ -0.84
CDH6-204ENST00000508132 C8orf58Q8NAV2 365 aa9.79□□□□□ -0.84
CDH6-204ENST00000508132 AKAP11Q9UKA4 1901 aa9.78□□□□□ -0.84
CDH6-204ENST00000508132 H0YIN7 160 aa9.78□□□□□ -0.84
CDH6-204ENST00000508132 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
CDH6-204ENST00000508132 CDK2AP1O14519 115 aa9.78□□□□□ -0.84
CDH6-204ENST00000508132 RNMTO43148 476 aaKnown RBP9.78□□□□□ -0.84
CDH6-204ENST00000508132 FAM157BP0CG42 384 aa9.78□□□□□ -0.84
CDH6-204ENST00000508132 PHKG2P15735 406 aa9.78□□□□□ -0.84
CDH6-204ENST00000508132 TWISTNBQ3B726 338 aaPredicted RBP9.78□□□□□ -0.84
CDH6-204ENST00000508132 MAP7D1Q3KQU3 841 aa9.78□□□□□ -0.84
CDH6-204ENST00000508132 ZNF468Q5VIY5 522 aaPredicted RBP9.78□□□□□ -0.84
CDH6-204ENST00000508132 SSH1Q8WYL5 1049 aa9.78□□□□□ -0.84
CDH6-204ENST00000508132 FRAT1Q92837 279 aaPredicted RBP9.78□□□□□ -0.84
CDH6-204ENST00000508132 ZNF622Q969S3 477 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDH6-204ENST00000508132 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms