RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 PANK1Q8TE04 598 aa19.43■□□□□ 0.7
SSBP2-207ENST00000507472 EAF2Q96CJ1 260 aaPredicted RBP19.43■□□□□ 0.7
SSBP2-207ENST00000507472 TLR7Q9NYK1 1049 aaKnown RBP19.43■□□□□ 0.7
SSBP2-207ENST00000507472 DOCK2Q92608 1830 aa19.43■□□□□ 0.7
SSBP2-207ENST00000507472 ZBED9Q6R2W3 1325 aa19.43■□□□□ 0.7
SSBP2-207ENST00000507472 CAP2P40123 477 aa19.42■□□□□ 0.7
SSBP2-207ENST00000507472 PPP4CP60510 307 aa19.42■□□□□ 0.7
SSBP2-207ENST00000507472 SPP2Q13103 211 aa19.42■□□□□ 0.7
SSBP2-207ENST00000507472 RRP1BQ14684 758 aaKnown RBP19.42■□□□□ 0.7
SSBP2-207ENST00000507472 CEP85Q6P2H3 762 aa19.42■□□□□ 0.7
SSBP2-207ENST00000507472 TGFBRAP1Q8WUH2 860 aa19.42■□□□□ 0.7
SSBP2-207ENST00000507472 PIH1D3Q9NQM4 214 aaKnown RBP19.42■□□□□ 0.7
SSBP2-207ENST00000507472 SLC45A1Q9Y2W3 748 aa19.42■□□□□ 0.7
SSBP2-207ENST00000507472 PLCG2P16885 1265 aa19.41■□□□□ 0.7
SSBP2-207ENST00000507472 FCGRTP55899 365 aa19.41■□□□□ 0.7
SSBP2-207ENST00000507472 RAET1EQ8TD07 263 aa19.41■□□□□ 0.7
SSBP2-207ENST00000507472 DHX36Q9H2U1 1008 aaKnown RBP19.41■□□□□ 0.7
SSBP2-207ENST00000507472 PI4KBQ9UBF8 816 aa19.41■□□□□ 0.7
SSBP2-207ENST00000507472 HERC5Q9UII4 1024 aaKnown RBP19.41■□□□□ 0.7
SSBP2-207ENST00000507472 COL2A1P02458 1487 aaPredicted RBP19.41■□□□□ 0.7
SSBP2-207ENST00000507472 GRK4P32298 578 aa19.4■□□□□ 0.7
SSBP2-207ENST00000507472 MAPKAPK5Q8IW41 473 aa19.4■□□□□ 0.7
SSBP2-207ENST00000507472 ZNF280CQ8ND82 737 aa19.4■□□□□ 0.7
SSBP2-207ENST00000507472 SMCR8Q8TEV9 937 aaPredicted RBP19.4■□□□□ 0.7
SSBP2-207ENST00000507472 AGTPBP1Q9UPW5 1226 aa19.4■□□□□ 0.7
SSBP2-207ENST00000507472 MYPNQ86TC9 1320 aa19.4■□□□□ 0.7
SSBP2-207ENST00000507472 CEP290O15078 2479 aa19.39■□□□□ 0.69
SSBP2-207ENST00000507472 PRKCZQ05513 592 aa19.39■□□□□ 0.69
SSBP2-207ENST00000507472 MTFR1Q15390 333 aa19.39■□□□□ 0.69
SSBP2-207ENST00000507472 TREML2Q5T2D2 321 aa19.39■□□□□ 0.69
SSBP2-207ENST00000507472 EXOC6BQ9Y2D4 811 aa19.39■□□□□ 0.69
SSBP2-207ENST00000507472 IGSF3O75054 1194 aa19.38■□□□□ 0.69
SSBP2-207ENST00000507472 CYP7A1P22680 504 aa19.38■□□□□ 0.69
SSBP2-207ENST00000507472 PALD1Q9ULE6 856 aa19.38■□□□□ 0.69
SSBP2-207ENST00000507472 GABRQQ9UN88 632 aa19.38■□□□□ 0.69
SSBP2-207ENST00000507472 RBBP6Q7Z6E9 1792 aaKnown RBP19.37■□□□□ 0.69
SSBP2-207ENST00000507472 FLT1P17948 1338 aa19.37■□□□□ 0.69
SSBP2-207ENST00000507472 USP17L5A8MUK1 530 aa19.37■□□□□ 0.69
SSBP2-207ENST00000507472 IDH1O75874 414 aaKnown RBP19.37■□□□□ 0.69
SSBP2-207ENST00000507472 HMGCS2P54868 508 aa19.37■□□□□ 0.69
SSBP2-207ENST00000507472 DYNLL1P63167 89 aaKnown RBP19.37■□□□□ 0.69
SSBP2-207ENST00000507472 FOXP4Q8IVH2 680 aaPredicted RBP19.37■□□□□ 0.69
SSBP2-207ENST00000507472 PROCA1Q8NCQ7 364 aaPredicted RBP19.37■□□□□ 0.69
SSBP2-207ENST00000507472 NDUFB9Q9Y6M9 179 aa19.37■□□□□ 0.69
SSBP2-207ENST00000507472 DOCK1Q14185 1865 aa19.37■□□□□ 0.69
SSBP2-207ENST00000507472 JAG1P78504 1218 aa19.36■□□□□ 0.69
SSBP2-207ENST00000507472 AACSQ86V21 672 aa19.36■□□□□ 0.69
SSBP2-207ENST00000507472 METTL16Q86W50 562 aaKnown RBP19.36■□□□□ 0.69
SSBP2-207ENST00000507472 ERC1Q8IUD2 1116 aa19.36■□□□□ 0.69
SSBP2-207ENST00000507472 ANKRD13CQ8N6S4 541 aa19.36■□□□□ 0.69
SSBP2-207ENST00000507472 TBC1D2Q9BYX2 928 aa19.36■□□□□ 0.69
SSBP2-207ENST00000507472 DNAJC18Q9H819 358 aa19.36■□□□□ 0.69
SSBP2-207ENST00000507472 BIN2Q9UBW5 565 aaPredicted RBP19.36■□□□□ 0.69
SSBP2-207ENST00000507472 SAP30BPQ9UHR5 308 aaKnown RBP19.36■□□□□ 0.69
SSBP2-207ENST00000507472 PNMA3Q9UL41 463 aa19.36■□□□□ 0.69
SSBP2-207ENST00000507472 PHIPQ8WWQ0 1821 aa19.35■□□□□ 0.69
SSBP2-207ENST00000507472 TNPO2O14787 897 aaKnown RBP19.35■□□□□ 0.69
SSBP2-207ENST00000507472 FLT3LGP49771 235 aa19.35■□□□□ 0.69
SSBP2-207ENST00000507472 ANTXR1Q9H6X2 564 aa19.35■□□□□ 0.69
SSBP2-207ENST00000507472 IL1RAPL2Q9NP60 686 aa19.35■□□□□ 0.69
SSBP2-207ENST00000507472 PTPRFP10586 1907 aa19.34■□□□□ 0.69
SSBP2-207ENST00000507472 MS4A1P11836 297 aa19.34■□□□□ 0.69
SSBP2-207ENST00000507472 CCL5P13501 91 aa19.34■□□□□ 0.69
SSBP2-207ENST00000507472 SH3D19Q5HYK7 790 aa19.34■□□□□ 0.69
SSBP2-207ENST00000507472 CRACR2BQ8N4Y2 399 aaPredicted RBP19.34■□□□□ 0.69
SSBP2-207ENST00000507472 MAGEB6Q8N7X4 407 aa19.34■□□□□ 0.69
SSBP2-207ENST00000507472 MIGA1Q8NAN2 632 aa19.34■□□□□ 0.69
SSBP2-207ENST00000507472 WDR18Q9BV38 432 aa19.34■□□□□ 0.69
SSBP2-207ENST00000507472 AS3MTQ9HBK9 375 aa19.34■□□□□ 0.69
SSBP2-207ENST00000507472 ADCY3O60266 1144 aa19.33■□□□□ 0.68
SSBP2-207ENST00000507472 ASNSP08243 561 aa19.33■□□□□ 0.68
SSBP2-207ENST00000507472 SHROOM1Q2M3G4 852 aaPredicted RBP19.33■□□□□ 0.68
SSBP2-207ENST00000507472 HSP90AB4PQ58FF6 505 aa19.33■□□□□ 0.68
SSBP2-207ENST00000507472 SLAIN1Q8ND83 568 aa19.33■□□□□ 0.68
SSBP2-207ENST00000507472 RHPN1Q8TCX5 695 aa19.33■□□□□ 0.68
SSBP2-207ENST00000507472 SHISA4Q96DD7 197 aa19.33■□□□□ 0.68
SSBP2-207ENST00000507472 TRIM34Q9BYJ4 488 aa19.33■□□□□ 0.68
SSBP2-207ENST00000507472 RNF208Q9H0X6 261 aa19.33■□□□□ 0.68
SSBP2-207ENST00000507472 ASCC2Q9H1I8 757 aaPredicted RBP19.33■□□□□ 0.68
SSBP2-207ENST00000507472 GDF11O95390 407 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 GJB1P08034 283 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 ELNP15502 786 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 BACE1P56817 501 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 UBXN2AP68543 259 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 MAP3K12Q12852 859 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 PABPC4Q13310 644 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSBP2-207ENST00000507472 MTMR2Q13614 643 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 FAM110CQ1W6H9 321 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 COG6Q9Y2V7 657 aa19.32■□□□□ 0.68
SSBP2-207ENST00000507472 MYO5AQ9Y4I1 1855 aaKnown RBP19.32■□□□□ 0.68
SSBP2-207ENST00000507472 APBB1O00213 710 aa19.31■□□□□ 0.68
SSBP2-207ENST00000507472 HLA-DOAP06340 250 aa19.31■□□□□ 0.68
SSBP2-207ENST00000507472 USP5P45974 858 aa19.31■□□□□ 0.68
SSBP2-207ENST00000507472 GJA8P48165 433 aa19.31■□□□□ 0.68
SSBP2-207ENST00000507472 GCLCP48506 637 aaPredicted RBP19.31■□□□□ 0.68
SSBP2-207ENST00000507472 SIRT2Q8IXJ6 389 aa19.31■□□□□ 0.68
SSBP2-207ENST00000507472 NKX2-3Q8TAU0 364 aa19.31■□□□□ 0.68
SSBP2-207ENST00000507472 COA7Q96BR5 231 aa19.31■□□□□ 0.68
SSBP2-207ENST00000507472 ZBTB40Q9NUA8 1239 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms