RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 USP17L12C9JPN9 530 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 USP17L21D6R901 530 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 POLR3DP05423 398 aaPredicted RBP12.2□□□□□ -0.46
RFC1-210ENST00000505077 ZKSCAN1P17029 563 aaPredicted RBP12.2□□□□□ -0.46
RFC1-210ENST00000505077 PPARAQ07869 468 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 TCP10Q12799 353 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 NECTIN1Q15223 517 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 CDC37L1Q7L3B6 337 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 ZNF526Q8TF50 670 aaPredicted RBP12.2□□□□□ -0.46
RFC1-210ENST00000505077 CSRNP1Q96S65 589 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 USP26Q9BXU7 913 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 RNF41Q9H4P4 317 aaPredicted RBP12.2□□□□□ -0.46
RFC1-210ENST00000505077 SWAP70Q9UH65 585 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 SERPINB13Q9UIV8 391 aa12.2□□□□□ -0.46
RFC1-210ENST00000505077 SSC5DA1L4H1 1573 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 ZNF213O14771 459 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 TBC1D12O60347 775 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 HSPA4P34932 840 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 ANAPC15P60006 121 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 KRT32Q14532 448 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 SUPT20HL1Q3ZLR7 823 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 METTL16Q86W50 562 aaKnown RBP12.19□□□□□ -0.46
RFC1-210ENST00000505077 FOXP4Q8IVH2 680 aaPredicted RBP12.19□□□□□ -0.46
RFC1-210ENST00000505077 ZSCAN29Q8IWY8 852 aaPredicted RBP12.19□□□□□ -0.46
RFC1-210ENST00000505077 TEPSINQ96N21 525 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 TMEM39BQ9GZU3 492 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 PALD1Q9ULE6 856 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
RFC1-210ENST00000505077 NF2P35240 595 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 PDE4BQ07343 736 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 DCAF15Q66K64 600 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 CREB3L3Q68CJ9 461 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 C16orf86Q6ZW13 317 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 IL27Q8NEV9 243 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 STAG1Q8WVM7 1258 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 KCNB2Q92953 911 aa12.18□□□□□ -0.46
RFC1-210ENST00000505077 SAP30BPQ9UHR5 308 aaKnown RBP12.18□□□□□ -0.46
RFC1-210ENST00000505077 DDTLA6NHG4 134 aaPredicted RBP12.17□□□□□ -0.46
RFC1-210ENST00000505077 MINDY4BA8MYZ0 360 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 SLC27A2O14975 620 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 ORC4O43929 436 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 CYP21A2P08686 494 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 FGRP09769 529 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 GABPAQ06546 454 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 ZFPM1Q8IX07 1006 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 CRACR2BQ8N4Y2 399 aaPredicted RBP12.17□□□□□ -0.46
RFC1-210ENST00000505077 IL17RAQ96F46 866 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 PLIN4Q96Q06 1357 aa12.17□□□□□ -0.46
RFC1-210ENST00000505077 MYH6P13533 1939 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 ADM5C9JUS6 153 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 KIF3CO14782 793 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 TOMM70O94826 608 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 SEC24BO95487 1268 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 RBM25P49756 843 aaKnown RBP12.16□□□□□ -0.46
RFC1-210ENST00000505077 PLCD1P51178 756 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 TRDNQ13061 729 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 MFSD6Q6ZSS7 791 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 ZNF784Q8NCA9 323 aaPredicted RBP12.16□□□□□ -0.46
RFC1-210ENST00000505077 SMC1BQ8NDV3 1235 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 RBM46Q8TBY0 533 aaKnown RBP12.16□□□□□ -0.46
RFC1-210ENST00000505077 CDCA5Q96FF9 252 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 KRT23Q9C075 422 aa12.16□□□□□ -0.46
RFC1-210ENST00000505077 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.16□□□□□ -0.46
RFC1-210ENST00000505077 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 UNCXA6NJT0 531 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
RFC1-210ENST00000505077 HMGB1P09429 215 aaKnown RBP12.15□□□□□ -0.46
RFC1-210ENST00000505077 CYP2D6P10635 497 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 HAND2P61296 217 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 FKBP1BP68106 108 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
RFC1-210ENST00000505077 TATDN1Q6P1N9 297 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 RALYLQ86SE5 291 aaKnown RBP12.15□□□□□ -0.46
RFC1-210ENST00000505077 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 CCDC17Q96LX7 622 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 TBC1D32Q96NH3 1257 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 ZNF341Q9BYN7 854 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
RFC1-210ENST00000505077 C22orf23Q9BZE7 217 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 LOC285556D6RIA3 1793 aa12.15□□□□□ -0.46
RFC1-210ENST00000505077 WDR19Q8NEZ3 1342 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 E7EWF7 191 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 PSMA5P28066 241 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 CDK8P49336 464 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 FSTL1Q12841 308 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
RFC1-210ENST00000505077 NBPF12Q5TAG4 269 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms