RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 C17orf53Q8N3J3 647 aaPredicted RBP10.39□□□□□ -0.75
FN1-227ENST00000498719 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 ZNF622Q969S3 477 aaKnown RBP eCLIP10.39□□□□□ -0.75
FN1-227ENST00000498719 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 TTC12Q9H892 705 aaPredicted RBP10.39□□□□□ -0.75
FN1-227ENST00000498719 SEPT3Q9UH03 358 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 PUF60Q9UHX1 559 aaKnown RBP10.39□□□□□ -0.75
FN1-227ENST00000498719 PRKAB1Q9Y478 270 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 COL18A1P39060 1754 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 ADAMTSL3P82987 1691 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 USP17L5A8MUK1 530 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 ATP5JP18859 108 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 PUS10Q3MIT2 529 aaKnown RBP10.39□□□□□ -0.75
FN1-227ENST00000498719 LMBR1LQ6UX01 489 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 CAPN12Q6ZSI9 719 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 FMNL2Q96PY5 1086 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 FANCLQ9NW38 375 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 DNMT3AQ9Y6K1 912 aaPredicted RBP10.39□□□□□ -0.75
FN1-227ENST00000498719 KIF1AQ12756 1690 aa10.39□□□□□ -0.75
FN1-227ENST00000498719 SORBS3O60504 671 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 RASA1P20936 1047 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 NBPF11Q86T75 865 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 C1orf216Q8TAB5 229 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.754e-14■□□□□ 8.6
FN1-227ENST00000498719 DDX11Q96FC9 970 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 DCAF5Q96JK2 942 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 RSPH9Q9H1X1 276 aaPredicted RBP10.38□□□□□ -0.75
FN1-227ENST00000498719 VTI1BQ9UEU0 232 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 DDX41Q9UJV9 622 aaKnown RBP10.38□□□□□ -0.75
FN1-227ENST00000498719 JCADQ9P266 1359 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 NBPF26B4DH59 902 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 TIMM44O43615 452 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 CYP21A2P08686 494 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 ATF3P18847 181 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 SCP2P22307 547 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 MCM5P33992 734 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 CABP4P57796 275 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 LONRF1Q17RB8 773 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 RABL6Q3YEC7 729 aaPredicted RBP10.38□□□□□ -0.75
FN1-227ENST00000498719 NBPF14Q5TI25 921 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 NBPF10Q6P3W6 841 aaKnown RBP10.38□□□□□ -0.75
FN1-227ENST00000498719 NBPF15Q8N660 670 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 FAM174AQ8TBP5 190 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 PPCSQ9HAB8 311 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 AS3MTQ9HBK9 375 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 LMTK3Q96Q04 1460 aa10.38□□□□□ -0.75
FN1-227ENST00000498719 A0A0G2JLW4 131 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 LETM1O95202 739 aaPredicted RBP10.37□□□□□ -0.75
FN1-227ENST00000498719 MAN1A1P33908 653 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 CASP7P55210 303 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 KRT85P78386 507 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 MAPRE1Q15691 268 aaKnown RBP10.37□□□□□ -0.75
FN1-227ENST00000498719 UVSSAQ2YD98 709 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 USPL1Q5W0Q7 1092 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 TTLL7Q6ZT98 887 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 TMC4Q7Z404 712 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.755e-83■■■■□ 23.8
FN1-227ENST00000498719 LZTS1Q9Y250 596 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 LAMA4Q16363 1823 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 RRP9O43818 475 aaKnown RBP10.37□□□□□ -0.75
FN1-227ENST00000498719 TIMM10P62072 90 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 FOXK1P85037 733 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 MST1RQ04912 1400 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 ANKRD1Q15327 319 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 Q6ZUG5 572 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 CKAP2LQ8IYA6 745 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 GTF3C2Q8WUA4 911 aaPredicted RBP10.37□□□□□ -0.75
FN1-227ENST00000498719 PRIMPOLQ96LW4 560 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 NEK1Q96PY6 1258 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 CDC5LQ99459 802 aaKnown RBP10.37□□□□□ -0.75
FN1-227ENST00000498719 HOMER2Q9NSB8 354 aa10.37□□□□□ -0.75
FN1-227ENST00000498719 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 UQCRHP07919 91 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 DSG3P32926 999 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 FOXO4P98177 505 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 TSGA10IPQ3SY00 556 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 STOX1Q6ZVD7 989 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 TAS1R3Q7RTX0 852 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 PXYLP1Q8TE99 480 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 ZNF594Q96JF6 807 aaPredicted RBP10.36□□□□□ -0.75
FN1-227ENST00000498719 HMG20BQ9P0W2 317 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 TMEM94Q12767 1356 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 GLI3P10071 1580 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 GOLIM4O00461 696 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 A1BGP04217 495 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 OCLNQ16625 522 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 BRDTQ58F21 947 aaPredicted RBP10.36□□□□□ -0.75
FN1-227ENST00000498719 SAMD3Q8N6K7 520 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 PAF1Q8N7H5 531 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 PLBD2Q8NHP8 589 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 HAUS7Q99871 368 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 PTPRHQ9HD43 1115 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 DACT1Q9NYF0 836 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 NUB1Q9Y5A7 615 aa10.36□□□□□ -0.75
FN1-227ENST00000498719 CLGNO14967 610 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 LGR5O75473 907 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 SKIP12755 728 aa10.35□□□□□ -0.75
FN1-227ENST00000498719 PDCP20941 246 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms