RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 MCMDC2Q4G0Z9 681 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 ANKLE2Q86XL3 938 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 OTUD6BQ8N6M0 293 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 MMS19Q96T76 1030 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 E7EWF7 191 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 WDR93Q6P2C0 686 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 PPFIBP1Q86W92 1011 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 AGXT2Q9BYV1 514 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 GRIN2DO15399 1336 aa16.07■□□□□ 0.16
COL6A4P2-202ENST00000504443 CASP14P31944 242 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 STX17P56962 302 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 WHAMMP3Q1A5X7 153 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 FAXDC2Q96IV6 333 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 VIPAS39Q9H9C1 493 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 MCM8Q9UJA3 840 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 EIF3HO15372 352 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 USP14P54578 494 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 PDCLQ13371 301 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 NEDD9Q14511 834 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 NR1I3Q14994 352 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 SBNO1A3KN83 1393 aa16.06■□□□□ 0.16
COL6A4P2-202ENST00000504443 NDUFAB1O14561 156 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 CDC25AP30304 524 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 PDE6BP35913 854 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 BIRC2Q13490 618 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 SLC9C2Q5TAH2 1124 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 CEP57Q86XR8 500 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 SLF1Q9BQI6 1058 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 SELENOOQ9BVL4 669 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 VEZTQ9HBM0 779 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 GUCA1BQ9UMX6 200 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 NCAPD2Q15021 1401 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 USP6P35125 1406 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 GRM8O00222 908 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 ZEB2O60315 1214 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 SKAP2O75563 359 aaPredicted RBP16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 SSBP05455 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 ZNF18P17022 549 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 NF2P35240 595 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 ATP1A2P50993 1020 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 PPFIA1Q13136 1202 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 EPHA10Q5JZY3 1008 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 RNF187Q5TA31 235 aaPredicted RBP16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 KLHL10Q6JEL2 608 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 MAN1B1Q9UKM7 699 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 ODF2LQ9ULJ1 636 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 HPSEQ9Y251 543 aa16.05■□□□□ 0.16
COL6A4P2-202ENST00000504443 GOLGA6BA6NDN3 693 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 SLC39A14Q15043 492 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 RASGRP2Q7LDG7 609 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 RRP36Q96EU6 259 aaKnown RBP16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 KDM4FA0A1W2PPD8 638 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 PPP1R12AO14974 1030 aaPredicted RBP16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 KIAA0754O94854 1291 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 HMGB1P09429 215 aaKnown RBP16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 FXR1P51114 621 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 AIMP1Q12904 312 aaKnown RBP16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 CCDC102BQ68D86 513 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 DBNDD2Q9BQY9 259 aa16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
COL6A4P2-202ENST00000504443 RNF225M0QZC1 329 aaPredicted RBP16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 ATP5JP18859 108 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 ARHGAP25P42331 645 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 AMPD2Q01433 879 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 TFCP2Q12800 502 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 BCCIPQ9P287 314 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 FMN2Q9NZ56 1722 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 C21orf2O43822 256 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 ERVK-24P63145 666 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 KCTD16Q68DU8 428 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 ANKRD18AQ8IVF6 992 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 SH2D3CQ8N5H7 860 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 SEC31BQ9NQW1 1179 aa16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.03■□□□□ 0.16
COL6A4P2-202ENST00000504443 CHUKO15111 745 aa16.02■□□□□ 0.16
COL6A4P2-202ENST00000504443 HAND2P61296 217 aa16.02■□□□□ 0.16
COL6A4P2-202ENST00000504443 KSR2Q6VAB6 950 aa16.02■□□□□ 0.16
COL6A4P2-202ENST00000504443 FAM43BQ6ZT52 329 aaPredicted RBP16.02■□□□□ 0.16
COL6A4P2-202ENST00000504443 ARL8AQ96BM9 186 aa16.02■□□□□ 0.16
COL6A4P2-202ENST00000504443 NALCNQ8IZF0 1738 aa16.02■□□□□ 0.15
COL6A4P2-202ENST00000504443 ZNF185O15231 689 aa16.02■□□□□ 0.15
COL6A4P2-202ENST00000504443 PDHBP11177 359 aa16.02■□□□□ 0.15
COL6A4P2-202ENST00000504443 KLC4Q9NSK0 619 aa16.02■□□□□ 0.15
COL6A4P2-202ENST00000504443 ATP1A1P05023 1023 aaKnown RBP16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 GRIN1Q05586 938 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 DDR1Q08345 913 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 SND1Q7KZF4 910 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 BRAPQ7Z569 592 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 XAGE2Q96GT9 111 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 BABAM1Q9NWV8 329 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 TBX22Q9Y458 520 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms