RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 MSCO60682 206 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 GPR37L1O60883 481 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 RGS2P41220 211 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 NFIAQ12857 509 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 CCDC85BQ15834 202 aaPredicted RBP11.37□□□□□ -0.59
FAM3D-205ENST00000498347 LMBR1LQ6UX01 489 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 ZFPM1Q8IX07 1006 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 C8orf58Q8NAV2 365 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 ARRDC4Q8NCT1 418 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 GPRC5AQ8NFJ5 357 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 USP6NLQ92738 828 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 TIFAQ96CG3 184 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 NECAB3Q96P71 396 aaPredicted RBP11.37□□□□□ -0.59
FAM3D-205ENST00000498347 ASCC2Q9H1I8 757 aaPredicted RBP11.37□□□□□ -0.59
FAM3D-205ENST00000498347 USP40Q9NVE5 1235 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 FAM198AQ9UFP1 575 aa11.37□□□□□ -0.59
FAM3D-205ENST00000498347 ZBED9Q6R2W3 1325 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 TRIM43BA6NCK2 446 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 MAPK4P31152 587 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 GNAI1P63096 354 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 HNRNPUQ00839 825 aaKnown RBP eCLIP11.36□□□□□ -0.59
FAM3D-205ENST00000498347 CCL14Q16627 93 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 AAK1Q2M2I8 961 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 MFSD14CQ5VZR4 134 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 CCAR1Q8IX12 1150 aaKnown RBP11.36□□□□□ -0.59
FAM3D-205ENST00000498347 LINS1Q8NG48 757 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 TRIM43Q96BQ3 446 aaPredicted RBP11.36□□□□□ -0.59
FAM3D-205ENST00000498347 RUNDC1Q96C34 613 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 CXXC1Q9P0U4 656 aaPredicted RBP11.36□□□□□ -0.59
FAM3D-205ENST00000498347 DDX20Q9UHI6 824 aaKnown RBP11.36□□□□□ -0.59
FAM3D-205ENST00000498347 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
FAM3D-205ENST00000498347 MRE11P49959 708 aa11.35□□□□□ -0.59
FAM3D-205ENST00000498347 SPP2Q13103 211 aa11.35□□□□□ -0.59
FAM3D-205ENST00000498347 CCDC146Q8IYE0 955 aa11.35□□□□□ -0.59
FAM3D-205ENST00000498347 IFT57Q9NWB7 429 aa11.35□□□□□ -0.59
FAM3D-205ENST00000498347 PPP4R2Q9NY27 417 aa11.35□□□□□ -0.59
FAM3D-205ENST00000498347 ENTPD3O75355 529 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 IGFBP4P22692 258 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 CNGA1P29973 690 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 MORN1Q5T089 497 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 SH3RF1Q7Z6J0 888 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 PLEKHH3Q7Z736 793 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 ZSCAN29Q8IWY8 852 aaPredicted RBP11.34□□□□□ -0.59
FAM3D-205ENST00000498347 ZNF280CQ8ND82 737 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 EDC3Q96F86 508 aaKnown RBP11.34□□□□□ -0.59
FAM3D-205ENST00000498347 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 PRDM12Q9H4Q4 367 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 PDLIM7Q9NR12 457 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 DAGLAQ9Y4D2 1042 aa11.34□□□□□ -0.59
FAM3D-205ENST00000498347 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
FAM3D-205ENST00000498347 EPHB4P54760 987 aa11.33□□□□□ -0.6
FAM3D-205ENST00000498347 HMGCS2P54868 508 aa11.33□□□□□ -0.6
FAM3D-205ENST00000498347 CALD1Q05682 793 aaKnown RBP11.33□□□□□ -0.6
FAM3D-205ENST00000498347 SNX17Q15036 470 aa11.33□□□□□ -0.6
FAM3D-205ENST00000498347 TRIM60Q495X7 471 aa11.33□□□□□ -0.6
FAM3D-205ENST00000498347 GJC2Q5T442 439 aaPredicted RBP11.33□□□□□ -0.6
FAM3D-205ENST00000498347 C1orf53Q5VUE5 145 aa11.33□□□□□ -0.6
FAM3D-205ENST00000498347 G2E3Q7L622 706 aa11.33□□□□□ -0.6
FAM3D-205ENST00000498347 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
FAM3D-205ENST00000498347 PRKRIP1Q9H875 184 aaPredicted RBP11.33□□□□□ -0.6
FAM3D-205ENST00000498347 TCF20Q9UGU0 1960 aaKnown RBP11.33□□□□□ -0.6
FAM3D-205ENST00000498347 KBTBD13C9JR72 458 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 GLRX3O76003 335 aaKnown RBP11.32□□□□□ -0.6
FAM3D-205ENST00000498347 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
FAM3D-205ENST00000498347 IRX3P78415 501 aaPredicted RBP11.32□□□□□ -0.6
FAM3D-205ENST00000498347 ATP2B2Q01814 1243 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 MAP2K5Q13163 448 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 ADGRE1Q14246 886 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 Q3C1V9 767 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 GPR142Q7Z601 462 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 CCDC84Q86UT8 332 aaPredicted RBP11.32□□□□□ -0.6
FAM3D-205ENST00000498347 DNAAF4Q8WXU2 420 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 APBA2Q99767 749 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 IDI2Q9BXS1 227 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
FAM3D-205ENST00000498347 RBPJLQ9UBG7 517 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 CDH23Q9H251 3354 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 UTYO14607 1347 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 MROH5Q6ZUA9 1318 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 MYBBP1AQ9BQG0 1328 aaKnown RBP11.32□□□□□ -0.6
FAM3D-205ENST00000498347 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
FAM3D-205ENST00000498347 ATRNL1Q5VV63 1379 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 SMIM22K7EJ46 135 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 TBC1D12O60347 775 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 RAG1P15918 1043 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 RGS3P49796 1198 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 TLE2Q04725 743 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 FPGSQ05932 587 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 EPHA10Q5JZY3 1008 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 CCDC129Q6ZRS4 1044 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 SH3BP5LQ7L8J4 393 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
FAM3D-205ENST00000498347 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.31□□□□□ -0.6
FAM3D-205ENST00000498347 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
FAM3D-205ENST00000498347 DDTLA6NHG4 134 aaPredicted RBP11.3□□□□□ -0.6
FAM3D-205ENST00000498347 USP17L5A8MUK1 530 aa11.3□□□□□ -0.6
FAM3D-205ENST00000498347 KIAA0355O15063 1070 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms