RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	AATF	Q9NY61	560 aa	Known RBP eCLIP	20	■□□□□ 0.79
DDR1-256	ENST00000505066	TAOK2	Q9UL54	1235 aa		20	■□□□□ 0.79
DDR1-256	ENST00000505066	AK9	Q5TCS8	1911 aa		20	■□□□□ 0.79
DDR1-256	ENST00000505066	CAP2	P40123	477 aa		19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	GCLC	P48506	637 aa	Predicted RBP	19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	SPP2	Q13103	211 aa		19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	FOXP4	Q8IVH2	680 aa	Predicted RBP	19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	CCAR1	Q8IX12	1150 aa	Known RBP	19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	ZNF512B	Q96KM6	892 aa	Predicted RBP	19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	DBNDD2	Q9BQY9	259 aa		19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	HTATIP2	Q9BUP3	242 aa		19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	RNF208	Q9H0X6	261 aa		19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	TNN	Q9UQP3	1299 aa		19.99	■□□□□ 0.79
DDR1-256	ENST00000505066	LAMB1	P07942	1786 aa		19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	RFX7	Q2KHR2	1363 aa		19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	ASNS	P08243	561 aa		19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	BCR	P11274	1271 aa		19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	MOGS	Q13724	837 aa		19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	TMED8	Q6PL24	325 aa	Predicted RBP	19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	C1orf115	Q9H7X2	142 aa		19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	GINM1	Q9NU53	330 aa		19.98	■□□□□ 0.79
DDR1-256	ENST00000505066	ADCY3	O60266	1144 aa		19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	IDH1	O75874	414 aa	Known RBP	19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	IRX3	P78415	501 aa	Predicted RBP	19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	CAP1	Q01518	475 aa		19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	PRKCZ	Q05513	592 aa		19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	MAP3K12	Q12852	859 aa		19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	MAPKAPK5	Q8IW41	473 aa		19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	TGFBRAP1	Q8WUH2	860 aa		19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	DPF3	Q92784	378 aa		19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	COL2A1	P02458	1487 aa	Predicted RBP	19.97	■□□□□ 0.79
DDR1-256	ENST00000505066	FAM196B	A6NMK8	535 aa		19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	HMMR	O75330	724 aa		19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	CCL5	P13501	91 aa		19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	CYP7A1	P22680	504 aa		19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	USP5	P45974	858 aa		19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	PPP4C	P60510	307 aa		19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	ANKRD13C	Q8N6S4	541 aa		19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	CWC22	Q9HCG8	908 aa	Known RBP	19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	NOP58	Q9Y2X3	529 aa	Known RBP	19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	ADGRA2	Q96PE1	1338 aa		19.96	■□□□□ 0.79
DDR1-256	ENST00000505066	GJB1	P08034	283 aa		19.95	■□□□□ 0.78
DDR1-256	ENST00000505066	HMGCS2	P54868	508 aa		19.95	■□□□□ 0.78
DDR1-256	ENST00000505066	FAM110C	Q1W6H9	321 aa		19.95	■□□□□ 0.78
DDR1-256	ENST00000505066	MIER1	Q8N108	512 aa		19.95	■□□□□ 0.78
DDR1-256	ENST00000505066	C19orf81	C9J6K1	198 aa		19.94	■□□□□ 0.78
DDR1-256	ENST00000505066	ZBTB7B	O15156	539 aa	Predicted RBP	19.94	■□□□□ 0.78
DDR1-256	ENST00000505066	ZAP70	P43403	619 aa		19.94	■□□□□ 0.78
DDR1-256	ENST00000505066	FLT3LG	P49771	235 aa		19.94	■□□□□ 0.78
DDR1-256	ENST00000505066	TTF1	Q15361	905 aa	Predicted RBP	19.94	■□□□□ 0.78
DDR1-256	ENST00000505066	PXYLP1	Q8TE99	480 aa		19.94	■□□□□ 0.78
DDR1-256	ENST00000505066	CCDC8	Q9H0W5	538 aa	Predicted RBP	19.94	■□□□□ 0.78
DDR1-256	ENST00000505066	NR2E3	Q9Y5X4	410 aa		19.94	■□□□□ 0.78
DDR1-256	ENST00000505066	CYP2E1	P05181	493 aa	Predicted RBP	19.93	■□□□□ 0.78
DDR1-256	ENST00000505066	AACS	Q86V21	672 aa		19.93	■□□□□ 0.78
DDR1-256	ENST00000505066	ZNF384	Q8TF68	577 aa		19.93	■□□□□ 0.78
DDR1-256	ENST00000505066	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	19.93	■□□□□ 0.78
DDR1-256	ENST00000505066	TFRC	P02786	760 aa	Known RBP	19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	GJA8	P48165	433 aa		19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	IRF5	Q13568	498 aa		19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	MTFR1	Q15390	333 aa		19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	TTC6	Q86TZ1	520 aa		19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	CCDC84	Q86UT8	332 aa	Predicted RBP	19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	CLASRP	Q8N2M8	674 aa	Known RBP	19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	GTF3C2	Q8WUA4	911 aa	Predicted RBP	19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	PALD1	Q9ULE6	856 aa		19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	FLT1	P17948	1338 aa		19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	ZBED9	Q6R2W3	1325 aa		19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	MYH2	Q9UKX2	1941 aa		19.92	■□□□□ 0.78
DDR1-256	ENST00000505066	USP17L10	C9JJH3	530 aa		19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	CTGF	P29279	349 aa		19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	BACE1	P56817	501 aa		19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	PDE3A	Q14432	1141 aa		19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	HABP4	Q5JVS0	413 aa	Known RBP	19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	TREML2	Q5T2D2	321 aa		19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	FEZ1	Q99689	392 aa		19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	WDR18	Q9BV38	432 aa		19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	CABP5	Q9NP86	173 aa		19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	SAP30BP	Q9UHR5	308 aa	Known RBP	19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	DBNL	Q9UJU6	430 aa	Known RBP	19.91	■□□□□ 0.78
DDR1-256	ENST00000505066	IFIT2	P09913	472 aa	Known RBP	19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	MTMR2	Q13614	643 aa		19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	SH3D19	Q5HYK7	790 aa		19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	CEP85	Q6P2H3	762 aa		19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	MAGEB6	Q8N7X4	407 aa		19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	U2AF1L4	Q8WU68	220 aa	Known RBP	19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	ASCC2	Q9H1I8	757 aa	Predicted RBP	19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	GABRQ	Q9UN88	632 aa		19.9	■□□□□ 0.78
DDR1-256	ENST00000505066	FARP2	O94887	1054 aa	Predicted RBP	19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	INHA	P05111	366 aa		19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	SLURP2	P0DP57	97 aa		19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	MIGA1	Q8NAN2	632 aa		19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	EAF2	Q96CJ1	260 aa	Predicted RBP	19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	BCL11A	Q9H165	835 aa		19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	PIH1D3	Q9NQM4	214 aa	Known RBP	19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	DDX19B	Q9UMR2	479 aa		19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	EXOC6B	Q9Y2D4	811 aa		19.89	■□□□□ 0.77
DDR1-256	ENST00000505066	KIAA0100	Q14667	2235 aa	Known RBP	19.88	■□□□□ 0.77

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