RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 SPATA31A1Q5TZJ5 1347 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 EPS15P42566 896 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 EXOSC10Q01780 885 aaKnown RBP9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 TNFAIP1Q13829 316 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 AKNAD1Q5T1N1 836 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 STOX1Q6ZVD7 989 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 MNS1Q8NEH6 495 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 CTCFLQ8NI51 663 aaPredicted RBP9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 CHRNDQ07001 517 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 UBE4AQ14139 1066 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 SMARCC2Q8TAQ2 1214 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 UPF1Q92900 1129 aaKnown RBP eCLIP9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 TAF6LQ9Y6J9 622 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 KDM3BQ7LBC6 1761 aa9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 PHRF1Q9P1Y6 1649 aaKnown RBP9.18□□□□□ -0.94
HLA-DMB-262ENST00000498020 PPEF1O14829 653 aaPredicted RBP9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 YEATS4O95619 227 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 CHGBP05060 677 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 TXLNAP40222 546 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 SCARF1Q14162 830 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 DNAJC25Q9H1X3 360 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 PIH1D3Q9NQM4 214 aaKnown RBP9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 SMC2O95347 1197 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 FMNL1O95466 1100 aaPredicted RBP9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 BCAMP50895 628 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 GADL1Q6ZQY3 521 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 USP28Q96RU2 1077 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 RCOR1Q9UKL0 485 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 MFSD14BQ5SR56 506 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 KRT26Q7Z3Y9 468 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 RTKN2Q8IZC4 609 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 FBXO18Q8NFZ0 1043 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 ARGLU1Q9NWB6 273 aaPredicted RBP9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 DACH1Q9UI36 760 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 WDR19Q8NEZ3 1342 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 MRC1P22897 1456 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 TSPY2A6NKD2 308 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 RXRAP19793 462 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 GSTO1P78417 241 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 PDE4BQ07343 736 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 ARMC9Q7Z3E5 817 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 RUFY1Q96T51 708 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 ACBD3Q9H3P7 528 aa9.17□□□□□ -0.94
HLA-DMB-262ENST00000498020 DPEP1P16444 411 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 TEX35Q5T0J7 233 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 MYSM1Q5VVJ2 828 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 ANO1Q5XXA6 986 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 GPHNQ9NQX3 736 aaPredicted RBP9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 CARMIL3Q8ND23 1372 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 RTL9Q8NET4 1388 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 ZMYM6O95789 1325 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 CCDC85CA6NKD9 419 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 ARID4AP29374 1257 aaPredicted RBP9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 SYKP43405 635 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 PPP2R5BQ15173 497 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 PDLIM2Q96JY6 352 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 TMEM106CQ9BVX2 250 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 CLIP2Q9UDT6 1046 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 SPATA31A5Q5VU36 1347 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 SPATA31A7Q8IWB4 1347 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 IFIT1BQ5T764 474 aaKnown RBP9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 MASTLQ96GX5 879 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 STRBPQ96SI9 672 aaKnown RBP9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 ZHX3Q9H4I2 956 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 CACNA1GO43497 2377 aa9.16□□□□□ -0.94
HLA-DMB-262ENST00000498020 NEMFO60524 1076 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CSPG5O95196 566 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CALM1P0DP23 149 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CALM2P0DP24 149 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CALM3P0DP25 149 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CTDSPL2Q05D32 466 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 RASGRF1Q13972 1273 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 KRT40Q6A162 431 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 ADALQ6DHV7 355 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 LUZP1Q86V48 1076 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 BCL9O00512 1426 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CBFA2T2O43439 604 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 NR1I2O75469 434 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 VEGFAP15692 232 aaPredicted RBP9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 ALX1Q15699 326 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 MB21D2Q8IYB1 491 aaPredicted RBP9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CPXCR1Q8N123 301 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CNNM3Q8NE01 707 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 HOOK2Q96ED9 719 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 TANGO6Q9C0B7 1094 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 RRAGCQ9HB90 399 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 ADD1P35611 737 aaKnown RBP9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 HUNKP57058 714 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 SP4Q02446 784 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 FILIP1Q7Z7B0 1213 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CDK5RAP3Q96JB5 506 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 CBX8Q9HC52 389 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 RTEL1Q9NZ71 1219 aa9.15□□□□□ -0.94
HLA-DMB-262ENST00000498020 MARCKSP29966 332 aaPredicted RBP9.15□□□□□ -0.95
HLA-DMB-262ENST00000498020 KIF5BP33176 963 aa9.15□□□□□ -0.95
HLA-DMB-262ENST00000498020 FILIP1LQ4L180 1135 aa9.15□□□□□ -0.95
HLA-DMB-262ENST00000498020 HSP90B2PQ58FF3 399 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms