RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 EVX2Q03828 476 aa26.08■■□□□ 1.77
PCDH1-204ENST00000503492 MAST2Q6P0Q8 1798 aa26.08■■□□□ 1.77
PCDH1-204ENST00000503492 PRDM1O75626 825 aa26.07■■□□□ 1.76
PCDH1-204ENST00000503492 GYS1P13807 737 aa26.07■■□□□ 1.76
PCDH1-204ENST00000503492 GNL2Q13823 731 aaKnown RBP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 SLC39A14Q15043 492 aa26.07■■□□□ 1.76
PCDH1-204ENST00000503492 CMTR1Q8N1G2 835 aaKnown RBP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 WASF1Q92558 559 aa26.07■■□□□ 1.76
PCDH1-204ENST00000503492 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 CRNKL1Q9BZJ0 848 aaKnown RBP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 DCP1AQ9NPI6 582 aaPredicted RBP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 LEMD3Q9Y2U8 911 aa26.07■■□□□ 1.76
PCDH1-204ENST00000503492 CCDC88AQ3V6T2 1871 aa26.07■■□□□ 1.76
PCDH1-204ENST00000503492 AXDND1Q5T1B0 1012 aaPredicted RBP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 CRACR2BQ8N4Y2 399 aaPredicted RBP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 ENAHQ8N8S7 591 aaPredicted RBP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 ZSCAN10Q96SZ4 725 aaPredicted RBP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.07■■□□□ 1.76
PCDH1-204ENST00000503492 CCDC196A0A1B0GTZ2 297 aa26.06■■□□□ 1.76
PCDH1-204ENST00000503492 ZNF165P49910 485 aa26.06■■□□□ 1.76
PCDH1-204ENST00000503492 CCDC82Q8N4S0 544 aa26.06■■□□□ 1.76
PCDH1-204ENST00000503492 QTRT2Q9H974 415 aaKnown RBP26.06■■□□□ 1.76
PCDH1-204ENST00000503492 TRIM22Q8IYM9 498 aa26.06■■□□□ 1.76
PCDH1-204ENST00000503492 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.05■■□□□ 1.76
PCDH1-204ENST00000503492 PCP11498 1178 aaKnown RBP26.05■■□□□ 1.76
PCDH1-204ENST00000503492 WDHD1O75717 1129 aaPredicted RBP26.05■■□□□ 1.76
PCDH1-204ENST00000503492 TDRD7Q8NHU6 1098 aaKnown RBP26.05■■□□□ 1.76
PCDH1-204ENST00000503492 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.05■■□□□ 1.76
PCDH1-204ENST00000503492 XDHP47989 1333 aa26.05■■□□□ 1.76
PCDH1-204ENST00000503492 PTPAQ15257 358 aa26.04■■□□□ 1.76
PCDH1-204ENST00000503492 MAP3K14Q99558 947 aa26.04■■□□□ 1.76
PCDH1-204ENST00000503492 ATP8A2Q9NTI2 1148 aa26.04■■□□□ 1.76
PCDH1-204ENST00000503492 MARCKSP29966 332 aaPredicted RBP26.04■■□□□ 1.76
PCDH1-204ENST00000503492 SPTY2D1Q68D10 685 aaPredicted RBP26.04■■□□□ 1.76
PCDH1-204ENST00000503492 DEXIO95424 95 aa26.03■■□□□ 1.76
PCDH1-204ENST00000503492 CAVIN2O95810 425 aa26.03■■□□□ 1.76
PCDH1-204ENST00000503492 MMP1P03956 469 aa26.03■■□□□ 1.76
PCDH1-204ENST00000503492 STX1AQ16623 288 aa26.03■■□□□ 1.76
PCDH1-204ENST00000503492 TMED8Q6PL24 325 aaPredicted RBP26.03■■□□□ 1.76
PCDH1-204ENST00000503492 C11orf57Q6ZUT1 292 aaPredicted RBP26.03■■□□□ 1.76
PCDH1-204ENST00000503492 DZIP1Q86YF9 867 aaKnown RBP26.03■■□□□ 1.76
PCDH1-204ENST00000503492 RPGRQ92834 1020 aaKnown RBP26.03■■□□□ 1.76
PCDH1-204ENST00000503492 GPR101Q96P66 508 aaPredicted RBP26.03■■□□□ 1.76
PCDH1-204ENST00000503492 SERPINB2P05120 415 aa26.03■■□□□ 1.76
PCDH1-204ENST00000503492 CRY2Q49AN0 593 aa26.03■■□□□ 1.76
PCDH1-204ENST00000503492 KCNJ14Q9UNX9 436 aa26.03■■□□□ 1.76
PCDH1-204ENST00000503492 LAMB1P07942 1786 aa26.02■■□□□ 1.76
PCDH1-204ENST00000503492 CYP2D6P10635 497 aa26.02■■□□□ 1.76
PCDH1-204ENST00000503492 SLC27A3Q5K4L6 730 aa26.02■■□□□ 1.76
PCDH1-204ENST00000503492 IFIT1BQ5T764 474 aaKnown RBP26.02■■□□□ 1.76
PCDH1-204ENST00000503492 IQCA1Q86XH1 822 aa26.02■■□□□ 1.76
PCDH1-204ENST00000503492 ERCC4Q92889 916 aaPredicted RBP26.02■■□□□ 1.76
PCDH1-204ENST00000503492 ZNF830Q96NB3 372 aaPredicted RBP26.02■■□□□ 1.76
PCDH1-204ENST00000503492 BTBD18B2RXH4 712 aa26.02■■□□□ 1.76
PCDH1-204ENST00000503492 CMA1P23946 247 aa26.02■■□□□ 1.76
PCDH1-204ENST00000503492 WDR66Q8TBY9 1149 aa26.02■■□□□ 1.76
PCDH1-204ENST00000503492 MROH7-TTC4A0A0A0MT08 1334 aa26.02■■□□□ 1.76
PCDH1-204ENST00000503492 A0A087WWV3 80 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 ORC4O43929 436 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 PPP6R2O75170 966 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 GPSM2P81274 684 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 IQCB1Q15051 598 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 PPP2R5BQ15173 497 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 NOSTRINQ8IVI9 506 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 SDF4Q9BRK5 362 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 KIAA1551Q9HCM1 1747 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 DLEC1Q9Y238 1755 aa26.01■■□□□ 1.75
PCDH1-204ENST00000503492 SBK1Q52WX2 424 aa26■■□□□ 1.75
PCDH1-204ENST00000503492 DIS3L2Q8IYB7 885 aaKnown RBP26■■□□□ 1.75
PCDH1-204ENST00000503492 ARPP21Q9UBL0 812 aaPredicted RBP26■■□□□ 1.75
PCDH1-204ENST00000503492 LDHBP07195 334 aaKnown RBP26■■□□□ 1.75
PCDH1-204ENST00000503492 PFKFB1P16118 471 aa26■■□□□ 1.75
PCDH1-204ENST00000503492 ST5P78524 1137 aa26■■□□□ 1.75
PCDH1-204ENST00000503492 GRIK5Q16478 980 aa26■■□□□ 1.75
PCDH1-204ENST00000503492 C15orf52Q6ZUT6 534 aaKnown RBP26■■□□□ 1.75
PCDH1-204ENST00000503492 ZNF202O95125 648 aa25.99■■□□□ 1.75
PCDH1-204ENST00000503492 ZNF804AQ7Z570 1209 aa25.99■■□□□ 1.75
PCDH1-204ENST00000503492 CATIPQ7Z7H3 387 aa25.99■■□□□ 1.75
PCDH1-204ENST00000503492 TTC12Q9H892 705 aaPredicted RBP25.99■■□□□ 1.75
PCDH1-204ENST00000503492 TRIM37O94972 964 aa25.99■■□□□ 1.75
PCDH1-204ENST00000503492 SAFBQ15424 915 aaKnown RBP eCLIP25.99■■□□□ 1.75
PCDH1-204ENST00000503492 RNF26Q9BY78 433 aaPredicted RBP25.99■■□□□ 1.75
PCDH1-204ENST00000503492 FUT2Q10981 343 aa25.98■■□□□ 1.75
PCDH1-204ENST00000503492 TROAPQ12815 778 aa25.98■■□□□ 1.75
PCDH1-204ENST00000503492 BRWD3Q6RI45 1802 aa25.98■■□□□ 1.75
PCDH1-204ENST00000503492 MYH6P13533 1939 aa25.98■■□□□ 1.75
PCDH1-204ENST00000503492 OFD1O75665 1012 aa25.98■■□□□ 1.75
PCDH1-204ENST00000503492 JMYQ8N9B5 988 aa25.98■■□□□ 1.75
PCDH1-204ENST00000503492 ANO10Q9NW15 660 aa25.98■■□□□ 1.75
PCDH1-204ENST00000503492 NMT2O60551 498 aa25.97■■□□□ 1.75
PCDH1-204ENST00000503492 FAM47AQ5JRC9 791 aa25.97■■□□□ 1.75
PCDH1-204ENST00000503492 SHC4Q6S5L8 630 aa25.97■■□□□ 1.75
PCDH1-204ENST00000503492 KRT27Q7Z3Y8 459 aa25.97■■□□□ 1.75
PCDH1-204ENST00000503492 SPC24Q8NBT2 197 aa25.97■■□□□ 1.75
PCDH1-204ENST00000503492 FOXP1Q9H334 677 aaPredicted RBP25.97■■□□□ 1.75
PCDH1-204ENST00000503492 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.97■■□□□ 1.75
PCDH1-204ENST00000503492 USP17L8P0C7I0 530 aa25.97■■□□□ 1.75
PCDH1-204ENST00000503492 TOB1P50616 345 aaPredicted RBP25.97■■□□□ 1.75
PCDH1-204ENST00000503492 DDR1Q08345 913 aa25.97■■□□□ 1.75
PCDH1-204ENST00000503492 SHISA4Q96DD7 197 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms