RNA–Protein interactions for RNA: ENST00000496703.1

ITGB5-210, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-210ENST00000496703 HDAC1Q13547 482 aaPredicted RBP19.6■□□□□ 0.73
ITGB5-210ENST00000496703 SLC4A8Q2Y0W8 1093 aa19.6■□□□□ 0.73
ITGB5-210ENST00000496703 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
ITGB5-210ENST00000496703 SCYL3Q8IZE3 742 aa19.6■□□□□ 0.73
ITGB5-210ENST00000496703 ZNF296Q8WUU4 475 aaPredicted RBP19.6■□□□□ 0.73
ITGB5-210ENST00000496703 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.6■□□□□ 0.733e-16■■■■□ 23.4
ITGB5-210ENST00000496703 MYH8P13535 1937 aa19.6■□□□□ 0.73
ITGB5-210ENST00000496703 ALDH1A1P00352 501 aa19.59■□□□□ 0.73
ITGB5-210ENST00000496703 PTPRAP18433 802 aa19.59■□□□□ 0.73
ITGB5-210ENST00000496703 ADD2P35612 726 aa19.59■□□□□ 0.73
ITGB5-210ENST00000496703 CRHR2Q13324 411 aa19.59■□□□□ 0.73
ITGB5-210ENST00000496703 MOGSQ13724 837 aa19.59■□□□□ 0.73
ITGB5-210ENST00000496703 TMED8Q6PL24 325 aaPredicted RBP19.59■□□□□ 0.73
ITGB5-210ENST00000496703 KCNH4Q9UQ05 1017 aa19.59■□□□□ 0.73
ITGB5-210ENST00000496703 ZSWIM8A7E2V4 1837 aa19.58■□□□□ 0.73
ITGB5-210ENST00000496703 MAGEB6P1A0A0J9YX57 407 aa19.58■□□□□ 0.72
ITGB5-210ENST00000496703 CTNND1O60716 968 aaKnown RBP19.58■□□□□ 0.72
ITGB5-210ENST00000496703 SNAPC2Q13487 334 aa19.58■□□□□ 0.72
ITGB5-210ENST00000496703 METTL16Q86W50 562 aaKnown RBP19.58■□□□□ 0.72
ITGB5-210ENST00000496703 LCORLQ8N3X6 602 aa19.58■□□□□ 0.72
ITGB5-210ENST00000496703 DHX36Q9H2U1 1008 aaKnown RBP19.58■□□□□ 0.72
ITGB5-210ENST00000496703 PI4KBQ9UBF8 816 aa19.58■□□□□ 0.72
ITGB5-210ENST00000496703 SALL3Q9BXA9 1300 aa19.57■□□□□ 0.72
ITGB5-210ENST00000496703 BTBD19C9JJ37 291 aa19.57■□□□□ 0.72
ITGB5-210ENST00000496703 CETPP11597 493 aa19.57■□□□□ 0.72
ITGB5-210ENST00000496703 JAG1P78504 1218 aa19.57■□□□□ 0.72
ITGB5-210ENST00000496703 EVX2Q03828 476 aa19.57■□□□□ 0.72
ITGB5-210ENST00000496703 SHROOM1Q2M3G4 852 aaPredicted RBP19.57■□□□□ 0.72
ITGB5-210ENST00000496703 MCOLN1Q9GZU1 580 aa19.57■□□□□ 0.72
ITGB5-210ENST00000496703 ZHX2Q9Y6X8 837 aa19.57■□□□□ 0.72
ITGB5-210ENST00000496703 USP5P45974 858 aa19.56■□□□□ 0.72
ITGB5-210ENST00000496703 DGKZQ13574 1117 aa19.56■□□□□ 0.72
ITGB5-210ENST00000496703 NOM1Q5C9Z4 860 aaKnown RBP19.56■□□□□ 0.72
ITGB5-210ENST00000496703 PI4K2BQ8TCG2 481 aa19.56■□□□□ 0.72
ITGB5-210ENST00000496703 ARMT1Q9H993 441 aa19.56■□□□□ 0.72
ITGB5-210ENST00000496703 HERC5Q9UII4 1024 aaKnown RBP19.56■□□□□ 0.72
ITGB5-210ENST00000496703 AFG3L2Q9Y4W6 797 aa19.56■□□□□ 0.72
ITGB5-210ENST00000496703 CAPN15O75808 1086 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 IGHDP01880 384 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
ITGB5-210ENST00000496703 CAP1Q01518 475 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 ANKRD45Q5TZF3 282 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 OTUD7BQ6GQQ9 843 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 CERS3Q8IU89 383 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 DOCK3Q8IZD9 2030 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 SDR42E1Q8WUS8 393 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 ABHD8Q96I13 439 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 PICK1Q9NRD5 415 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 LOC285556D6RIA3 1793 aa19.55■□□□□ 0.72
ITGB5-210ENST00000496703 PRKAB2O43741 272 aa19.54■□□□□ 0.72
ITGB5-210ENST00000496703 CAP2P40123 477 aa19.54■□□□□ 0.72
ITGB5-210ENST00000496703 AAMPQ13685 434 aa19.54■□□□□ 0.72
ITGB5-210ENST00000496703 UBE3CQ15386 1083 aa19.54■□□□□ 0.72
ITGB5-210ENST00000496703 TAF1CQ15572 869 aaPredicted RBP19.54■□□□□ 0.72
ITGB5-210ENST00000496703 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
ITGB5-210ENST00000496703 GCC1Q96CN9 775 aa19.54■□□□□ 0.72
ITGB5-210ENST00000496703 PUS7LQ9H0K6 701 aaKnown RBP19.54■□□□□ 0.72
ITGB5-210ENST00000496703 TTC41PQ6P2S7 1318 aa19.53■□□□□ 0.72
ITGB5-210ENST00000496703 FKTNO75072 461 aa19.53■□□□□ 0.72
ITGB5-210ENST00000496703 MBD4O95243 580 aa19.53■□□□□ 0.72
ITGB5-210ENST00000496703 PLCD1P51178 756 aa19.53■□□□□ 0.72
ITGB5-210ENST00000496703 GPAT2Q6NUI2 795 aa19.53■□□□□ 0.72
ITGB5-210ENST00000496703 GPATCH3Q96I76 525 aa19.53■□□□□ 0.72
ITGB5-210ENST00000496703 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.53■□□□□ 0.72
ITGB5-210ENST00000496703 BRCA2P51587 3418 aa19.53■□□□□ 0.72
ITGB5-210ENST00000496703 A0A0G2JLL6 359 aaPredicted RBP19.52■□□□□ 0.72
ITGB5-210ENST00000496703 CXCL11O14625 94 aa19.52■□□□□ 0.72
ITGB5-210ENST00000496703 MX1P20591 662 aa19.52■□□□□ 0.72
ITGB5-210ENST00000496703 PRRT2Q7Z6L0 340 aaPredicted RBP19.52■□□□□ 0.72
ITGB5-210ENST00000496703 CTU1Q7Z7A3 348 aaKnown RBP19.52■□□□□ 0.72
ITGB5-210ENST00000496703 KBTBD3Q8NAB2 608 aa19.52■□□□□ 0.72
ITGB5-210ENST00000496703 CRNKL1Q9BZJ0 848 aaKnown RBP19.52■□□□□ 0.72
ITGB5-210ENST00000496703 DCP1AQ9NPI6 582 aaPredicted RBP19.52■□□□□ 0.72
ITGB5-210ENST00000496703 MGAMO43451 1857 aa19.52■□□□□ 0.71
ITGB5-210ENST00000496703 TRIM75PA6NK02 468 aa19.51■□□□□ 0.71
ITGB5-210ENST00000496703 SMIM22K7EJ46 135 aa19.51■□□□□ 0.71
ITGB5-210ENST00000496703 GDF11O95390 407 aa19.51■□□□□ 0.71
ITGB5-210ENST00000496703 HLA-DOAP06340 250 aa19.51■□□□□ 0.71
ITGB5-210ENST00000496703 ANKRD23Q86SG2 305 aa19.51■□□□□ 0.71
ITGB5-210ENST00000496703 SMC5Q8IY18 1101 aa19.51■□□□□ 0.71
ITGB5-210ENST00000496703 CRACR2BQ8N4Y2 399 aaPredicted RBP19.51■□□□□ 0.71
ITGB5-210ENST00000496703 KIAA0100Q14667 2235 aaKnown RBP19.51■□□□□ 0.71
ITGB5-210ENST00000496703 PDHXO00330 501 aa19.5■□□□□ 0.71
ITGB5-210ENST00000496703 CYP2D6P10635 497 aa19.5■□□□□ 0.71
ITGB5-210ENST00000496703 EHD4Q9H223 541 aa19.5■□□□□ 0.71
ITGB5-210ENST00000496703 ZFYVE28Q9HCC9 887 aa19.5■□□□□ 0.71
ITGB5-210ENST00000496703 ZCCHC17Q9NP64 241 aaKnown RBP19.5■□□□□ 0.71
ITGB5-210ENST00000496703 MCM9Q9NXL9 1143 aa19.5■□□□□ 0.71
ITGB5-210ENST00000496703 SERPINB13Q9UIV8 391 aa19.5■□□□□ 0.71
ITGB5-210ENST00000496703 SPP2Q13103 211 aa19.49■□□□□ 0.71
ITGB5-210ENST00000496703 B4GALNT3Q6L9W6 998 aa19.49■□□□□ 0.71
ITGB5-210ENST00000496703 TATDN1Q6P1N9 297 aa19.49■□□□□ 0.71
ITGB5-210ENST00000496703 OSBP2Q969R2 916 aa19.49■□□□□ 0.71
ITGB5-210ENST00000496703 LNPKQ9C0E8 428 aa19.49■□□□□ 0.71
ITGB5-210ENST00000496703 RWDD1Q9H446 243 aaPredicted RBP19.49■□□□□ 0.71
ITGB5-210ENST00000496703 ADGRA2Q96PE1 1338 aa19.49■□□□□ 0.71
ITGB5-210ENST00000496703 ERC2O15083 957 aa19.48■□□□□ 0.71
ITGB5-210ENST00000496703 RNF113AO15541 343 aaKnown RBP19.48■□□□□ 0.71
ITGB5-210ENST00000496703 TLR2O60603 784 aa19.48■□□□□ 0.71
ITGB5-210ENST00000496703 GLRX3O76003 335 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms