RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 DAGLAQ9Y4D2 1042 aa4.87□□□□□ -1.63
RIF1-212ENST00000498041 CSADQ9Y600 493 aa4.87□□□□□ -1.63
RIF1-212ENST00000498041 UNCXA6NJT0 531 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 MINDY4BA8MYZ0 360 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 F6X3S4 739 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 FANCGO15287 622 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 RECKO95980 971 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 PF4P02776 101 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 SPINK2P20155 84 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 ZNF76P36508 570 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 CAMK2GQ13555 558 aaPredicted RBP4.86□□□□□ -1.63
RIF1-212ENST00000498041 INPP5AQ14642 412 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.86□□□□□ -1.63
RIF1-212ENST00000498041 CYFIP1Q7L576 1253 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 FBXL6Q8N531 539 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 GIMAP7Q8NHV1 300 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 PLPPR2Q96GM1 343 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 RHOVQ96L33 236 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 MFSD14AQ96MC6 490 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 SSU72Q9NP77 194 aaKnown RBP4.86□□□□□ -1.63
RIF1-212ENST00000498041 COPRSQ9NQ92 184 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 PRKAG2Q9UGJ0 569 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 PCOLCE2Q9UKZ9 415 aa4.86□□□□□ -1.63
RIF1-212ENST00000498041 PRR19A6NJB7 356 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 SCAMP3O14828 347 aaKnown RBP4.85□□□□□ -1.63
RIF1-212ENST00000498041 NEFMP07197 916 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 HOXA10P31260 410 aaPredicted RBP4.85□□□□□ -1.63
RIF1-212ENST00000498041 RPL6Q02878 288 aaKnown RBP4.85□□□□□ -1.63
RIF1-212ENST00000498041 WIPI1Q5MNZ9 446 aaPredicted RBP4.85□□□□□ -1.63
RIF1-212ENST00000498041 SNAP47Q5SQN1 464 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 ZBTB37Q5TC79 503 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 SEZ6L2Q6UXD5 910 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.85□□□□□ -1.63
RIF1-212ENST00000498041 KCT2Q8NC54 265 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 GATAD2BQ8WXI9 593 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 RNF34Q969K3 372 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 ISL2Q96A47 359 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 TBC1D32Q96NH3 1257 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 LGR6Q9HBX8 967 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 KIAA1522Q9P206 1035 aaPredicted RBP4.85□□□□□ -1.63
RIF1-212ENST00000498041 ANGEL1Q9UNK9 670 aaKnown RBP4.85□□□□□ -1.63
RIF1-212ENST00000498041 TACC3Q9Y6A5 838 aa4.85□□□□□ -1.63
RIF1-212ENST00000498041 PRAMEF27A3QJZ7 478 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 GFRA2O00451 464 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 DYNC1LI2O43237 492 aaPredicted RBP4.84□□□□□ -1.63
RIF1-212ENST00000498041 CILPO75339 1184 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 BPNT1O95861 308 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 NTF4P34130 210 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 EIF4A3P38919 411 aaKnown RBP4.84□□□□□ -1.63
RIF1-212ENST00000498041 CDK8P49336 464 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 FANCCQ00597 558 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 FAM160A1Q05DH4 1040 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 BNC2Q6ZN30 1099 aaPredicted RBP4.84□□□□□ -1.63
RIF1-212ENST00000498041 CDC37L1Q7L3B6 337 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 ZAR1Q86SH2 424 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 GOLM1Q8NBJ4 401 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 ZNF507Q8TCN5 953 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 WNT10AQ9GZT5 417 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 C1GALT1Q9NS00 363 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 ATG3Q9NT62 314 aa4.84□□□□□ -1.63
RIF1-212ENST00000498041 FAM221AA4D161 298 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 F13A1P00488 732 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 F13BP05160 661 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 GARTP22102 1010 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 ADMP35318 185 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 ETF1P62495 437 aaKnown RBP4.83□□□□□ -1.64
RIF1-212ENST00000498041 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 DTX1Q86Y01 620 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 ABI1Q8IZP0 508 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 GATA6Q92908 595 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 KCNQ5Q9NR82 932 aa4.83□□□□□ -1.64
RIF1-212ENST00000498041 SUPT16HQ9Y5B9 1047 aaKnown RBP4.83□□□□□ -1.64
RIF1-212ENST00000498041 ROBO2Q9HCK4 1378 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 GREM1O60565 184 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 GRK4P32298 578 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 CYP27A1Q02318 531 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 PDE4BQ07343 736 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 CPSF6Q16630 551 aaKnown RBP eCLIP4.82□□□□□ -1.64
RIF1-212ENST00000498041 DUSP27Q5VZP5 1158 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 FBXL19Q6PCT2 694 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 OGFOD3Q6PK18 319 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 FAM196AQ6ZSG2 479 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 USP48Q86UV5 1035 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 TP53INP2Q8IXH6 220 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 ZNF296Q8WUU4 475 aaPredicted RBP4.82□□□□□ -1.64
RIF1-212ENST00000498041 METTL22Q9BUU2 404 aaPredicted RBP4.82□□□□□ -1.64
RIF1-212ENST00000498041 OSBPL1AQ9BXW6 950 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 ADGRE2Q9UHX3 823 aa4.82□□□□□ -1.64
RIF1-212ENST00000498041 FAM170BA6NMN3 283 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 CAP2P40123 477 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 RBM25P49756 843 aaKnown RBP4.81□□□□□ -1.64
RIF1-212ENST00000498041 CDK5R2Q13319 367 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 MPP2Q14168 576 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 CYP27C1Q4G0S4 372 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 OGFOD2Q6N063 350 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 UBE3DQ7Z6J8 389 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 HID1Q8IV36 788 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 SHISA5Q8N114 240 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 ZNF428Q96B54 188 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms