RNA–Protein interactions for RNA: ENST00000506031.2

GAPDHP56-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 56, humanhuman

BASIC

Gene GAPDHP56, Length 988 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP56-201ENST00000506031 HSH2DQ96JZ2 352 aa6.52□□□□□ -1.37
GAPDHP56-201ENST00000506031 SUSD3Q96L08 255 aa6.52□□□□□ -1.37
GAPDHP56-201ENST00000506031 C1orf115Q9H7X2 142 aa6.52□□□□□ -1.37
GAPDHP56-201ENST00000506031 KIAA1551Q9HCM1 1747 aa6.52□□□□□ -1.37
GAPDHP56-201ENST00000506031 N4BP2Q86UW6 1770 aaPredicted RBP6.52□□□□□ -1.37
GAPDHP56-201ENST00000506031 SOS1Q07889 1333 aaPredicted RBP6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 USP42Q9H9J4 1324 aaKnown RBP6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 A0A087WZG4 1122 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 TM4SF1P30408 202 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 IL6STP40189 918 aaPredicted RBP6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 EIF5P55010 431 aaKnown RBP6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 TGFB2P61812 414 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 PBXIP1Q96AQ6 731 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 SPOCK3Q9BQ16 436 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 ENAMQ9NRM1 1142 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 MARK1Q9P0L2 795 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 ANKIB1Q9P2G1 1089 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 NARFQ9UHQ1 456 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 GDF2Q9UK05 429 aaPredicted RBP6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 BCORQ6W2J9 1755 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 CCDC88AQ3V6T2 1871 aa6.51□□□□□ -1.37
GAPDHP56-201ENST00000506031 MAPK8IP3Q9UPT6 1336 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 SBF1O95248 1867 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 SHISA8B8ZZ34 492 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 GRIN3BO60391 1043 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 SNRPA1P09661 255 aaKnown RBP6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 ARAFP10398 606 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 TMPOP42166 694 aaKnown RBP6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 LMOD3Q0VAK6 560 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 SFSWAPQ12872 951 aaKnown RBP6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 GRIN2CQ14957 1233 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 SWI5Q1ZZU3 235 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 MCM10Q7L590 875 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 CCDC82Q8N4S0 544 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 GOLGA6L1Q8N7Z2 621 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 RUNDC1Q96C34 613 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 KLF15Q9UIH9 416 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 GGA1Q9UJY5 639 aa6.5□□□□□ -1.37
GAPDHP56-201ENST00000506031 DLEC1Q9Y238 1755 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 COL15A1P39059 1388 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 PHF20L1A8MW92 1017 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 KCNQ3O43525 872 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 MMP10P09238 476 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 RIPK4P57078 832 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 DCTN1Q14203 1278 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 RTN1Q16799 776 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 TMEM164Q5U3C3 297 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 MSL1Q68DK7 614 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 CLEC4GQ6UXB4 293 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 SLCO4C1Q6ZQN7 724 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 SMIM5Q71RC9 77 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 NEDD1Q8NHV4 660 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 EDARADDQ8WWZ3 215 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 PRIMPOLQ96LW4 560 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 ZBTB1Q9Y2K1 713 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 USP16Q9Y5T5 823 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 SCN7AQ01118 1682 aa6.49□□□□□ -1.37
GAPDHP56-201ENST00000506031 ANKRD31Q8N7Z5 1873 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 NEURL1BA8MQ27 555 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 EIF4A1P60842 406 aaKnown RBP6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 TYRO3Q06418 890 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 WDR43Q15061 677 aaKnown RBP eCLIP6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 OCLNQ16625 522 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 USPL1Q5W0Q7 1092 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 NLGN2Q8NFZ4 835 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 CEP63Q96MT8 703 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 BRD7Q9NPI1 651 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 AVENQ9NQS1 362 aaPredicted RBP6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 BCS1LQ9Y276 419 aa6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 DICER1Q9UPY3 1922 aaKnown RBP6.48□□□□□ -1.37
GAPDHP56-201ENST00000506031 POLRMTO00411 1230 aaKnown RBP6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 CHL1O00533 1208 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 PRMT3O60678 531 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 A1BGP04217 495 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 EPXP11678 715 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 CANXP27824 592 aaKnown RBP6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 FKBP5Q13451 457 aaPredicted RBP6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 GPR162Q16538 588 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 HIF1AQ16665 826 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 ZNF468Q5VIY5 522 aaPredicted RBP6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 PODNQ7Z5L7 613 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 BTLAQ7Z6A9 289 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 NPM2Q86SE8 214 aaKnown RBP6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 SLC30A3Q99726 388 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 SRP68Q9UHB9 627 aaKnown RBP6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 PRR12Q9ULL5 1215 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 C10orf71Q711Q0 1435 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 CNTNAP5Q8WYK1 1306 aa6.47□□□□□ -1.37
GAPDHP56-201ENST00000506031 ARFGEF2Q9Y6D5 1785 aa6.46□□□□□ -1.37
GAPDHP56-201ENST00000506031 K7ELQ4 463 aaPredicted RBP6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 ANP32CO43423 234 aa6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 YY1P25490 414 aa6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 ADH6P28332 368 aa6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 PCBP4P57723 403 aaKnown RBP6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 DDR1Q08345 913 aa6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 NFIXQ14938 502 aa6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 IER5Q5VY09 327 aa6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 FCHSD1Q86WN1 690 aa6.46□□□□□ -1.38
GAPDHP56-201ENST00000506031 MYO19Q96H55 970 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms