RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PAG1Q9NWQ8 432 aa17.3■□□□□ 0.36
HOXC9-202ENST00000504557 ZSWIM8A7E2V4 1837 aa17.3■□□□□ 0.36
HOXC9-202ENST00000504557 ZNF532Q9HCE3 1301 aa17.29■□□□□ 0.36
HOXC9-202ENST00000504557 MAGEB6P1A0A0J9YX57 407 aa17.29■□□□□ 0.36
HOXC9-202ENST00000504557 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
HOXC9-202ENST00000504557 PDE6AP16499 860 aa17.29■□□□□ 0.36
HOXC9-202ENST00000504557 PTPRAP18433 802 aa17.29■□□□□ 0.36
HOXC9-202ENST00000504557 SLFNL1Q499Z3 407 aa17.29■□□□□ 0.36
HOXC9-202ENST00000504557 CD99L2Q8TCZ2 262 aa17.29■□□□□ 0.36
HOXC9-202ENST00000504557 ZFYVE28Q9HCC9 887 aa17.29■□□□□ 0.36
HOXC9-202ENST00000504557 MYH8P13535 1937 aa17.28■□□□□ 0.36
HOXC9-202ENST00000504557 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
HOXC9-202ENST00000504557 CTNND1O60716 968 aaKnown RBP17.28■□□□□ 0.36
HOXC9-202ENST00000504557 ATP5JP18859 108 aa17.28■□□□□ 0.36
HOXC9-202ENST00000504557 GADL1Q6ZQY3 521 aa17.28■□□□□ 0.36
HOXC9-202ENST00000504557 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.28■□□□□ 0.36
HOXC9-202ENST00000504557 CFHR5Q9BXR6 569 aa17.28■□□□□ 0.36
HOXC9-202ENST00000504557 PI4KBQ9UBF8 816 aa17.28■□□□□ 0.36
HOXC9-202ENST00000504557 COL2A1P02458 1487 aaPredicted RBP17.28■□□□□ 0.36
HOXC9-202ENST00000504557 HLA-DOAP06340 250 aa17.27■□□□□ 0.36
HOXC9-202ENST00000504557 DHX36Q9H2U1 1008 aaKnown RBP17.27■□□□□ 0.36
HOXC9-202ENST00000504557 TRIM17Q9Y577 477 aa17.27■□□□□ 0.36
HOXC9-202ENST00000504557 PDHXO00330 501 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 TBC1D12O60347 775 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 GDF11O95390 407 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 CHGBP05060 677 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 SP3Q02447 781 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 RRP1BQ14684 758 aaKnown RBP17.26■□□□□ 0.35
HOXC9-202ENST00000504557 GPATCH3Q96I76 525 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 HAUS7Q99871 368 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 KCNH4Q9UQ05 1017 aa17.26■□□□□ 0.35
HOXC9-202ENST00000504557 NOM1Q5C9Z4 860 aaKnown RBP17.25■□□□□ 0.35
HOXC9-202ENST00000504557 ERO1AQ96HE7 468 aa17.25■□□□□ 0.35
HOXC9-202ENST00000504557 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.25■□□□□ 0.35
HOXC9-202ENST00000504557 ARMT1Q9H993 441 aa17.25■□□□□ 0.35
HOXC9-202ENST00000504557 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
HOXC9-202ENST00000504557 HERC5Q9UII4 1024 aaKnown RBP17.25■□□□□ 0.35
HOXC9-202ENST00000504557 IGSF3O75054 1194 aa17.24■□□□□ 0.35
HOXC9-202ENST00000504557 CAP2P40123 477 aa17.24■□□□□ 0.35
HOXC9-202ENST00000504557 SHROOM1Q2M3G4 852 aaPredicted RBP17.24■□□□□ 0.35
HOXC9-202ENST00000504557 LCORLQ8N3X6 602 aa17.24■□□□□ 0.35
HOXC9-202ENST00000504557 SDR42E1Q8WUS8 393 aa17.24■□□□□ 0.35
HOXC9-202ENST00000504557 RIOK1Q9BRS2 568 aaKnown RBP17.24■□□□□ 0.35
HOXC9-202ENST00000504557 CRNKL1Q9BZJ0 848 aaKnown RBP17.24■□□□□ 0.35
HOXC9-202ENST00000504557 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
HOXC9-202ENST00000504557 CPA4Q9UI42 421 aa17.24■□□□□ 0.35
HOXC9-202ENST00000504557 AFG3L2Q9Y4W6 797 aa17.24■□□□□ 0.35
HOXC9-202ENST00000504557 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 CXCL11O14625 94 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 MBD4O95243 580 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 POLR3DP05423 398 aaPredicted RBP17.23■□□□□ 0.35
HOXC9-202ENST00000504557 ADD2P35612 726 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 SPP2Q13103 211 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 OTOP1Q7RTM1 612 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 ANKRD23Q86SG2 305 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 OTUD7AQ8TE49 926 aaPredicted RBP17.23■□□□□ 0.35
HOXC9-202ENST00000504557 HPS5Q9UPZ3 1129 aa17.23■□□□□ 0.35
HOXC9-202ENST00000504557 DDX60LQ5H9U9 1706 aaKnown RBP17.23■□□□□ 0.35
HOXC9-202ENST00000504557 MGAMO43451 1857 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 A0A0G2JLL6 359 aaPredicted RBP17.22■□□□□ 0.35
HOXC9-202ENST00000504557 TLR2O60603 784 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 CYP2C8P10632 490 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 SOX10P56693 466 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 JAG1P78504 1218 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 CAP1Q01518 475 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 MOGSQ13724 837 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 PRRT2Q7Z6L0 340 aaPredicted RBP17.22■□□□□ 0.35
HOXC9-202ENST00000504557 FOXP4Q8IVH2 680 aaPredicted RBP17.22■□□□□ 0.35
HOXC9-202ENST00000504557 EFCC1Q9HA90 598 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 MCM9Q9NXL9 1143 aa17.22■□□□□ 0.35
HOXC9-202ENST00000504557 SUPT16HQ9Y5B9 1047 aaKnown RBP17.22■□□□□ 0.35
HOXC9-202ENST00000504557 LOC285556D6RIA3 1793 aa17.21■□□□□ 0.35
HOXC9-202ENST00000504557 USP17L5A8MUK1 530 aa17.21■□□□□ 0.35
HOXC9-202ENST00000504557 PRKAB2O43741 272 aa17.21■□□□□ 0.35
HOXC9-202ENST00000504557 HMGCS2P54868 508 aa17.21■□□□□ 0.35
HOXC9-202ENST00000504557 EVX2Q03828 476 aa17.21■□□□□ 0.35
HOXC9-202ENST00000504557 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.35
HOXC9-202ENST00000504557 GPAT2Q6NUI2 795 aa17.21■□□□□ 0.35
HOXC9-202ENST00000504557 FBXO46Q6PJ61 603 aaPredicted RBP17.21■□□□□ 0.35
HOXC9-202ENST00000504557 FASTKD5Q7L8L6 764 aaKnown RBP17.21■□□□□ 0.35
HOXC9-202ENST00000504557 EXOC6Q8TAG9 804 aa17.21■□□□□ 0.35
HOXC9-202ENST00000504557 ARHGAP39Q9C0H5 1083 aa17.21■□□□□ 0.35
HOXC9-202ENST00000504557 CYP2D6P10635 497 aa17.2■□□□□ 0.34
HOXC9-202ENST00000504557 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
HOXC9-202ENST00000504557 KIF22Q14807 665 aa17.2■□□□□ 0.34
HOXC9-202ENST00000504557 ZSCAN25Q6NSZ9 544 aa17.2■□□□□ 0.34
HOXC9-202ENST00000504557 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
HOXC9-202ENST00000504557 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
HOXC9-202ENST00000504557 ZNF280CQ8ND82 737 aa17.2■□□□□ 0.34
HOXC9-202ENST00000504557 PARK7Q99497 189 aaKnown RBP17.2■□□□□ 0.34
HOXC9-202ENST00000504557 AS3MTQ9HBK9 375 aa17.2■□□□□ 0.34
HOXC9-202ENST00000504557 ZCCHC17Q9NP64 241 aaKnown RBP17.2■□□□□ 0.34
HOXC9-202ENST00000504557 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
HOXC9-202ENST00000504557 PLCD1P51178 756 aa17.19■□□□□ 0.34
HOXC9-202ENST00000504557 MTMR2Q13614 643 aa17.19■□□□□ 0.34
HOXC9-202ENST00000504557 TREML2Q5T2D2 321 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms