RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 EOMESO95936 686 aa8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 PRKCQQ04759 706 aa8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 PLCL1Q15111 1095 aa8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 IFI16Q16666 785 aaKnown RBP8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 STK11IPQ8N1F8 1099 aa8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 MISP3Q96FF7 219 aa8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 PRDM10Q9NQV6 1147 aa8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 VAV3Q9UKW4 847 aa8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 CARMIL2Q6F5E8 1435 aa8.69□□□□□ -1.02
DEPDC1B-203ENST00000505017 FANCGO15287 622 aa8.68□□□□□ -1.02
DEPDC1B-203ENST00000505017 RNASE1P07998 156 aaKnown RBP8.68□□□□□ -1.02
DEPDC1B-203ENST00000505017 ATP2B2Q01814 1243 aa8.68□□□□□ -1.02
DEPDC1B-203ENST00000505017 OGFOD2Q6N063 350 aa8.68□□□□□ -1.02
DEPDC1B-203ENST00000505017 CYFIP1Q7L576 1253 aa8.68□□□□□ -1.02
DEPDC1B-203ENST00000505017 CYP8B1Q9UNU6 501 aa8.68□□□□□ -1.02
DEPDC1B-203ENST00000505017 ITIH2P19823 946 aa8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 HNRNPUQ00839 825 aaKnown RBP eCLIP8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 LRRC14Q15048 493 aa8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 AOC3Q16853 763 aa8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 NKPD1Q17RQ9 610 aa8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 SCARA3Q6AZY7 606 aa8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 SPACA3Q8IXA5 215 aa8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 PLPPR2Q96GM1 343 aa8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 SAMM50Q9Y512 469 aa8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
DEPDC1B-203ENST00000505017 GNA15P30679 374 aa8.66□□□□□ -1.02
DEPDC1B-203ENST00000505017 SLBPQ14493 270 aaKnown RBP eCLIP8.66□□□□□ -1.02
DEPDC1B-203ENST00000505017 NKG7Q16617 165 aa8.66□□□□□ -1.02
DEPDC1B-203ENST00000505017 SV2BQ7L1I2 683 aa8.66□□□□□ -1.02
DEPDC1B-203ENST00000505017 IGF2BP3O00425 579 aaKnown RBP eCLIP8.65□□□□□ -1.02
DEPDC1B-203ENST00000505017 SLITRK5O94991 958 aa8.65□□□□□ -1.02
DEPDC1B-203ENST00000505017 JUNBP17275 347 aaPredicted RBP8.65□□□□□ -1.02
DEPDC1B-203ENST00000505017 ARMCX6Q7L4S7 300 aa8.65□□□□□ -1.02
DEPDC1B-203ENST00000505017 PCDHB5Q9Y5E4 795 aa8.65□□□□□ -1.02
DEPDC1B-203ENST00000505017 PRPF40AO75400 957 aaKnown RBP8.64□□□□□ -1.03
DEPDC1B-203ENST00000505017 HRASLS5Q96KN8 279 aa8.64□□□□□ -1.03
DEPDC1B-203ENST00000505017 DUSP9Q99956 384 aaKnown RBP8.64□□□□□ -1.03
DEPDC1B-203ENST00000505017 PRDM7Q9NQW5 492 aa8.64□□□□□ -1.03
DEPDC1B-203ENST00000505017 TTF2Q9UNY4 1162 aaKnown RBP8.64□□□□□ -1.03
DEPDC1B-203ENST00000505017 AK5Q9Y6K8 562 aa8.64□□□□□ -1.03
DEPDC1B-203ENST00000505017 TMEM265A0A087WTH1 108 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 PRAMEF27A3QJZ7 478 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 ANKRD33BA6NCL7 494 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 PRR33A8MZF0 331 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 TTBK2Q6IQ55 1244 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 LRRN4CLQ8ND94 238 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 RIN3Q8TB24 985 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 ASIC4Q96FT7 647 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 RB1CC1Q8TDY2 1594 aa8.63□□□□□ -1.03
DEPDC1B-203ENST00000505017 GFRA2O00451 464 aa8.62□□□□□ -1.03
DEPDC1B-203ENST00000505017 EIF4BP23588 611 aaKnown RBP8.62□□□□□ -1.03
DEPDC1B-203ENST00000505017 MEI1Q5TIA1 1274 aa8.62□□□□□ -1.03
DEPDC1B-203ENST00000505017 ELMO3Q96BJ8 720 aa8.62□□□□□ -1.03
DEPDC1B-203ENST00000505017 FRMD6Q96NE9 622 aa8.62□□□□□ -1.03
DEPDC1B-203ENST00000505017 PICK1Q9NRD5 415 aa8.62□□□□□ -1.03
DEPDC1B-203ENST00000505017 SEPT6Q14141 434 aa8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 WIPI1Q5MNZ9 446 aaPredicted RBP8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 DNAJC14Q6Y2X3 702 aaPredicted RBP8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 POU5F2Q8N7G0 328 aa8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 ZNF507Q8TCN5 953 aa8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 WNT10AQ9GZT5 417 aa8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 RC3H2Q9HBD1 1191 aaKnown RBP8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 GTF2IRD1Q9UHL9 959 aa8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 SNX11Q9Y5W9 270 aa8.61□□□□□ -1.03
DEPDC1B-203ENST00000505017 LRIG2O94898 1065 aa8.6□□□□□ -1.03
DEPDC1B-203ENST00000505017 CAP2P40123 477 aa8.6□□□□□ -1.03
DEPDC1B-203ENST00000505017 CCDC85BQ15834 202 aaPredicted RBP8.6□□□□□ -1.03
DEPDC1B-203ENST00000505017 ARHGAP27Q6ZUM4 889 aa8.6□□□□□ -1.03
DEPDC1B-203ENST00000505017 SND1Q7KZF4 910 aaKnown RBP eCLIP8.6□□□□□ -1.03
DEPDC1B-203ENST00000505017 CDC37L1Q7L3B6 337 aa8.6□□□□□ -1.03
DEPDC1B-203ENST00000505017 NPAS4Q8IUM7 802 aa8.6□□□□□ -1.03
DEPDC1B-203ENST00000505017 PITPNM2Q9BZ72 1349 aa8.59□□□□□ -1.03
DEPDC1B-203ENST00000505017 CTSHP09668 335 aa8.59□□□□□ -1.03
DEPDC1B-203ENST00000505017 YBX3P16989 372 aaKnown RBP eCLIP8.59□□□□□ -1.03
DEPDC1B-203ENST00000505017 AGMOQ6ZNB7 445 aa8.59□□□□□ -1.03
DEPDC1B-203ENST00000505017 HDXQ7Z353 690 aa8.59□□□□□ -1.03
DEPDC1B-203ENST00000505017 ATG4DQ86TL0 474 aaPredicted RBP8.59□□□□□ -1.03
DEPDC1B-203ENST00000505017 PI4K2BQ8TCG2 481 aa8.59□□□□□ -1.03
DEPDC1B-203ENST00000505017 FOXQ1Q9C009 403 aa8.59□□□□□ -1.03
DEPDC1B-203ENST00000505017 ARID1BQ8NFD5 2236 aaPredicted RBP8.58□□□□□ -1.04
DEPDC1B-203ENST00000505017 KRTAP4-8A0A0G2JLE6 195 aa8.58□□□□□ -1.04
DEPDC1B-203ENST00000505017 TFE3P19532 575 aaPredicted RBP8.58□□□□□ -1.04
DEPDC1B-203ENST00000505017 RPS26P62854 115 aaKnown RBP8.58□□□□□ -1.04
DEPDC1B-203ENST00000505017 KCT2Q8NC54 265 aa8.58□□□□□ -1.04
DEPDC1B-203ENST00000505017 SEMA3GQ9NS98 782 aa8.58□□□□□ -1.04
DEPDC1B-203ENST00000505017 SNCAIPQ9Y6H5 919 aa8.58□□□□□ -1.04
DEPDC1B-203ENST00000505017 GRK4P32298 578 aa8.57□□□□□ -1.04
DEPDC1B-203ENST00000505017 LIG3P49916 1009 aa8.57□□□□□ -1.04
DEPDC1B-203ENST00000505017 MAP3K11Q16584 847 aa8.57□□□□□ -1.04
DEPDC1B-203ENST00000505017 ANGEL2Q5VTE6 544 aaKnown RBP8.57□□□□□ -1.04
DEPDC1B-203ENST00000505017 SLC23A3Q6PIS1 610 aa8.57□□□□□ -1.04
DEPDC1B-203ENST00000505017 PRDM5Q9NQX1 630 aaPredicted RBP8.57□□□□□ -1.04
DEPDC1B-203ENST00000505017 PARP2Q9UGN5 583 aa8.57□□□□□ -1.04
DEPDC1B-203ENST00000505017 MAPK8IP1Q9UQF2 711 aa8.57□□□□□ -1.04
DEPDC1B-203ENST00000505017 C8AP07357 584 aa8.56□□□□□ -1.04
DEPDC1B-203ENST00000505017 TAGLNQ01995 201 aaKnown RBP8.56□□□□□ -1.04
DEPDC1B-203ENST00000505017 EAPPQ56P03 285 aaPredicted RBP8.56□□□□□ -1.04
DEPDC1B-203ENST00000505017 PRAMEF13Q5VWM6 474 aa8.56□□□□□ -1.04
DEPDC1B-203ENST00000505017 FAM161BQ96MY7 647 aa8.56□□□□□ -1.04
DEPDC1B-203ENST00000505017 MIPEPQ99797 713 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms