RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 MIGA1Q8NAN2 632 aa20.46■□□□□ 0.87
PDLIM7-215ENST00000506161 TGFBRAP1Q8WUH2 860 aa20.46■□□□□ 0.87
PDLIM7-215ENST00000506161 ZHX2Q9Y6X8 837 aa20.46■□□□□ 0.87
PDLIM7-215ENST00000506161 FLT1P17948 1338 aa20.46■□□□□ 0.87
PDLIM7-215ENST00000506161 RBBP6Q7Z6E9 1792 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-215ENST00000506161 IDH1O75874 414 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-215ENST00000506161 CYP7A1P22680 504 aa20.45■□□□□ 0.86
PDLIM7-215ENST00000506161 SLC4A8Q2Y0W8 1093 aa20.45■□□□□ 0.86
PDLIM7-215ENST00000506161 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
PDLIM7-215ENST00000506161 MAGEB6Q8N7X4 407 aa20.45■□□□□ 0.86
PDLIM7-215ENST00000506161 ZFYVE28Q9HCC9 887 aa20.45■□□□□ 0.86
PDLIM7-215ENST00000506161 AFG3L2Q9Y4W6 797 aa20.45■□□□□ 0.86
PDLIM7-215ENST00000506161 SMARCA5O60264 1052 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-215ENST00000506161 TBC1D12O60347 775 aa20.44■□□□□ 0.86
PDLIM7-215ENST00000506161 TLR2O60603 784 aa20.44■□□□□ 0.86
PDLIM7-215ENST00000506161 CHGBP05060 677 aa20.44■□□□□ 0.86
PDLIM7-215ENST00000506161 ANKRD23Q86SG2 305 aa20.44■□□□□ 0.86
PDLIM7-215ENST00000506161 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
PDLIM7-215ENST00000506161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.44■□□□□ 0.862e-6■■■■■ 52.9
PDLIM7-215ENST00000506161 CPA4Q9UI42 421 aa20.44■□□□□ 0.86
PDLIM7-215ENST00000506161 BAZ2AQ9UIF9 1905 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-215ENST00000506161 A0A0G2JLL6 359 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 PDHXO00330 501 aa20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 CTNND1O60716 968 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 EVX2Q03828 476 aa20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 PRRT2Q7Z6L0 340 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 ERO1AQ96HE7 468 aa20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 SAP30BPQ9UHR5 308 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 PALD1Q9ULE6 856 aa20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 PTPN22Q9Y2R2 807 aa20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 DOCK3Q8IZD9 2030 aa20.43■□□□□ 0.86
PDLIM7-215ENST00000506161 MKI67P46013 3256 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-215ENST00000506161 MAP4K4O95819 1239 aaPredicted RBP20.42■□□□□ 0.86
PDLIM7-215ENST00000506161 CYP2C8P10632 490 aa20.42■□□□□ 0.86
PDLIM7-215ENST00000506161 C17orf99Q6UX52 265 aa20.42■□□□□ 0.86
PDLIM7-215ENST00000506161 CXCL11O14625 94 aa20.41■□□□□ 0.86
PDLIM7-215ENST00000506161 HSP90AB4PQ58FF6 505 aa20.41■□□□□ 0.86
PDLIM7-215ENST00000506161 CLASRPQ8N2M8 674 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-215ENST00000506161 RIOK1Q9BRS2 568 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-215ENST00000506161 EFCC1Q9HA90 598 aa20.41■□□□□ 0.86
PDLIM7-215ENST00000506161 ZCCHC17Q9NP64 241 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-215ENST00000506161 PICK1Q9NRD5 415 aa20.41■□□□□ 0.86
PDLIM7-215ENST00000506161 TRIM75PA6NK02 468 aa20.4■□□□□ 0.86
PDLIM7-215ENST00000506161 HMMRO75330 724 aa20.4■□□□□ 0.86
PDLIM7-215ENST00000506161 BAG3O95817 575 aa20.4■□□□□ 0.86
PDLIM7-215ENST00000506161 EN2P19622 333 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-215ENST00000506161 CAP2P40123 477 aa20.4■□□□□ 0.86
PDLIM7-215ENST00000506161 DNAJC2Q99543 621 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-215ENST00000506161 PTCH2Q9Y6C5 1203 aa20.4■□□□□ 0.86
PDLIM7-215ENST00000506161 TCRBV5S4A2TA0A5A2 114 aa20.39■□□□□ 0.85
PDLIM7-215ENST00000506161 GOLIM4O00461 696 aa20.39■□□□□ 0.85
PDLIM7-215ENST00000506161 RAB11FIP3O75154 756 aa20.39■□□□□ 0.85
PDLIM7-215ENST00000506161 TREML2Q5T2D2 321 aa20.39■□□□□ 0.85
PDLIM7-215ENST00000506161 GADL1Q6ZQY3 521 aa20.39■□□□□ 0.85
PDLIM7-215ENST00000506161 METTL16Q86W50 562 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-215ENST00000506161 NOL10Q9BSC4 688 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-215ENST00000506161 COLQQ9Y215 455 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-215ENST00000506161 CENPFP49454 3210 aa20.38■□□□□ 0.85
PDLIM7-215ENST00000506161 MYH8P13535 1937 aa20.38■□□□□ 0.85
PDLIM7-215ENST00000506161 PDE6AP16499 860 aa20.38■□□□□ 0.85
PDLIM7-215ENST00000506161 LACTBP83111 547 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-215ENST00000506161 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDLIM7-215ENST00000506161 ARMC5Q96C12 935 aa20.38■□□□□ 0.85
PDLIM7-215ENST00000506161 BOLA2Q9H3K6 86 aa20.38■□□□□ 0.85
PDLIM7-215ENST00000506161 PCDHB15Q9Y5E8 787 aa20.38■□□□□ 0.85
PDLIM7-215ENST00000506161 GDF11O95390 407 aa20.37■□□□□ 0.85
PDLIM7-215ENST00000506161 IFIT2P09913 472 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-215ENST00000506161 BCRP11274 1271 aa20.37■□□□□ 0.85
PDLIM7-215ENST00000506161 PLCG2P16885 1265 aa20.37■□□□□ 0.85
PDLIM7-215ENST00000506161 YTHDC1Q96MU7 727 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-215ENST00000506161 PI4KBQ9UBF8 816 aa20.37■□□□□ 0.85
PDLIM7-215ENST00000506161 ZNF532Q9HCE3 1301 aa20.36■□□□□ 0.85
PDLIM7-215ENST00000506161 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
PDLIM7-215ENST00000506161 SPP2Q13103 211 aa20.36■□□□□ 0.85
PDLIM7-215ENST00000506161 TRIM47Q96LD4 638 aa20.36■□□□□ 0.85
PDLIM7-215ENST00000506161 HERC5Q9UII4 1024 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-215ENST00000506161 PLXNB2O15031 1838 aa20.36■□□□□ 0.85
PDLIM7-215ENST00000506161 SMIM22K7EJ46 135 aa20.35■□□□□ 0.85
PDLIM7-215ENST00000506161 RRP1P56182 461 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-215ENST00000506161 TSHZ3Q63HK5 1081 aa20.35■□□□□ 0.85
PDLIM7-215ENST00000506161 LCORLQ8N3X6 602 aa20.35■□□□□ 0.85
PDLIM7-215ENST00000506161 TMEM106CQ9BVX2 250 aa20.35■□□□□ 0.85
PDLIM7-215ENST00000506161 DHX36Q9H2U1 1008 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-215ENST00000506161 ATP5JP18859 108 aa20.34■□□□□ 0.85
PDLIM7-215ENST00000506161 PLCD1P51178 756 aa20.34■□□□□ 0.85
PDLIM7-215ENST00000506161 SLC9C2Q5TAH2 1124 aa20.34■□□□□ 0.85
PDLIM7-215ENST00000506161 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
PDLIM7-215ENST00000506161 DCTPP1Q9H773 170 aa20.34■□□□□ 0.85
PDLIM7-215ENST00000506161 KIAA0100Q14667 2235 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-215ENST00000506161 IGSF3O75054 1194 aa20.33■□□□□ 0.85
PDLIM7-215ENST00000506161 HMGCS2P54868 508 aa20.33■□□□□ 0.85
PDLIM7-215ENST00000506161 ZNF280CQ8ND82 737 aa20.33■□□□□ 0.85
PDLIM7-215ENST00000506161 SDR42E1Q8WUS8 393 aa20.33■□□□□ 0.85
PDLIM7-215ENST00000506161 HAUS7Q99871 368 aa20.33■□□□□ 0.85
PDLIM7-215ENST00000506161 PAG1Q9NWQ8 432 aa20.33■□□□□ 0.85
PDLIM7-215ENST00000506161 BRCA2P51587 3418 aa20.33■□□□□ 0.84
PDLIM7-215ENST00000506161 USP17L5A8MUK1 530 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 PRKAB2O43741 272 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 PEX10O60683 326 aa20.32■□□□□ 0.84
PDLIM7-215ENST00000506161 CYP2D6P10635 497 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms