RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 RAB44Q7Z6P3 723 aaPredicted RBP9.8□□□□□ -0.84
CRNDE-202ENST00000502066 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
CRNDE-202ENST00000502066 VPS8Q8N3P4 1428 aa9.8□□□□□ -0.84
CRNDE-202ENST00000502066 KRTAP9-6A0A140TA67 174 aa9.79□□□□□ -0.84
CRNDE-202ENST00000502066 LMOD1P29536 600 aaPredicted RBP9.79□□□□□ -0.84
CRNDE-202ENST00000502066 LAMC2Q13753 1193 aa9.79□□□□□ -0.84
CRNDE-202ENST00000502066 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
CRNDE-202ENST00000502066 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
CRNDE-202ENST00000502066 MDFIQ99750 246 aa9.79□□□□□ -0.84
CRNDE-202ENST00000502066 ZNF358Q9NW07 568 aa9.79□□□□□ -0.84
CRNDE-202ENST00000502066 ZNF232Q9UNY5 417 aa9.79□□□□□ -0.84
CRNDE-202ENST00000502066 STARD13Q9Y3M8 1113 aa9.79□□□□□ -0.84
CRNDE-202ENST00000502066 SKIP12755 728 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 NOS2P35228 1153 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 GTF2IP78347 998 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 ITPK1Q13572 414 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 COL9A3Q14050 684 aaPredicted RBP9.78□□□□□ -0.84
CRNDE-202ENST00000502066 GRIK4Q16099 956 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 WASHC4Q2M389 1173 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 USP50Q70EL3 339 aaPredicted RBP9.78□□□□□ -0.84
CRNDE-202ENST00000502066 OTOP1Q7RTM1 612 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 NEUROD4Q9HD90 331 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 KIF7Q2M1P5 1343 aa9.78□□□□□ -0.84
CRNDE-202ENST00000502066 LOC102724428A0A0B4J2F2 783 aa9.77□□□□□ -0.85
CRNDE-202ENST00000502066 H0YIN7 160 aa9.77□□□□□ -0.85
CRNDE-202ENST00000502066 BACH1O14867 736 aa9.77□□□□□ -0.85
CRNDE-202ENST00000502066 ALBP02768 609 aa9.77□□□□□ -0.85
CRNDE-202ENST00000502066 SIK1P57059 783 aa9.77□□□□□ -0.85
CRNDE-202ENST00000502066 GPC2Q8N158 579 aa9.77□□□□□ -0.85
CRNDE-202ENST00000502066 MON2Q7Z3U7 1717 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 SPDYE3A6NKU9 549 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 POLRMTO00411 1230 aaKnown RBP9.76□□□□□ -0.85
CRNDE-202ENST00000502066 SIN3BO75182 1162 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 EML3Q32P44 896 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 NOM1Q5C9Z4 860 aaKnown RBP9.76□□□□□ -0.85
CRNDE-202ENST00000502066 DEPDC4Q8N2C3 294 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 ANKRD24Q8TF21 1146 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 C7orf43Q8WVR3 580 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 ZNF622Q969S3 477 aaKnown RBP eCLIP9.76□□□□□ -0.852e-6■■□□□ 14.2
CRNDE-202ENST00000502066 HTATIP2Q9BUP3 242 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 PTPN22Q9Y2R2 807 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 MAP2P11137 1827 aaKnown RBP9.76□□□□□ -0.85
CRNDE-202ENST00000502066 BDP1A6H8Y1 2624 aa9.76□□□□□ -0.85
CRNDE-202ENST00000502066 EML1O00423 815 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 DYRK3O43781 588 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 TRIM28Q13263 835 aaKnown RBP9.75□□□□□ -0.85
CRNDE-202ENST00000502066 TEAD4Q15561 434 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 SLC9A9Q8IVB4 645 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 MICALL1Q8N3F8 863 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 ZCRB1Q8TBF4 217 aaKnown RBP9.75□□□□□ -0.85
CRNDE-202ENST00000502066 ADAMTS19Q8TE59 1207 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 ZNF333Q96JL9 665 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 ATRXP46100 2492 aa9.75□□□□□ -0.85
CRNDE-202ENST00000502066 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
CRNDE-202ENST00000502066 BMP8BP34820 402 aa9.74□□□□□ -0.85
CRNDE-202ENST00000502066 UHRF1Q96T88 793 aaPredicted RBP9.74□□□□□ -0.85
CRNDE-202ENST00000502066 CDX2Q99626 313 aaPredicted RBP9.74□□□□□ -0.85
CRNDE-202ENST00000502066 R3HDMLQ9H3Y0 253 aa9.74□□□□□ -0.85
CRNDE-202ENST00000502066 SRP68Q9UHB9 627 aaKnown RBP9.74□□□□□ -0.85
CRNDE-202ENST00000502066 ZDBF2Q9HCK1 2354 aa9.74□□□□□ -0.85
CRNDE-202ENST00000502066 NCOR1O75376 2440 aa9.73□□□□□ -0.85
CRNDE-202ENST00000502066 EPHA4P54764 986 aa9.73□□□□□ -0.85
CRNDE-202ENST00000502066 SPEM2Q0P670 501 aa9.73□□□□□ -0.85
CRNDE-202ENST00000502066 NCOA4Q13772 614 aa9.73□□□□□ -0.85
CRNDE-202ENST00000502066 FAM109BQ6ICB4 259 aaPredicted RBP9.73□□□□□ -0.85
CRNDE-202ENST00000502066 DLK2Q6UY11 383 aa9.73□□□□□ -0.85
CRNDE-202ENST00000502066 USP31Q70CQ4 1352 aa9.73□□□□□ -0.85
CRNDE-202ENST00000502066 AFDNP55196 1824 aaKnown RBP9.72□□□□□ -0.85
CRNDE-202ENST00000502066 CACNA1SQ13698 1873 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 ADH7P40394 386 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 NHLH1Q02575 133 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 TMEM31Q5JXX7 168 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 PRSS36Q5K4E3 855 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 KCNH5Q8NCM2 988 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 RHPN1Q8TCX5 695 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 HSH2DQ96JZ2 352 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 GDF15Q99988 308 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 ZNF277Q9NRM2 450 aaPredicted RBP9.72□□□□□ -0.85
CRNDE-202ENST00000502066 PIK3C2GO75747 1445 aa9.72□□□□□ -0.85
CRNDE-202ENST00000502066 SERTM1A2A2V5 107 aa9.71□□□□□ -0.86
CRNDE-202ENST00000502066 FZD9O00144 591 aa9.71□□□□□ -0.86
CRNDE-202ENST00000502066 TM4SF1P30408 202 aa9.71□□□□□ -0.86
CRNDE-202ENST00000502066 SOX11P35716 441 aa9.71□□□□□ -0.86
CRNDE-202ENST00000502066 C2orf69Q8N8R5 385 aa9.71□□□□□ -0.86
CRNDE-202ENST00000502066 TNFRSF25Q93038 417 aa9.71□□□□□ -0.86
CRNDE-202ENST00000502066 EPHX3Q9H6B9 360 aa9.71□□□□□ -0.86
CRNDE-202ENST00000502066 KMT2BQ9UMN6 2715 aaPredicted RBP9.71□□□□□ -0.86
CRNDE-202ENST00000502066 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
CRNDE-202ENST00000502066 NID1P14543 1247 aa9.7□□□□□ -0.86
CRNDE-202ENST00000502066 TBC1D8BQ0IIM8 1120 aa9.7□□□□□ -0.86
CRNDE-202ENST00000502066 CFAP70Q5T0N1 1121 aa9.7□□□□□ -0.86
CRNDE-202ENST00000502066 TDHQ8IZJ6 230 aa9.7□□□□□ -0.86
CRNDE-202ENST00000502066 CEP63Q96MT8 703 aa9.7□□□□□ -0.86
CRNDE-202ENST00000502066 C14orf93Q9H972 538 aaKnown RBP9.7□□□□□ -0.86
CRNDE-202ENST00000502066 GBA2Q9HCG7 927 aaPredicted RBP9.7□□□□□ -0.86
CRNDE-202ENST00000502066 TRAK1Q9UPV9 953 aa9.7□□□□□ -0.86
CRNDE-202ENST00000502066 ITGB4P16144 1822 aa9.7□□□□□ -0.86
CRNDE-202ENST00000502066 RGL3Q3MIN7 710 aa9.69□□□□□ -0.86
CRNDE-202ENST00000502066 CDC37L1Q7L3B6 337 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms