RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 IGF2BP3O00425 579 aaKnown RBP eCLIP20.19■□□□□ 0.82
ABCF3-218ENST00000498136 IRF6O14896 467 aa20.19■□□□□ 0.82
ABCF3-218ENST00000498136 TBC1D12O60347 775 aa20.19■□□□□ 0.82
ABCF3-218ENST00000498136 MX1P20591 662 aa20.19■□□□□ 0.82
ABCF3-218ENST00000498136 MAP3K10Q02779 954 aa20.19■□□□□ 0.82
ABCF3-218ENST00000498136 SNAPC2Q13487 334 aa20.19■□□□□ 0.82
ABCF3-218ENST00000498136 SCYL3Q8IZE3 742 aa20.19■□□□□ 0.82
ABCF3-218ENST00000498136 MS4A4AQ96JQ5 239 aa20.19■□□□□ 0.82
ABCF3-218ENST00000498136 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
ABCF3-218ENST00000498136 HERC5Q9UII4 1024 aaKnown RBP20.19■□□□□ 0.82
ABCF3-218ENST00000498136 NAV1Q8NEY1 1877 aa20.19■□□□□ 0.82
ABCF3-218ENST00000498136 SIPA1L1O43166 1804 aa20.18■□□□□ 0.82
ABCF3-218ENST00000498136 ATAD5Q96QE3 1844 aa20.18■□□□□ 0.82
ABCF3-218ENST00000498136 CTNND1O60716 968 aaKnown RBP20.18■□□□□ 0.82
ABCF3-218ENST00000498136 SLFNL1Q499Z3 407 aa20.18■□□□□ 0.82
ABCF3-218ENST00000498136 B4GALNT3Q6L9W6 998 aa20.18■□□□□ 0.82
ABCF3-218ENST00000498136 TESPA1A2RU30 521 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-218ENST00000498136 GLRX3O76003 335 aaKnown RBP20.17■□□□□ 0.82
ABCF3-218ENST00000498136 CETPP11597 493 aa20.17■□□□□ 0.82
ABCF3-218ENST00000498136 LCORLQ8N3X6 602 aa20.17■□□□□ 0.82
ABCF3-218ENST00000498136 BRI3BPQ8WY22 251 aa20.17■□□□□ 0.82
ABCF3-218ENST00000498136 ARMT1Q9H993 441 aa20.17■□□□□ 0.82
ABCF3-218ENST00000498136 MBD4O95243 580 aa20.16■□□□□ 0.82
ABCF3-218ENST00000498136 IGHDP01880 384 aa20.16■□□□□ 0.82
ABCF3-218ENST00000498136 KBTBD3Q8NAB2 608 aa20.16■□□□□ 0.82
ABCF3-218ENST00000498136 PTPN18Q99952 460 aa20.16■□□□□ 0.82
ABCF3-218ENST00000498136 ZHX2Q9Y6X8 837 aa20.16■□□□□ 0.82
ABCF3-218ENST00000498136 CHGBP05060 677 aa20.15■□□□□ 0.82
ABCF3-218ENST00000498136 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-218ENST00000498136 PTPRAP18433 802 aa20.15■□□□□ 0.82
ABCF3-218ENST00000498136 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
ABCF3-218ENST00000498136 FOXP4Q8IVH2 680 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-218ENST00000498136 PI4K2BQ8TCG2 481 aa20.15■□□□□ 0.82
ABCF3-218ENST00000498136 SDR42E1Q8WUS8 393 aa20.15■□□□□ 0.82
ABCF3-218ENST00000498136 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
ABCF3-218ENST00000498136 TTC6Q86TZ1 520 aa20.14■□□□□ 0.81
ABCF3-218ENST00000498136 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
ABCF3-218ENST00000498136 MCM9Q9NXL9 1143 aa20.14■□□□□ 0.81
ABCF3-218ENST00000498136 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.14■□□□□ 0.81
ABCF3-218ENST00000498136 GPR25O00155 361 aa20.13■□□□□ 0.81
ABCF3-218ENST00000498136 CAP2P40123 477 aa20.13■□□□□ 0.81
ABCF3-218ENST00000498136 TAF1CQ15572 869 aaPredicted RBP20.13■□□□□ 0.81
ABCF3-218ENST00000498136 LRRFIP1Q32MZ4 808 aaKnown RBP20.13■□□□□ 0.81
ABCF3-218ENST00000498136 CCDC84Q86UT8 332 aaPredicted RBP20.13■□□□□ 0.81
ABCF3-218ENST00000498136 FAM43AQ8N2R8 423 aa20.13■□□□□ 0.81
ABCF3-218ENST00000498136 ZNF296Q8WUU4 475 aaPredicted RBP20.13■□□□□ 0.81
ABCF3-218ENST00000498136 CFHR5Q9BXR6 569 aa20.13■□□□□ 0.81
ABCF3-218ENST00000498136 R3HDMLQ9H3Y0 253 aa20.13■□□□□ 0.81
ABCF3-218ENST00000498136 KCNH4Q9UQ05 1017 aa20.13■□□□□ 0.81
ABCF3-218ENST00000498136 PHIPQ8WWQ0 1821 aa20.13■□□□□ 0.81
ABCF3-218ENST00000498136 DDX60LQ5H9U9 1706 aaKnown RBP20.13■□□□□ 0.81
ABCF3-218ENST00000498136 SALL3Q9BXA9 1300 aa20.12■□□□□ 0.81
ABCF3-218ENST00000498136 BTBD19C9JJ37 291 aa20.12■□□□□ 0.81
ABCF3-218ENST00000498136 CXCL11O14625 94 aa20.12■□□□□ 0.81
ABCF3-218ENST00000498136 CRHR2Q13324 411 aa20.12■□□□□ 0.81
ABCF3-218ENST00000498136 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
ABCF3-218ENST00000498136 FSD1Q9BTV5 496 aa20.12■□□□□ 0.81
ABCF3-218ENST00000498136 PUS7LQ9H0K6 701 aaKnown RBP20.12■□□□□ 0.81
ABCF3-218ENST00000498136 DNAJC18Q9H819 358 aa20.12■□□□□ 0.81
ABCF3-218ENST00000498136 SERPINB13Q9UIV8 391 aa20.12■□□□□ 0.81
ABCF3-218ENST00000498136 BAZ2AQ9UIF9 1905 aaKnown RBP20.12■□□□□ 0.81
ABCF3-218ENST00000498136 TRIM75PA6NK02 468 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 RNF113AO15541 343 aaKnown RBP20.11■□□□□ 0.81
ABCF3-218ENST00000498136 PRKAB2O43741 272 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 FKTNO75072 461 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 GDF11O95390 407 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 ZFYP08048 801 aaPredicted RBP20.11■□□□□ 0.81
ABCF3-218ENST00000498136 PDE1AP54750 535 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 DGKZQ13574 1117 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 RRP1BQ14684 758 aaKnown RBP20.11■□□□□ 0.81
ABCF3-218ENST00000498136 ZFYVE28Q9HCC9 887 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 DCP1AQ9NPI6 582 aaPredicted RBP20.11■□□□□ 0.81
ABCF3-218ENST00000498136 AFG3L2Q9Y4W6 797 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 SLC4A4Q9Y6R1 1079 aa20.11■□□□□ 0.81
ABCF3-218ENST00000498136 GADL1Q6ZQY3 521 aa20.1■□□□□ 0.81
ABCF3-218ENST00000498136 METTL16Q86W50 562 aaKnown RBP20.1■□□□□ 0.81
ABCF3-218ENST00000498136 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
ABCF3-218ENST00000498136 AMOTL1Q8IY63 956 aa20.1■□□□□ 0.81
ABCF3-218ENST00000498136 APPBP2Q92624 585 aa20.1■□□□□ 0.81
ABCF3-218ENST00000498136 PTPRFP10586 1907 aa20.1■□□□□ 0.81
ABCF3-218ENST00000498136 USP17L5A8MUK1 530 aa20.09■□□□□ 0.81
ABCF3-218ENST00000498136 ASNSP08243 561 aa20.09■□□□□ 0.81
ABCF3-218ENST00000498136 PLCD1P51178 756 aa20.09■□□□□ 0.81
ABCF3-218ENST00000498136 NUCB1Q02818 461 aa20.09■□□□□ 0.81
ABCF3-218ENST00000498136 NOM1Q5C9Z4 860 aaKnown RBP20.09■□□□□ 0.81
ABCF3-218ENST00000498136 EHD4Q9H223 541 aa20.09■□□□□ 0.81
ABCF3-218ENST00000498136 AS3MTQ9HBK9 375 aa20.09■□□□□ 0.81
ABCF3-218ENST00000498136 ATP8A2Q9NTI2 1148 aa20.09■□□□□ 0.81
ABCF3-218ENST00000498136 STAP2Q9UGK3 403 aa20.09■□□□□ 0.81
ABCF3-218ENST00000498136 FASTKD5Q7L8L6 764 aaKnown RBP20.08■□□□□ 0.81
ABCF3-218ENST00000498136 ANKRD23Q86SG2 305 aa20.08■□□□□ 0.81
ABCF3-218ENST00000498136 OSBP2Q969R2 916 aa20.08■□□□□ 0.81
ABCF3-218ENST00000498136 TBC1D2Q9BYX2 928 aa20.08■□□□□ 0.81
ABCF3-218ENST00000498136 ZCCHC17Q9NP64 241 aaKnown RBP20.08■□□□□ 0.81
ABCF3-218ENST00000498136 MYH8P13535 1937 aa20.08■□□□□ 0.8
ABCF3-218ENST00000498136 A0A0G2JLL6 359 aaPredicted RBP20.07■□□□□ 0.8
ABCF3-218ENST00000498136 PDHXO00330 501 aa20.07■□□□□ 0.8
ABCF3-218ENST00000498136 CAPN15O75808 1086 aa20.07■□□□□ 0.8
ABCF3-218ENST00000498136 SPP2Q13103 211 aa20.07■□□□□ 0.8
ABCF3-218ENST00000498136 IFFO2Q5TF58 517 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms