RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
CCHCR1-222ENST00000507459 CRACR2BQ8N4Y2 399 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-222ENST00000507459 RIOK1Q9BRS2 568 aaKnown RBP17.12■□□□□ 0.33
CCHCR1-222ENST00000507459 CFHR5Q9BXR6 569 aa17.12■□□□□ 0.33
CCHCR1-222ENST00000507459 TRIM34Q9BYJ4 488 aa17.12■□□□□ 0.33
CCHCR1-222ENST00000507459 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-222ENST00000507459 CDK5RAP2Q96SN8 1893 aa17.12■□□□□ 0.33
CCHCR1-222ENST00000507459 TCRBV5S4A2TA0A5A2 114 aa17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 BTBD19C9JJ37 291 aa17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 CHGBP05060 677 aa17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 HLA-DOAP06340 250 aa17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 PTPRAP18433 802 aa17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 ADD2P35612 726 aa17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 HDAC1Q13547 482 aaPredicted RBP17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 TAF1CQ15572 869 aaPredicted RBP17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 CCDC84Q86UT8 332 aaPredicted RBP17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 MCOLN1Q9GZU1 580 aa17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-222ENST00000507459 FKTNO75072 461 aa17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 AAMPQ13685 434 aa17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 FOXP4Q8IVH2 680 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 LCORLQ8N3X6 602 aa17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 CRNKL1Q9BZJ0 848 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 KCNH4Q9UQ05 1017 aa17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 LAMB1P07942 1786 aa17.1■□□□□ 0.33
CCHCR1-222ENST00000507459 CAP2P40123 477 aa17.09■□□□□ 0.33
CCHCR1-222ENST00000507459 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
CCHCR1-222ENST00000507459 ZSCAN25Q6NSZ9 544 aa17.09■□□□□ 0.33
CCHCR1-222ENST00000507459 ABHD8Q96I13 439 aa17.09■□□□□ 0.33
CCHCR1-222ENST00000507459 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
CCHCR1-222ENST00000507459 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
CCHCR1-222ENST00000507459 FOCADQ5VW36 1801 aa17.09■□□□□ 0.33
CCHCR1-222ENST00000507459 TTC41PQ6P2S7 1318 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 CXCL11O14625 94 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 MBD4O95243 580 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 POLR3DP05423 398 aaPredicted RBP17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 UBE3CQ15386 1083 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 NOM1Q5C9Z4 860 aaKnown RBP17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 CTU1Q7Z7A3 348 aaKnown RBP17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 SDR42E1Q8WUS8 393 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 DNAJC18Q9H819 358 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 MYH1P12882 1939 aa17.08■□□□□ 0.32
CCHCR1-222ENST00000507459 ERC2O15083 957 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 MX1P20591 662 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 B4GALNT3Q6L9W6 998 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 GADL1Q6ZQY3 521 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 TTC6Q86TZ1 520 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 KBTBD3Q8NAB2 608 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 MCM9Q9NXL9 1143 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 DOCK1Q14185 1865 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 SIPA1L1O43166 1804 aa17.07■□□□□ 0.32
CCHCR1-222ENST00000507459 PDHXO00330 501 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 PRKAB2O43741 272 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 GDF11O95390 407 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 IGHDP01880 384 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 PLCD1P51178 756 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 MOGSQ13724 837 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 ANKRD23Q86SG2 305 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 METTL16Q86W50 562 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 PUS7LQ9H0K6 701 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 SERPINB13Q9UIV8 391 aa17.06■□□□□ 0.32
CCHCR1-222ENST00000507459 A0A0G2JLL6 359 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 JAG1P78504 1218 aa17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 SP3Q02447 781 aa17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 SPP2Q13103 211 aa17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 SHROOM1Q2M3G4 852 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 FASTKD5Q7L8L6 764 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 PRRT2Q7Z6L0 340 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 DCP1AQ9NPI6 582 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-222ENST00000507459 MYH7P12883 1935 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 CCDC85CA6NKD9 419 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 USP17L5A8MUK1 530 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 ASNSP08243 561 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 EVX2Q03828 476 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 GPAT2Q6NUI2 795 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 ZNF280CQ8ND82 737 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 SLC4A4Q9Y6R1 1079 aa17.04■□□□□ 0.32
CCHCR1-222ENST00000507459 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 TLR2O60603 784 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 CYP2D6P10635 497 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 SMC5Q8IY18 1101 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 EHD4Q9H223 541 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 TRIM17Q9Y577 477 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 ATAD5Q96QE3 1844 aa17.03■□□□□ 0.32
CCHCR1-222ENST00000507459 SALL3Q9BXA9 1300 aa17.02■□□□□ 0.32
CCHCR1-222ENST00000507459 NAV1Q8NEY1 1877 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms