RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 DBF4Q9UBU7 674 aaPredicted RBP6.29□□□□□ -1.4
CDH9-203ENST00000505045 DOLKQ9UPQ8 538 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 ZNF646O15015 1829 aaPredicted RBP6.29□□□□□ -1.4
CDH9-203ENST00000505045 RNF123Q5XPI4 1314 aa6.29□□□□□ -1.4
CDH9-203ENST00000505045 CDC14CA4D256 554 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 MYCP01106 439 aaPredicted RBP6.28□□□□□ -1.4
CDH9-203ENST00000505045 VEGFAP15692 232 aaPredicted RBP6.28□□□□□ -1.4
CDH9-203ENST00000505045 IARSP41252 1262 aaKnown RBP6.28□□□□□ -1.4
CDH9-203ENST00000505045 GNAI1P63096 354 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 DBN1Q16643 649 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 SLC10A5Q5PT55 438 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 SOGA3Q5TF21 947 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 PPP1R42Q7Z4L9 355 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 C16orf71Q8IYS4 520 aaPredicted RBP6.28□□□□□ -1.4
CDH9-203ENST00000505045 DNAJC5GQ8N7S2 189 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 PLBD2Q8NHP8 589 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 FAM89AQ96GI7 184 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 ALG2Q9H553 416 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 TRMT112Q9UI30 125 aaKnown RBP6.28□□□□□ -1.4
CDH9-203ENST00000505045 SH3TC1Q8TE82 1336 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 FANCIQ9NVI1 1328 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 CACNA1FO60840 1977 aa6.28□□□□□ -1.4
CDH9-203ENST00000505045 FZD9O00144 591 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 ALDH1B1P30837 517 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 USP4Q13107 963 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 JARID2Q92833 1246 aaPredicted RBP6.27□□□□□ -1.41
CDH9-203ENST00000505045 POM121Q96HA1 1249 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 CRAMP1Q96RY5 1269 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 PSMD1Q99460 953 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 ETNK1Q9HBU6 452 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 PSME4Q14997 1843 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 FSTL1Q12841 308 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 AOC3Q16853 763 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 MAP7D1Q3KQU3 841 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 HSP90AB3PQ58FF7 597 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 G2E3Q7L622 706 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 RTKN2Q8IZC4 609 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 SMC1BQ8NDV3 1235 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 CELF1Q92879 486 aaKnown RBP6.27□□□□□ -1.41
CDH9-203ENST00000505045 RBM17Q96I25 401 aaKnown RBP6.27□□□□□ -1.41
CDH9-203ENST00000505045 HYPKQ9NX55 129 aa6.27□□□□□ -1.41
CDH9-203ENST00000505045 ANP32CO43423 234 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 COBLO75128 1261 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 STAU1O95793 577 aaKnown RBP6.26□□□□□ -1.41
CDH9-203ENST00000505045 THBS1P07996 1170 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 SCNN1DP51172 638 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 CCDC27Q2M243 656 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 TAS1R3Q7RTX0 852 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 PLPP7Q8NBV4 271 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 GPR101Q96P66 508 aaPredicted RBP6.26□□□□□ -1.41
CDH9-203ENST00000505045 MYD88Q99836 296 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 TAF1DQ9H5J8 278 aaPredicted RBP6.26□□□□□ -1.41
CDH9-203ENST00000505045 ATP6V0A2Q9Y487 856 aa6.26□□□□□ -1.41
CDH9-203ENST00000505045 PHF20L1A8MW92 1017 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 PPIP5K2O43314 1243 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 IGKV5-2P06315 115 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 GRAPQ13588 217 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 TWISTNBQ3B726 338 aaPredicted RBP6.25□□□□□ -1.41
CDH9-203ENST00000505045 OXLD1Q5BKU9 147 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 GRAPLQ8TC17 118 aaPredicted RBP6.25□□□□□ -1.41
CDH9-203ENST00000505045 SEC31BQ9NQW1 1179 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 MAP3K2Q9Y2U5 619 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 TRPM7Q96QT4 1865 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 SHTN1A0MZ66 631 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 PI4KAP2A4QPH2 592 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 YDJCA8MPS7 323 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 PIK3CDO00329 1044 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 IRS4O14654 1257 aaPredicted RBP6.25□□□□□ -1.41
CDH9-203ENST00000505045 CALD1Q05682 793 aaKnown RBP6.25□□□□□ -1.41
CDH9-203ENST00000505045 FMR1Q06787 632 aaKnown RBP eCLIP6.25□□□□□ -1.41
CDH9-203ENST00000505045 SEMA3FQ13275 785 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 CWF19L2Q2TBE0 894 aaKnown RBP6.25□□□□□ -1.41
CDH9-203ENST00000505045 FAM9BQ8IZU0 186 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 LARGE2Q8N3Y3 721 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 PI4KAP1Q8N8J0 262 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 RTFDC1Q9BY42 306 aaPredicted RBP6.25□□□□□ -1.41
CDH9-203ENST00000505045 TIMMDC1Q9NPL8 285 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 GJA3Q9Y6H8 435 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 PASKQ96RG2 1323 aa6.25□□□□□ -1.41
CDH9-203ENST00000505045 WTIPA6NIX2 430 aaPredicted RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 EPHX2P34913 555 aa6.24□□□□□ -1.41
CDH9-203ENST00000505045 EPS15P42566 896 aa6.24□□□□□ -1.41
CDH9-203ENST00000505045 SRSF11Q05519 484 aaKnown RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 FLIIQ13045 1269 aa6.24□□□□□ -1.41
CDH9-203ENST00000505045 TRIM28Q13263 835 aaKnown RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 SF3B3Q15393 1217 aaKnown RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 EAPPQ56P03 285 aaPredicted RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 CCDC30Q5VVM6 783 aa6.24□□□□□ -1.41
CDH9-203ENST00000505045 DPP8Q6V1X1 898 aaPredicted RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 DDX46Q7L014 1031 aaKnown RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 GPC2Q8N158 579 aa6.24□□□□□ -1.41
CDH9-203ENST00000505045 ZBTB38Q8NAP3 1195 aaPredicted RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 KLRG1Q96E93 195 aa6.24□□□□□ -1.41
CDH9-203ENST00000505045 ZSCAN10Q96SZ4 725 aaPredicted RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 METTL22Q9BUU2 404 aaPredicted RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 ZNF521Q96K83 1311 aa6.24□□□□□ -1.41
CDH9-203ENST00000505045 POLR2AP24928 1970 aaKnown RBP6.24□□□□□ -1.41
CDH9-203ENST00000505045 THSD7BQ9C0I4 1608 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 RTL9Q8NET4 1388 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 IL16Q14005 1332 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms