RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 MPP2Q14168 576 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 INPP5AQ14642 412 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 LDLRAD1Q5T700 205 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 ZDHHC13Q8IUH4 622 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 SHKBP1Q8TBC3 707 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 JARID2Q92833 1246 aaPredicted RBP7.95□□□□□ -1.14
SSR3-209ENST00000498205 C1GALT1Q9NS00 363 aa7.95□□□□□ -1.14
SSR3-209ENST00000498205 MINDY4BA8MYZ0 360 aa7.94□□□□□ -1.14
SSR3-209ENST00000498205 WDR64B1ANS9 1081 aa7.94□□□□□ -1.14
SSR3-209ENST00000498205 ETF1P62495 437 aaKnown RBP7.94□□□□□ -1.14
SSR3-209ENST00000498205 ZMYM1Q5SVZ6 1142 aa7.94□□□□□ -1.14
SSR3-209ENST00000498205 OGFOD3Q6PK18 319 aa7.94□□□□□ -1.14
SSR3-209ENST00000498205 HID1Q8IV36 788 aa7.94□□□□□ -1.14
SSR3-209ENST00000498205 ADAM30Q9UKF2 790 aa7.94□□□□□ -1.14
SSR3-209ENST00000498205 LEMD3Q9Y2U8 911 aa7.94□□□□□ -1.14
SSR3-209ENST00000498205 CSADQ9Y600 493 aa7.94□□□□□ -1.14
SSR3-209ENST00000498205 FAM221AA4D161 298 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 COBLO75128 1261 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 LRIG2O94898 1065 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 F13BP05160 661 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 NTF4P34130 210 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.93□□□□□ -1.14
SSR3-209ENST00000498205 FAM196AQ6ZSG2 479 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 FBXL6Q8N531 539 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 GOLM1Q8NBJ4 401 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 LRRC3Q9BY71 257 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 PIM2Q9P1W9 311 aa7.93□□□□□ -1.14
SSR3-209ENST00000498205 F13A1P00488 732 aa7.92□□□□□ -1.14
SSR3-209ENST00000498205 CWF19L2Q2TBE0 894 aaKnown RBP7.92□□□□□ -1.14
SSR3-209ENST00000498205 USP48Q86UV5 1035 aa7.92□□□□□ -1.14
SSR3-209ENST00000498205 MFSD2AQ8NA29 543 aa7.92□□□□□ -1.14
SSR3-209ENST00000498205 GATA6Q92908 595 aa7.92□□□□□ -1.14
SSR3-209ENST00000498205 GREM1O60565 184 aa7.91□□□□□ -1.14
SSR3-209ENST00000498205 MLECQ14165 292 aa7.91□□□□□ -1.14
SSR3-209ENST00000498205 ZNF746Q6NUN9 644 aaPredicted RBP7.91□□□□□ -1.14
SSR3-209ENST00000498205 BNC2Q6ZN30 1099 aaPredicted RBP7.91□□□□□ -1.14
SSR3-209ENST00000498205 PSMG3-AS1Q96PY0 264 aa7.91□□□□□ -1.14
SSR3-209ENST00000498205 PRR36Q9H6K5 1346 aa7.91□□□□□ -1.14
SSR3-209ENST00000498205 PRR19A6NJB7 356 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 PGRP06401 933 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 GARTP22102 1010 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 GRK4P32298 578 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 ADMP35318 185 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 LRP8Q14114 963 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 SLC6A19Q695T7 634 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 FBXL19Q6PCT2 694 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 REC114Q7Z4M0 266 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 KIAA0825Q8IV33 1275 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 MRPL41Q8IXM3 137 aaKnown RBP7.9□□□□□ -1.14
SSR3-209ENST00000498205 ZNF296Q8WUU4 475 aaPredicted RBP7.9□□□□□ -1.14
SSR3-209ENST00000498205 SPATA32Q96LK8 384 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 NT5C1AQ9BXI3 368 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 FOXQ1Q9C009 403 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 MKNK2Q9HBH9 465 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 COPRSQ9NQ92 184 aa7.9□□□□□ -1.14
SSR3-209ENST00000498205 KIAA1522Q9P206 1035 aaPredicted RBP7.9□□□□□ -1.14
SSR3-209ENST00000498205 UNCXA6NJT0 531 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 DYNC1LI2O43237 492 aaPredicted RBP7.89□□□□□ -1.15
SSR3-209ENST00000498205 FOSL1P15407 271 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 FAM160A1Q05DH4 1040 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 TMEM201Q5SNT2 666 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 COX4I2Q96KJ9 171 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 SPON2Q9BUD6 331 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 DUSP23Q9BVJ7 150 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 PRDM10Q9NQV6 1147 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 GTF2IRD1Q9UHL9 959 aa7.89□□□□□ -1.15
SSR3-209ENST00000498205 F6X3S4 739 aa7.88□□□□□ -1.15
SSR3-209ENST00000498205 CYP26A1O43174 497 aa7.88□□□□□ -1.15
SSR3-209ENST00000498205 TGFB1P01137 390 aa7.88□□□□□ -1.15
SSR3-209ENST00000498205 FAM87AP0C7U9 286 aa7.88□□□□□ -1.15
SSR3-209ENST00000498205 CDK5R2Q13319 367 aa7.88□□□□□ -1.15
SSR3-209ENST00000498205 ZNF765Q7L2R6 523 aa7.88□□□□□ -1.15
SSR3-209ENST00000498205 MCATQ8IVS2 390 aaKnown RBP7.88□□□□□ -1.15
SSR3-209ENST00000498205 ZNF654Q8IZM8 581 aa7.88□□□□□ -1.15
SSR3-209ENST00000498205 LGR6Q9HBX8 967 aa7.88□□□□□ -1.15
SSR3-209ENST00000498205 FAM170BA6NMN3 283 aa7.87□□□□□ -1.15
SSR3-209ENST00000498205 CD97P48960 835 aa7.87□□□□□ -1.15
SSR3-209ENST00000498205 CDK8P49336 464 aa7.87□□□□□ -1.15
SSR3-209ENST00000498205 YARSP54577 528 aaKnown RBP7.87□□□□□ -1.15
SSR3-209ENST00000498205 SLBPQ14493 270 aaKnown RBP eCLIP7.87□□□□□ -1.15
SSR3-209ENST00000498205 ARMCX6Q7L4S7 300 aa7.87□□□□□ -1.15
SSR3-209ENST00000498205 REXO1Q8N1G1 1221 aaKnown RBP7.87□□□□□ -1.15
SSR3-209ENST00000498205 TMEM87BQ96K49 555 aa7.87□□□□□ -1.15
SSR3-209ENST00000498205 ADAMTS1Q9UHI8 967 aa7.87□□□□□ -1.15
SSR3-209ENST00000498205 SCO2A0A1W2PP80 73 aa7.86□□□□□ -1.15
SSR3-209ENST00000498205 KIAA1324LA8MWY0 1029 aaPredicted RBP7.86□□□□□ -1.15
SSR3-209ENST00000498205 IGF2BP3O00425 579 aaKnown RBP eCLIP7.86□□□□□ -1.15
SSR3-209ENST00000498205 CST3P01034 146 aaPredicted RBP7.86□□□□□ -1.15
SSR3-209ENST00000498205 PLCG1P19174 1290 aa7.86□□□□□ -1.15
SSR3-209ENST00000498205 APOBRQ0VD83 1088 aa7.86□□□□□ -1.15
SSR3-209ENST00000498205 DDX41Q9UJV9 622 aaKnown RBP7.86□□□□□ -1.15
SSR3-209ENST00000498205 ATE1O95260 518 aa7.85□□□□□ -1.15
SSR3-209ENST00000498205 CYP7A1P22680 504 aa7.85□□□□□ -1.15
SSR3-209ENST00000498205 ZNF165P49910 485 aa7.85□□□□□ -1.15
SSR3-209ENST00000498205 COL9A2Q14055 689 aaPredicted RBP7.85□□□□□ -1.15
SSR3-209ENST00000498205 ARTNQ5T4W7 220 aa7.85□□□□□ -1.15
SSR3-209ENST00000498205 ARHGAP27Q6ZUM4 889 aa7.85□□□□□ -1.15
SSR3-209ENST00000498205 METTL16Q86W50 562 aaKnown RBP7.85□□□□□ -1.15
SSR3-209ENST00000498205 TOP6BLQ8N6T0 577 aa7.85□□□□□ -1.15
SSR3-209ENST00000498205 NKD1Q969G9 470 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms