RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ZBTB37Q5TC79 503 aa9.54□□□□□ -0.88
NIPBL-203ENST00000503274 FAM196AQ6ZSG2 479 aa9.54□□□□□ -0.88
NIPBL-203ENST00000503274 ISL2Q96A47 359 aa9.54□□□□□ -0.88
NIPBL-203ENST00000503274 SSU72Q9NP77 194 aaKnown RBP9.54□□□□□ -0.88
NIPBL-203ENST00000503274 RACK1P63244 317 aaKnown RBP9.53□□□□□ -0.88
NIPBL-203ENST00000503274 ZNF654Q8IZM8 581 aa9.53□□□□□ -0.88
NIPBL-203ENST00000503274 SPON2Q9BUD6 331 aa9.53□□□□□ -0.88
NIPBL-203ENST00000503274 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
NIPBL-203ENST00000503274 TACC3Q9Y6A5 838 aa9.53□□□□□ -0.88
NIPBL-203ENST00000503274 ROBO2Q9HCK4 1378 aa9.52□□□□□ -0.88
NIPBL-203ENST00000503274 NTF4P34130 210 aa9.52□□□□□ -0.89
NIPBL-203ENST00000503274 MPP2Q14168 576 aa9.52□□□□□ -0.89
NIPBL-203ENST00000503274 RNF43Q68DV7 783 aa9.52□□□□□ -0.89
NIPBL-203ENST00000503274 KIAA0825Q8IV33 1275 aa9.52□□□□□ -0.89
NIPBL-203ENST00000503274 WNT10AQ9GZT5 417 aa9.52□□□□□ -0.89
NIPBL-203ENST00000503274 LGR6Q9HBX8 967 aa9.52□□□□□ -0.89
NIPBL-203ENST00000503274 GSC2O15499 205 aa9.51□□□□□ -0.89
NIPBL-203ENST00000503274 FSTP19883 344 aa9.51□□□□□ -0.89
NIPBL-203ENST00000503274 CDC37L1Q7L3B6 337 aa9.51□□□□□ -0.89
NIPBL-203ENST00000503274 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
NIPBL-203ENST00000503274 FBXO27Q8NI29 283 aa9.51□□□□□ -0.89
NIPBL-203ENST00000503274 ZNF507Q8TCN5 953 aa9.51□□□□□ -0.89
NIPBL-203ENST00000503274 TLR3O15455 904 aaKnown RBP9.5□□□□□ -0.89
NIPBL-203ENST00000503274 DYNC1LI2O43237 492 aaPredicted RBP9.5□□□□□ -0.89
NIPBL-203ENST00000503274 ETF1P62495 437 aaKnown RBP9.5□□□□□ -0.89
NIPBL-203ENST00000503274 NFIAQ12857 509 aa9.5□□□□□ -0.89
NIPBL-203ENST00000503274 SEZ6L2Q6UXD5 910 aa9.5□□□□□ -0.89
NIPBL-203ENST00000503274 SLC51AQ86UW1 340 aa9.5□□□□□ -0.89
NIPBL-203ENST00000503274 KCT2Q8NC54 265 aa9.5□□□□□ -0.89
NIPBL-203ENST00000503274 NT5C1AQ9BXI3 368 aa9.5□□□□□ -0.89
NIPBL-203ENST00000503274 LRRC3Q9BY71 257 aa9.5□□□□□ -0.89
NIPBL-203ENST00000503274 PRKAG2Q9UGJ0 569 aa9.5□□□□□ -0.89
NIPBL-203ENST00000503274 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.5□□□□□ -0.89
NIPBL-203ENST00000503274 IGLV1-40P01703 118 aa9.49□□□□□ -0.89
NIPBL-203ENST00000503274 GRK4P32298 578 aa9.49□□□□□ -0.89
NIPBL-203ENST00000503274 CWF19L2Q2TBE0 894 aaKnown RBP9.49□□□□□ -0.89
NIPBL-203ENST00000503274 REC114Q7Z4M0 266 aa9.49□□□□□ -0.89
NIPBL-203ENST00000503274 UBP1Q9NZI7 540 aa9.49□□□□□ -0.89
NIPBL-203ENST00000503274 PDE4BQ07343 736 aa9.48□□□□□ -0.89
NIPBL-203ENST00000503274 APOBRQ0VD83 1088 aa9.48□□□□□ -0.89
NIPBL-203ENST00000503274 PRSS36Q5K4E3 855 aa9.48□□□□□ -0.89
NIPBL-203ENST00000503274 EAF1Q96JC9 268 aaPredicted RBP9.48□□□□□ -0.89
NIPBL-203ENST00000503274 DBNDD2Q9BQY9 259 aa9.48□□□□□ -0.89
NIPBL-203ENST00000503274 TGIF2Q9GZN2 237 aa9.48□□□□□ -0.89
NIPBL-203ENST00000503274 C1GALT1Q9NS00 363 aa9.48□□□□□ -0.89
NIPBL-203ENST00000503274 IGSF5Q9NSI5 407 aa9.48□□□□□ -0.89
NIPBL-203ENST00000503274 PGRP06401 933 aa9.47□□□□□ -0.89
NIPBL-203ENST00000503274 ERCC5P28715 1186 aaPredicted RBP9.47□□□□□ -0.89
NIPBL-203ENST00000503274 CRKP46108 304 aa9.47□□□□□ -0.89
NIPBL-203ENST00000503274 RAD51AP2Q09MP3 1159 aa9.47□□□□□ -0.89
NIPBL-203ENST00000503274 UBE3DQ7Z6J8 389 aa9.47□□□□□ -0.89
NIPBL-203ENST00000503274 HID1Q8IV36 788 aa9.47□□□□□ -0.89
NIPBL-203ENST00000503274 MFSD14AQ96MC6 490 aa9.47□□□□□ -0.89
NIPBL-203ENST00000503274 TBC1D32Q96NH3 1257 aa9.47□□□□□ -0.89
NIPBL-203ENST00000503274 SEZ6Q53EL9 994 aa9.46□□□□□ -0.9
NIPBL-203ENST00000503274 ZAR1Q86SH2 424 aa9.46□□□□□ -0.9
NIPBL-203ENST00000503274 FBXL6Q8N531 539 aa9.46□□□□□ -0.9
NIPBL-203ENST00000503274 NKD1Q969G9 470 aa9.46□□□□□ -0.9
NIPBL-203ENST00000503274 FBRSQ9HAH7 460 aa9.46□□□□□ -0.9
NIPBL-203ENST00000503274 POLR3KQ9Y2Y1 108 aaPredicted RBP9.46□□□□□ -0.9
NIPBL-203ENST00000503274 CORINQ9Y5Q5 1042 aa9.46□□□□□ -0.9
NIPBL-203ENST00000503274 GRIN3BO60391 1043 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 PLCG1P19174 1290 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 ADMP35318 185 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 GIMAP7Q8NHV1 300 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 GATA6Q92908 595 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 PSMG3-AS1Q96PY0 264 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 CCSER2Q9H7U1 834 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 BRMS1Q9HCU9 246 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 ADAM30Q9UKF2 790 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 PRR36Q9H6K5 1346 aa9.45□□□□□ -0.9
NIPBL-203ENST00000503274 F13BP05160 661 aa9.44□□□□□ -0.9
NIPBL-203ENST00000503274 CAP2P40123 477 aa9.44□□□□□ -0.9
NIPBL-203ENST00000503274 PAK2Q13177 524 aa9.44□□□□□ -0.9
NIPBL-203ENST00000503274 CDK5R2Q13319 367 aa9.44□□□□□ -0.9
NIPBL-203ENST00000503274 NKG7Q16617 165 aa9.44□□□□□ -0.9
NIPBL-203ENST00000503274 SLITRK4Q8IW52 837 aa9.44□□□□□ -0.9
NIPBL-203ENST00000503274 SHKBP1Q8TBC3 707 aa9.44□□□□□ -0.9
NIPBL-203ENST00000503274 ACBD3Q9H3P7 528 aa9.44□□□□□ -0.9
NIPBL-203ENST00000503274 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
NIPBL-203ENST00000503274 MCM4P33991 863 aa9.43□□□□□ -0.9
NIPBL-203ENST00000503274 SLBPQ14493 270 aaKnown RBP eCLIP9.43□□□□□ -0.9
NIPBL-203ENST00000503274 OGFOD3Q6PK18 319 aa9.43□□□□□ -0.9
NIPBL-203ENST00000503274 SHISA5Q8N114 240 aa9.43□□□□□ -0.9
NIPBL-203ENST00000503274 ATG3Q9NT62 314 aa9.43□□□□□ -0.9
NIPBL-203ENST00000503274 LRIG2O94898 1065 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 HTR3BO95264 441 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 TMEM201Q5SNT2 666 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 ZMYM1Q5SVZ6 1142 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 SLC6A19Q695T7 634 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 ARMCX6Q7L4S7 300 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 MCATQ8IVS2 390 aaKnown RBP9.42□□□□□ -0.9
NIPBL-203ENST00000503274 MRPL41Q8IXM3 137 aaKnown RBP9.42□□□□□ -0.9
NIPBL-203ENST00000503274 REXO1Q8N1G1 1221 aaKnown RBP9.42□□□□□ -0.9
NIPBL-203ENST00000503274 ACSF2Q96CM8 615 aaPredicted RBP9.42□□□□□ -0.9
NIPBL-203ENST00000503274 TMEM87BQ96K49 555 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 KRTAP4-8Q9BYQ9 185 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 FOXQ1Q9C009 403 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 REV1Q9UBZ9 1251 aa9.42□□□□□ -0.9
NIPBL-203ENST00000503274 TJP2Q9UDY2 1190 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms