RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 CXXC1Q9P0U4 656 aaPredicted RBP6.07□□□□□ -1.44
RFC1-208ENST00000504849 B3GALT4O96024 378 aa6.06□□□□□ -1.44
RFC1-208ENST00000504849 GRIA4P48058 902 aa6.06□□□□□ -1.44
RFC1-208ENST00000504849 CDCA8Q53HL2 280 aa6.06□□□□□ -1.44
RFC1-208ENST00000504849 MRRFQ96E11 262 aaKnown RBP6.06□□□□□ -1.44
RFC1-208ENST00000504849 SLC26A8Q96RN1 970 aa6.06□□□□□ -1.44
RFC1-208ENST00000504849 ATXN3LQ9H3M9 355 aa6.06□□□□□ -1.44
RFC1-208ENST00000504849 PIDD1Q9HB75 910 aa6.06□□□□□ -1.44
RFC1-208ENST00000504849 SUV39H1O43463 412 aa6.05□□□□□ -1.44
RFC1-208ENST00000504849 NEFMP07197 916 aa6.05□□□□□ -1.44
RFC1-208ENST00000504849 LIG1P18858 919 aa6.05□□□□□ -1.44
RFC1-208ENST00000504849 PDE3AQ14432 1141 aa6.05□□□□□ -1.44
RFC1-208ENST00000504849 TTLL4Q14679 1199 aa6.05□□□□□ -1.44
RFC1-208ENST00000504849 BORCS6Q96GS4 357 aa6.05□□□□□ -1.44
RFC1-208ENST00000504849 KIAA1522Q9P206 1035 aaPredicted RBP6.05□□□□□ -1.44
RFC1-208ENST00000504849 IGF2BP3O00425 579 aaKnown RBP eCLIP6.04□□□□□ -1.44
RFC1-208ENST00000504849 TNFRSF21O75509 655 aa6.04□□□□□ -1.44
RFC1-208ENST00000504849 CANXP27824 592 aaKnown RBP6.04□□□□□ -1.44
RFC1-208ENST00000504849 TMEM164Q5U3C3 297 aa6.04□□□□□ -1.44
RFC1-208ENST00000504849 CCNJLQ8IV13 435 aa6.04□□□□□ -1.44
RFC1-208ENST00000504849 TCF12Q99081 682 aa6.04□□□□□ -1.44
RFC1-208ENST00000504849 CCDC86Q9H6F5 360 aaKnown RBP6.04□□□□□ -1.44
RFC1-208ENST00000504849 FOXD3Q9UJU5 478 aaPredicted RBP6.04□□□□□ -1.44
RFC1-208ENST00000504849 ZMIZ1Q9ULJ6 1067 aa6.04□□□□□ -1.44
RFC1-208ENST00000504849 NOVA2Q9UNW9 492 aaKnown RBP6.04□□□□□ -1.44
RFC1-208ENST00000504849 ZNF862O60290 1169 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 CELA3BP08861 270 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 HCLS1P14317 486 aaPredicted RBP6.03□□□□□ -1.44
RFC1-208ENST00000504849 ZNF16P17020 682 aaPredicted RBP6.03□□□□□ -1.44
RFC1-208ENST00000504849 SSFA2P28290 1259 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 CLCN7P51798 805 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 ID3Q02535 119 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 DNM1Q05193 864 aaKnown RBP6.03□□□□□ -1.44
RFC1-208ENST00000504849 ZXDCQ2QGD7 858 aaPredicted RBP6.03□□□□□ -1.44
RFC1-208ENST00000504849 C8orf34Q49A92 452 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 PHLDB3Q6NSJ2 640 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 BAHD1Q8TBE0 780 aaPredicted RBP6.03□□□□□ -1.44
RFC1-208ENST00000504849 C8orf37Q96NL8 207 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 SEMA3GQ9NS98 782 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 PCOLCE2Q9UKZ9 415 aa6.03□□□□□ -1.44
RFC1-208ENST00000504849 PHACTR2O75167 634 aa6.02□□□□□ -1.45
RFC1-208ENST00000504849 TCF3P15923 654 aa6.02□□□□□ -1.45
RFC1-208ENST00000504849 VAMP1P23763 118 aa6.02□□□□□ -1.45
RFC1-208ENST00000504849 BCL2L13Q9BXK5 485 aa6.02□□□□□ -1.45
RFC1-208ENST00000504849 SOWAHDA6NJG2 315 aa6.01□□□□□ -1.45
RFC1-208ENST00000504849 CENPBP07199 599 aaPredicted RBP6.01□□□□□ -1.45
RFC1-208ENST00000504849 FAM177A1Q8N128 213 aaPredicted RBP6.01□□□□□ -1.45
RFC1-208ENST00000504849 STK32AQ8WU08 396 aa6.01□□□□□ -1.45
RFC1-208ENST00000504849 ISL2Q96A47 359 aa6.01□□□□□ -1.45
RFC1-208ENST00000504849 ATP13A1Q9HD20 1204 aa6.01□□□□□ -1.45
RFC1-208ENST00000504849 OTOL1A6NHN0 477 aaPredicted RBP6□□□□□ -1.45
RFC1-208ENST00000504849 RNGTTO60942 597 aaKnown RBP6□□□□□ -1.45
RFC1-208ENST00000504849 KIF4BQ2VIQ3 1234 aa6□□□□□ -1.45
RFC1-208ENST00000504849 ABHD4Q8TB40 342 aa6□□□□□ -1.45
RFC1-208ENST00000504849 SNX29Q8TEQ0 813 aa6□□□□□ -1.45
RFC1-208ENST00000504849 CLP1Q92989 425 aaKnown RBP6□□□□□ -1.45
RFC1-208ENST00000504849 BICRAQ9NZM4 1560 aa5.99□□□□□ -1.45
RFC1-208ENST00000504849 IGHA2P01877 340 aa5.99□□□□□ -1.45
RFC1-208ENST00000504849 EFEMP1Q12805 493 aa5.99□□□□□ -1.45
RFC1-208ENST00000504849 ZNF326Q5BKZ1 582 aaKnown RBP5.99□□□□□ -1.45
RFC1-208ENST00000504849 DRC1Q96MC2 740 aa5.99□□□□□ -1.45
RFC1-208ENST00000504849 MCOLN1Q9GZU1 580 aa5.99□□□□□ -1.45
RFC1-208ENST00000504849 ZNF576Q9H609 170 aa5.99□□□□□ -1.45
RFC1-208ENST00000504849 GTF2IRD1Q9UHL9 959 aa5.99□□□□□ -1.45
RFC1-208ENST00000504849 A0A1W2PP55 124 aa5.98□□□□□ -1.45
RFC1-208ENST00000504849 OVOL3O00110 214 aa5.98□□□□□ -1.45
RFC1-208ENST00000504849 AKAP8O43823 692 aaKnown RBP5.98□□□□□ -1.45
RFC1-208ENST00000504849 MZF1P28698 734 aaPredicted RBP5.98□□□□□ -1.45
RFC1-208ENST00000504849 ERVFC1P60507 584 aa5.98□□□□□ -1.45
RFC1-208ENST00000504849 DLG4P78352 724 aa5.98□□□□□ -1.45
RFC1-208ENST00000504849 GIPC2Q8TF65 315 aa5.98□□□□□ -1.45
RFC1-208ENST00000504849 SREK1Q8WXA9 508 aaKnown RBP5.98□□□□□ -1.45
RFC1-208ENST00000504849 MYOCOSA0A1B0GUC4 107 aa5.97□□□□□ -1.45
RFC1-208ENST00000504849 PCSK2P16519 638 aa5.97□□□□□ -1.45
RFC1-208ENST00000504849 AP3B2Q13367 1082 aa5.97□□□□□ -1.45
RFC1-208ENST00000504849 TCERG1LQ5VWI1 586 aa5.97□□□□□ -1.45
RFC1-208ENST00000504849 NPAS4Q8IUM7 802 aa5.97□□□□□ -1.45
RFC1-208ENST00000504849 CRELD1Q96HD1 420 aa5.97□□□□□ -1.45
RFC1-208ENST00000504849 BCL11AQ9H165 835 aa5.97□□□□□ -1.45
RFC1-208ENST00000504849 SEPT3Q9UH03 358 aa5.97□□□□□ -1.45
RFC1-208ENST00000504849 RSF1Q96T23 1441 aaPredicted RBP5.97□□□□□ -1.45
RFC1-208ENST00000504849 UNC13AQ9UPW8 1703 aa5.96□□□□□ -1.45
RFC1-208ENST00000504849 EOMESO95936 686 aa5.96□□□□□ -1.46
RFC1-208ENST00000504849 POLR3DP05423 398 aaPredicted RBP5.96□□□□□ -1.46
RFC1-208ENST00000504849 SLFN14P0C7P3 912 aa5.96□□□□□ -1.46
RFC1-208ENST00000504849 ZC3H6P61129 1189 aaKnown RBP5.96□□□□□ -1.46
RFC1-208ENST00000504849 NOM1Q5C9Z4 860 aaKnown RBP5.96□□□□□ -1.46
RFC1-208ENST00000504849 DDX54Q8TDD1 881 aaKnown RBP5.96□□□□□ -1.46
RFC1-208ENST00000504849 HSPA12BQ96MM6 686 aa5.96□□□□□ -1.46
RFC1-208ENST00000504849 ALPK1Q96QP1 1244 aa5.96□□□□□ -1.46
RFC1-208ENST00000504849 ZC3H12CQ9C0D7 883 aaKnown RBP5.96□□□□□ -1.46
RFC1-208ENST00000504849 LIN7BQ9HAP6 207 aa5.96□□□□□ -1.46
RFC1-208ENST00000504849 GCM1Q9NP62 436 aa5.96□□□□□ -1.46
RFC1-208ENST00000504849 INSRRP14616 1297 aa5.95□□□□□ -1.46
RFC1-208ENST00000504849 ATP2B4P23634 1241 aa5.95□□□□□ -1.46
RFC1-208ENST00000504849 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.95□□□□□ -1.46
RFC1-208ENST00000504849 PRDM10Q9NQV6 1147 aa5.95□□□□□ -1.46
RFC1-208ENST00000504849 EGFL7Q9UHF1 273 aa5.95□□□□□ -1.46
RFC1-208ENST00000504849 POLIQ9UNA4 740 aa5.95□□□□□ -1.46
RFC1-208ENST00000504849 ANKRD33BA6NCL7 494 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms