RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 PSME4Q14997 1843 aa11□□□□□ -0.65
ARHGEF28-206ENST00000504003 DICER1Q9UPY3 1922 aaKnown RBP11□□□□□ -0.65
ARHGEF28-206ENST00000504003 A0A0D9SFI3 127 aa11□□□□□ -0.65
ARHGEF28-206ENST00000504003 RAD17O75943 681 aa11□□□□□ -0.65
ARHGEF28-206ENST00000504003 APPP05067 770 aa11□□□□□ -0.65
ARHGEF28-206ENST00000504003 VIL1P09327 827 aaKnown RBP11□□□□□ -0.65
ARHGEF28-206ENST00000504003 RBM5P52756 815 aaKnown RBP eCLIP11□□□□□ -0.65
ARHGEF28-206ENST00000504003 RASSF7Q02833 373 aa11□□□□□ -0.65
ARHGEF28-206ENST00000504003 PADI6Q6TGC4 694 aa11□□□□□ -0.65
ARHGEF28-206ENST00000504003 HHIPL2Q6UWX4 724 aa11□□□□□ -0.65
ARHGEF28-206ENST00000504003 IL27Q8NEV9 243 aa11□□□□□ -0.65
ARHGEF28-206ENST00000504003 CRNKL1Q9BZJ0 848 aaKnown RBP11□□□□□ -0.65
ARHGEF28-206ENST00000504003 ZC3H4Q9UPT8 1303 aaKnown RBP11□□□□□ -0.65
ARHGEF28-206ENST00000504003 MYO5AQ9Y4I1 1855 aaKnown RBP11□□□□□ -0.65
ARHGEF28-206ENST00000504003 TCRBV5S4A2TA0A5A2 114 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 C3orf80F5H4A9 247 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 F8W031 263 aaPredicted RBP10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 FZD9O00144 591 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 PSMD14O00487 310 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 GPAA1O43292 621 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 MYO1BO43795 1136 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 MBD4O95243 580 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 ZKSCAN1P17029 563 aaPredicted RBP10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 DSCC1Q9BVC3 393 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 C22orf23Q9BZE7 217 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 RNF181Q9P0P0 153 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 MROH7-TTC4A0A0A0MT08 1334 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 MYH2Q9UKX2 1941 aa10.99□□□□□ -0.65
ARHGEF28-206ENST00000504003 YDJCA8MPS7 323 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 USP17L8P0C7I0 530 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 YBX3P16989 372 aaKnown RBP eCLIP10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 CXCL9Q07325 125 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 KIAA0825Q8IV33 1275 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 DPF2Q92785 391 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 OSBP2Q969R2 916 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 PUS7LQ9H0K6 701 aaKnown RBP10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 AATFQ9NY61 560 aaKnown RBP eCLIP10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 TMOD2Q9NZR1 351 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 GJA3Q9Y6H8 435 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 SLC4A4Q9Y6R1 1079 aa10.98□□□□□ -0.65
ARHGEF28-206ENST00000504003 GPR75-ASB3A0A0A6YYF3 556 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 PATL2C9JE40 543 aaKnown RBP10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 H7C1D1 291 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 M0R2C6 588 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 SLC3A2P08195 630 aaKnown RBP10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 LMOD1P29536 600 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 USP5P45974 858 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 IMMTQ16891 758 aaKnown RBP10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 GIMAP6Q6P9H5 292 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 GPC2Q8N158 579 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 TTC13Q8NBP0 860 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 MAP4K1Q92918 833 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 STRBPQ96SI9 672 aaKnown RBP10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 SEC62Q99442 399 aaKnown RBP10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 USP26Q9BXU7 913 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 NAPBQ9H115 298 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 ATP8A2Q9NTI2 1148 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 SBF1O95248 1867 aa10.97□□□□□ -0.65
ARHGEF28-206ENST00000504003 SCN9AQ15858 1988 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 GAKO14976 1311 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 BTDP43251 543 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 CRKP46108 304 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 TDO2P48775 406 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 APLP1P51693 650 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 ANAPC15P60006 121 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 KRT32Q14532 448 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 DLGAP5Q15398 846 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 DIXDC1Q155Q3 683 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 C9orf131Q5VYM1 1079 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 CERS5Q8N5B7 392 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 ZDHHC15Q96MV8 337 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 PRR14Q9BWN1 585 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 LSG1Q9H089 658 aaKnown RBP10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 ARMT1Q9H993 441 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 KCNQ5Q9NR82 932 aa10.96□□□□□ -0.65
ARHGEF28-206ENST00000504003 ZMYM6O95789 1325 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 ZNF213O14771 459 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 PSMA5P28066 241 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 GGCXP38435 758 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 SCNN1DP51172 638 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 SWT1Q5T5J6 900 aaKnown RBP10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 PPP1R18Q6NYC8 613 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 ZNF589Q86UQ0 364 aaPredicted RBP10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 TEX11Q8IYF3 940 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 RIOK1Q9BRS2 568 aaKnown RBP10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 PRKD2Q9BZL6 878 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 ZNF287Q9HBT7 754 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 DAGLAQ9Y4D2 1042 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 RBM8AQ9Y5S9 174 aaKnown RBP10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 TIAM2Q8IVF5 1701 aa10.95□□□□□ -0.66
ARHGEF28-206ENST00000504003 HSPA4P34932 840 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 ANP32AP39687 249 aaKnown RBP10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 TNNI2P48788 182 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 RBM25P49756 843 aaKnown RBP10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 TRDNQ13061 729 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms