RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 RTKN2Q8IZC4 609 aa11.99□□□□□ -0.49
CDK7-203ENST00000504147 ZSCAN10Q96SZ4 725 aaPredicted RBP11.99□□□□□ -0.49
CDK7-203ENST00000504147 KCNQ5Q9NR82 932 aa11.99□□□□□ -0.49
CDK7-203ENST00000504147 TTF2Q9UNY4 1162 aaKnown RBP11.99□□□□□ -0.49
CDK7-203ENST00000504147 DAGLAQ9Y4D2 1042 aa11.99□□□□□ -0.49
CDK7-203ENST00000504147 COL11A2P13942 1736 aaPredicted RBP11.99□□□□□ -0.49
CDK7-203ENST00000504147 TIAM2Q8IVF5 1701 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 GOLGA8AA7E2F4 631 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 POLR3DP05423 398 aaPredicted RBP11.98□□□□□ -0.49
CDK7-203ENST00000504147 FDPSP14324 419 aaKnown RBP11.98□□□□□ -0.49
CDK7-203ENST00000504147 POLD1P28340 1107 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 ADD1P35611 737 aaKnown RBP11.98□□□□□ -0.49
CDK7-203ENST00000504147 FKBP1AP62942 108 aaKnown RBP11.98□□□□□ -0.49
CDK7-203ENST00000504147 SEC23AQ15436 765 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 AOC3Q16853 763 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 CCDC93Q567U6 631 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 STRIP1Q5VSL9 837 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
CDK7-203ENST00000504147 HHIPL2Q6UWX4 724 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 MRIQ9BWK5 157 aa11.98□□□□□ -0.49
CDK7-203ENST00000504147 ORC3Q9UBD5 711 aaPredicted RBP11.98□□□□□ -0.49
CDK7-203ENST00000504147 SAP30BPQ9UHR5 308 aaKnown RBP11.98□□□□□ -0.49
CDK7-203ENST00000504147 DDX49Q9Y6V7 483 aaKnown RBP11.98□□□□□ -0.49
CDK7-203ENST00000504147 TNKSO95271 1327 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 USP17L3A6NCW0 530 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 USP17L4A6NCW7 530 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 CDKL5O76039 1030 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 RXRAP19793 462 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 CDC27P30260 824 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 NT5C2P49902 561 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 TGFB2P61812 414 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 KLHL40Q2TBA0 621 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 DACT2Q5SW24 774 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 USP17L1Q7RTZ2 530 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 USP48Q86UV5 1035 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 FERMT3Q86UX7 667 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 MICU3Q86XE3 530 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 IQCA1Q86XH1 822 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 DYNLL2Q96FJ2 89 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 MYL10Q9BUA6 226 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 MTFR1LQ9H019 292 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
CDK7-203ENST00000504147 FAM217BQ9NTX9 383 aaPredicted RBP11.97□□□□□ -0.49
CDK7-203ENST00000504147 USP40Q9NVE5 1235 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 CNPY2Q9Y2B0 182 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 MAST2Q6P0Q8 1798 aa11.97□□□□□ -0.49
CDK7-203ENST00000504147 PPIP5K2O43314 1243 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
CDK7-203ENST00000504147 SCNN1DP51172 638 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 PLCD1P51178 756 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 FOSBP53539 338 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 RCAN1P53805 252 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 DNM1Q05193 864 aaKnown RBP11.96□□□□□ -0.49
CDK7-203ENST00000504147 RESTQ13127 1097 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 SLC4A8Q2Y0W8 1093 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 FAM47AQ5JRC9 791 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 CCDC144CPQ8IYA2 1237 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 ZNF654Q8IZM8 581 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 ENAHQ8N8S7 591 aaPredicted RBP11.96□□□□□ -0.49
CDK7-203ENST00000504147 TMEM87AQ8NBN3 555 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 TEKT1Q969V4 418 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 PSMD1Q99460 953 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 ZSCAN16Q9H4T2 348 aaPredicted RBP11.96□□□□□ -0.49
CDK7-203ENST00000504147 MKNK2Q9HBH9 465 aa11.96□□□□□ -0.49
CDK7-203ENST00000504147 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 LAMA4Q16363 1823 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 FLT1P17948 1338 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 CCDC196A0A1B0GTZ2 297 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 TSPY2A6NKD2 308 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 CRKP46108 304 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 HDLBPQ00341 1268 aaKnown RBP11.95□□□□□ -0.5
CDK7-203ENST00000504147 TFAP4Q01664 338 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
CDK7-203ENST00000504147 NTRK3Q16288 839 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 RTN1Q16799 776 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 CSPP1Q1MSJ5 1256 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 IFIT1BQ5T764 474 aaKnown RBP11.95□□□□□ -0.5
CDK7-203ENST00000504147 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
CDK7-203ENST00000504147 CATIPQ7Z7H3 387 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 FANCBQ8NB91 859 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 RGS22Q8NE09 1264 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 C8orf76Q96K31 380 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 ZNF287Q9HBT7 754 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 GDPD2Q9HCC8 539 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
CDK7-203ENST00000504147 NID2Q14112 1375 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 ROBO3Q96MS0 1386 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 MBD3O95983 291 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 IFNAR1P17181 557 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 DEKP35659 375 aaKnown RBP11.94□□□□□ -0.5
CDK7-203ENST00000504147 IARSP41252 1262 aaKnown RBP11.94□□□□□ -0.5
CDK7-203ENST00000504147 KRT85P78386 507 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 SSRP1Q08945 709 aaKnown RBP11.94□□□□□ -0.5
CDK7-203ENST00000504147 PPP2R5BQ15173 497 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 CCDC178Q5BJE1 867 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 SOGA3Q5TF21 947 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 CDC42EP5Q6NZY7 148 aa11.94□□□□□ -0.5
CDK7-203ENST00000504147 ILDR1Q86SU0 546 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms