RNA–Protein interactions for RNA: ENST00000498439.1

CHTF18-213, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 673 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-213ENST00000498439 NR2E3Q9Y5X4 410 aa22.36■■□□□ 1.17
CHTF18-213ENST00000498439 ZSWIM8A7E2V4 1837 aa22.36■■□□□ 1.17
CHTF18-213ENST00000498439 COL2A1P02458 1487 aaPredicted RBP22.35■■□□□ 1.17
CHTF18-213ENST00000498439 CAP2P40123 477 aa22.35■■□□□ 1.17
CHTF18-213ENST00000498439 TRIM34Q9BYJ4 488 aa22.35■■□□□ 1.17
CHTF18-213ENST00000498439 GINM1Q9NU53 330 aa22.35■■□□□ 1.17
CHTF18-213ENST00000498439 SGPL1O95470 568 aa22.34■■□□□ 1.17
CHTF18-213ENST00000498439 FLT3LGP49771 235 aa22.34■■□□□ 1.17
CHTF18-213ENST00000498439 SPP2Q13103 211 aa22.34■■□□□ 1.17
CHTF18-213ENST00000498439 FAM110CQ1W6H9 321 aa22.34■■□□□ 1.17
CHTF18-213ENST00000498439 NAA16Q6N069 864 aaPredicted RBP22.34■■□□□ 1.17
CHTF18-213ENST00000498439 FOXP4Q8IVH2 680 aaPredicted RBP22.34■■□□□ 1.17
CHTF18-213ENST00000498439 TBC1D9Q6ZT07 1266 aa22.33■■□□□ 1.17
CHTF18-213ENST00000498439 CERS3Q8IU89 383 aa22.33■■□□□ 1.17
CHTF18-213ENST00000498439 U2AF1L4Q8WU68 220 aaKnown RBP22.33■■□□□ 1.17
CHTF18-213ENST00000498439 CLUAP1Q96AJ1 413 aa22.33■■□□□ 1.17
CHTF18-213ENST00000498439 GABRQQ9UN88 632 aa22.33■■□□□ 1.17
CHTF18-213ENST00000498439 COLQQ9Y215 455 aaPredicted RBP22.33■■□□□ 1.17
CHTF18-213ENST00000498439 CENPFP49454 3210 aa22.33■■□□□ 1.17
CHTF18-213ENST00000498439 HTTP42858 3142 aa22.32■■□□□ 1.16
CHTF18-213ENST00000498439 PTPRFP10586 1907 aa22.32■■□□□ 1.16
CHTF18-213ENST00000498439 PNMA6EA0A0J9YXQ4 647 aa22.32■■□□□ 1.16
CHTF18-213ENST00000498439 H0YGN5 161 aa22.32■■□□□ 1.16
CHTF18-213ENST00000498439 MCAMP43121 646 aa22.32■■□□□ 1.16
CHTF18-213ENST00000498439 ATP8B2P98198 1209 aa22.32■■□□□ 1.16
CHTF18-213ENST00000498439 ANKRD13CQ8N6S4 541 aa22.32■■□□□ 1.16
CHTF18-213ENST00000498439 BCAR3O75815 825 aa22.31■■□□□ 1.16
CHTF18-213ENST00000498439 TFRCP02786 760 aaKnown RBP22.31■■□□□ 1.16
CHTF18-213ENST00000498439 ASNSP08243 561 aa22.31■■□□□ 1.16
CHTF18-213ENST00000498439 PPP4CP60510 307 aa22.31■■□□□ 1.16
CHTF18-213ENST00000498439 SH3D19Q5HYK7 790 aa22.31■■□□□ 1.16
CHTF18-213ENST00000498439 ZNF512BQ96KM6 892 aaPredicted RBP22.31■■□□□ 1.16
CHTF18-213ENST00000498439 TMOD4Q9NZQ9 345 aa22.31■■□□□ 1.16
CHTF18-213ENST00000498439 PHIPQ8WWQ0 1821 aa22.31■■□□□ 1.16
CHTF18-213ENST00000498439 C19orf81C9J6K1 198 aa22.3■■□□□ 1.16
CHTF18-213ENST00000498439 SURF6O75683 361 aaKnown RBP22.3■■□□□ 1.16
CHTF18-213ENST00000498439 TNNI3KQ59H18 835 aa22.3■■□□□ 1.16
CHTF18-213ENST00000498439 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
CHTF18-213ENST00000498439 CRACR2BQ8N4Y2 399 aaPredicted RBP22.3■■□□□ 1.16
CHTF18-213ENST00000498439 SHISA4Q96DD7 197 aa22.3■■□□□ 1.16
CHTF18-213ENST00000498439 FPGT-TNNI3KV9GXZ4 949 aa22.3■■□□□ 1.16
CHTF18-213ENST00000498439 HLA-DOAP06340 250 aa22.29■■□□□ 1.16
CHTF18-213ENST00000498439 TMED8Q6PL24 325 aaPredicted RBP22.29■■□□□ 1.16
CHTF18-213ENST00000498439 ZNF384Q8TF68 577 aa22.29■■□□□ 1.16
CHTF18-213ENST00000498439 WDR18Q9BV38 432 aa22.29■■□□□ 1.16
CHTF18-213ENST00000498439 AATFQ9NY61 560 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHTF18-213ENST00000498439 TAOK2Q9UL54 1235 aa22.29■■□□□ 1.16
CHTF18-213ENST00000498439 FARP2O94887 1054 aaPredicted RBP22.28■■□□□ 1.16
CHTF18-213ENST00000498439 INHAP05111 366 aa22.28■■□□□ 1.16
CHTF18-213ENST00000498439 FXR1P51114 621 aaKnown RBP eCLIP22.28■■□□□ 1.16
CHTF18-213ENST00000498439 HMGCS2P54868 508 aa22.28■■□□□ 1.16
CHTF18-213ENST00000498439 IRX3P78415 501 aaPredicted RBP22.28■■□□□ 1.16
CHTF18-213ENST00000498439 POLA2Q14181 598 aa22.28■■□□□ 1.16
CHTF18-213ENST00000498439 TREML2Q5T2D2 321 aa22.28■■□□□ 1.16
CHTF18-213ENST00000498439 PI16Q6UXB8 463 aa22.28■■□□□ 1.16
CHTF18-213ENST00000498439 TMEM57Q8N5G2 664 aa22.28■■□□□ 1.16
CHTF18-213ENST00000498439 SSH3Q8TE77 659 aa22.28■■□□□ 1.16
CHTF18-213ENST00000498439 SH3RF3Q8TEJ3 882 aaPredicted RBP22.28■■□□□ 1.16
CHTF18-213ENST00000498439 UNC93B1Q9H1C4 597 aa22.28■■□□□ 1.16
CHTF18-213ENST00000498439 GTF3C2Q8WUA4 911 aaPredicted RBP22.27■■□□□ 1.16
CHTF18-213ENST00000498439 TGFBRAP1Q8WUH2 860 aa22.27■■□□□ 1.16
CHTF18-213ENST00000498439 FAM196BA6NMK8 535 aa22.26■■□□□ 1.15
CHTF18-213ENST00000498439 BACE1P56817 501 aa22.26■■□□□ 1.15
CHTF18-213ENST00000498439 UBE2Q1Q7Z7E8 422 aa22.26■■□□□ 1.15
CHTF18-213ENST00000498439 ASCC2Q9H1I8 757 aaPredicted RBP22.26■■□□□ 1.15
CHTF18-213ENST00000498439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.26■■□□□ 1.15
CHTF18-213ENST00000498439 ATAD5Q96QE3 1844 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 USP17L10C9JJH3 530 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 EVI5O60447 810 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 SLURP2P0DP57 97 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 ELNP15502 786 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 HOXA7P31268 230 aaPredicted RBP22.25■■□□□ 1.15
CHTF18-213ENST00000498439 CHRDL2Q6WN34 429 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 CCDC84Q86UT8 332 aaPredicted RBP22.25■■□□□ 1.15
CHTF18-213ENST00000498439 CCAR1Q8IX12 1150 aaKnown RBP22.25■■□□□ 1.15
CHTF18-213ENST00000498439 ANKLE1Q8NAG6 615 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 DEFB118Q96PH6 123 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 SNRKQ9NRH2 765 aa22.25■■□□□ 1.15
CHTF18-213ENST00000498439 NOP58Q9Y2X3 529 aaKnown RBP22.25■■□□□ 1.15
CHTF18-213ENST00000498439 MKI67P46013 3256 aaKnown RBP22.25■■□□□ 1.15
CHTF18-213ENST00000498439 HMGCRP04035 888 aa22.24■■□□□ 1.15
CHTF18-213ENST00000498439 MAPKAPK5Q8IW41 473 aa22.24■■□□□ 1.15
CHTF18-213ENST00000498439 TRMT44Q8IYL2 757 aaKnown RBP22.24■■□□□ 1.15
CHTF18-213ENST00000498439 DBNDD2Q9BQY9 259 aa22.24■■□□□ 1.15
CHTF18-213ENST00000498439 HMX1Q9NP08 348 aaPredicted RBP22.24■■□□□ 1.15
CHTF18-213ENST00000498439 PAK6Q9NQU5 681 aaPredicted RBP22.24■■□□□ 1.15
CHTF18-213ENST00000498439 DOCK3Q8IZD9 2030 aa22.24■■□□□ 1.15
CHTF18-213ENST00000498439 CYP2E1P05181 493 aaPredicted RBP22.23■■□□□ 1.15
CHTF18-213ENST00000498439 NECAB2Q7Z6G3 386 aa22.23■■□□□ 1.15
CHTF18-213ENST00000498439 METTL16Q86W50 562 aaKnown RBP22.23■■□□□ 1.15
CHTF18-213ENST00000498439 ERC1Q8IUD2 1116 aa22.23■■□□□ 1.15
CHTF18-213ENST00000498439 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.23■■□□□ 1.15
CHTF18-213ENST00000498439 MORF4L1Q9UBU8 362 aa22.23■■□□□ 1.15
CHTF18-213ENST00000498439 RPTORQ8N122 1335 aa22.23■■□□□ 1.15
CHTF18-213ENST00000498439 BRCA2P51587 3418 aa22.22■■□□□ 1.15
CHTF18-213ENST00000498439 HSP90AB4PQ58FF6 505 aa22.22■■□□□ 1.15
CHTF18-213ENST00000498439 ITPRIPQ8IWB1 547 aa22.22■■□□□ 1.15
CHTF18-213ENST00000498439 GPRC5AQ8NFJ5 357 aa22.22■■□□□ 1.15
CHTF18-213ENST00000498439 NUDT12Q9BQG2 462 aa22.22■■□□□ 1.15
CHTF18-213ENST00000498439 LOC285556D6RIA3 1793 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms