RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, human

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC8-208	ENST00000497892	TCP10	Q12799	353 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	PRKG1	Q13976	671 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	VARS2	Q5ST30	1063 aa	Known RBP	13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	LDLRAD1	Q5T700	205 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	ANKRD45	Q5TZF3	282 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	TSHZ3	Q63HK5	1081 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	MAGEB6	Q8N7X4	407 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	EDC3	Q96F86	508 aa	Known RBP	13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	NOL10	Q9BSC4	688 aa	Known RBP	13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	ANGEL1	Q9UNK9	670 aa	Known RBP	13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	FZD1	Q9UP38	647 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	DDX60L	Q5H9U9	1706 aa	Known RBP	13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	ATRNL1	Q5VV63	1379 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	FAM155A	B1AL88	458 aa	Predicted RBP	13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	BAG3	O95817	575 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	SLC10A3	P09131	477 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	PDE6A	P16499	860 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	MX1	P20591	662 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	CYP7A1	P22680	504 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	ZNF157	P51786	506 aa	Predicted RBP	13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	GRM1	Q13255	1194 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	RASAL3	Q86YV0	1011 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	CCDC102A	Q96A19	550 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	HOOK2	Q96ED9	719 aa		13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	DDX4	Q9NQI0	724 aa	Known RBP	13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
ERCC8-208	ENST00000497892	SIPA1L1	O43166	1804 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	UNCX	A6NJT0	531 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	USP2	O75604	605 aa	Predicted RBP	13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	IREB2	P48200	963 aa	Known RBP	13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	NOG	Q13253	232 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	ARSI	Q5FYB1	569 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	SLC9C2	Q5TAH2	1124 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	CERS3	Q8IU89	383 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	ZFPM1	Q8IX07	1006 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	TEX11	Q8IYF3	940 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	PI4K2B	Q8TCG2	481 aa		13.63	□□□□□ -0.23
ERCC8-208	ENST00000497892	NAV1	Q8NEY1	1877 aa		13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	TCRBV5S4A2T	A0A5A2	114 aa		13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	ERC2	O15083	957 aa		13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	MAP2K2	P36507	400 aa		13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	PICALM	Q13492	652 aa		13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	DCAF15	Q66K64	600 aa		13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	SH3BP5L	Q7L8J4	393 aa		13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	ZNF532	Q9HCE3	1301 aa		13.62	□□□□□ -0.23
ERCC8-208	ENST00000497892	AOC2	O75106	756 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	GLRX3	O76003	335 aa	Known RBP	13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	ADD2	P35612	726 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	DYNLL1	P63167	89 aa	Known RBP	13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	NUCB1	Q02818	461 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	B4GALNT3	Q6L9W6	998 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	CHD1L	Q86WJ1	897 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	ANKRD13A	Q8IZ07	590 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	MIGA1	Q8NAN2	632 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	CLMN	Q96JQ2	1002 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	CSRNP1	Q96S65	589 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	RIOK1	Q9BRS2	568 aa	Known RBP	13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	LNPK	Q9C0E8	428 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	STAP2	Q9UGK3	403 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	FLT1	P17948	1338 aa		13.61	□□□□□ -0.23
ERCC8-208	ENST00000497892	MYH1	P12882	1939 aa		13.6	□□□□□ -0.23
ERCC8-208	ENST00000497892	DDTL	A6NHG4	134 aa	Predicted RBP	13.6	□□□□□ -0.23
ERCC8-208	ENST00000497892	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.6	□□□□□ -0.23
ERCC8-208	ENST00000497892	KBTBD3	Q8NAB2	608 aa		13.6	□□□□□ -0.23
ERCC8-208	ENST00000497892	ZNF341	Q9BYN7	854 aa		13.6	□□□□□ -0.23
ERCC8-208	ENST00000497892	DOCK1	Q14185	1865 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	MAGEB6P1	A0A0J9YX57	407 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	PDE1A	P54750	535 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	MAP2K1	Q02750	393 aa	Predicted RBP	13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	VGLL4	Q14135	290 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	UBE3C	Q15386	1083 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	ZSCAN25	Q6NSZ9	544 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	MIGA2	Q7L4E1	593 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	TMC2	Q8TDI7	906 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	TGFBRAP1	Q8WUH2	860 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	WRNIP1	Q96S55	665 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	ZIC5	Q96T25	663 aa		13.59	□□□□□ -0.23
ERCC8-208	ENST00000497892	HSPA1A	P0DMV8	641 aa	Known RBP	13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	HSPA1B	P0DMV9	641 aa	Known RBP	13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	ZBTB48	P10074	688 aa	Predicted RBP	13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	MAP3K9	P80192	1104 aa		13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	KIF23	Q02241	960 aa	Predicted RBP	13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	MAP3K10	Q02779	954 aa		13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	SPRYD7	Q5W111	196 aa		13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	MAPKAPK5	Q8IW41	473 aa		13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	SLC10A4	Q96EP9	437 aa		13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	DHX36	Q9H2U1	1008 aa	Known RBP	13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	WBP1L	Q9NX94	342 aa		13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	ZNF112	Q9UJU3	913 aa		13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	CSAD	Q9Y600	493 aa		13.58	□□□□□ -0.24
ERCC8-208	ENST00000497892	ATAD5	Q96QE3	1844 aa		13.57	□□□□□ -0.24
ERCC8-208	ENST00000497892	CHGB	P05060	677 aa		13.57	□□□□□ -0.24
ERCC8-208	ENST00000497892	SLFNL1	Q499Z3	407 aa		13.57	□□□□□ -0.24
ERCC8-208	ENST00000497892	LCORL	Q8N3X6	602 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms