RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 TBC1D22AQ8WUA7 517 aa16.58■□□□□ 0.24
TFE3-205ENST00000495940 FAM151AQ8WW52 585 aa16.58■□□□□ 0.24
TFE3-205ENST00000495940 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
TFE3-205ENST00000495940 ATRNL1Q5VV63 1379 aa16.57■□□□□ 0.24
TFE3-205ENST00000495940 CXCL11O14625 94 aa16.57■□□□□ 0.24
TFE3-205ENST00000495940 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
TFE3-205ENST00000495940 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
TFE3-205ENST00000495940 MUC3AQ02505 3323 aa16.57■□□□□ 0.24
TFE3-205ENST00000495940 LTBP2Q14767 1821 aa16.56■□□□□ 0.24
TFE3-205ENST00000495940 MAST3O60307 1309 aa16.56■□□□□ 0.24
TFE3-205ENST00000495940 HMGCRP04035 888 aa16.56■□□□□ 0.24
TFE3-205ENST00000495940 SLURP2P0DP57 97 aa16.56■□□□□ 0.24
TFE3-205ENST00000495940 COA7Q96BR5 231 aa16.56■□□□□ 0.24
TFE3-205ENST00000495940 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
TFE3-205ENST00000495940 ATAD5Q96QE3 1844 aa16.56■□□□□ 0.24
TFE3-205ENST00000495940 POTEB2H3BUK9 544 aa16.55■□□□□ 0.24
TFE3-205ENST00000495940 NUCB1Q02818 461 aa16.55■□□□□ 0.24
TFE3-205ENST00000495940 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
TFE3-205ENST00000495940 HHIPL2Q6UWX4 724 aa16.55■□□□□ 0.24
TFE3-205ENST00000495940 FASTKD5Q7L8L6 764 aaKnown RBP16.55■□□□□ 0.24
TFE3-205ENST00000495940 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
TFE3-205ENST00000495940 ZFPM1Q8IX07 1006 aa16.55■□□□□ 0.24
TFE3-205ENST00000495940 FAM198AQ9UFP1 575 aa16.55■□□□□ 0.24
TFE3-205ENST00000495940 DAGLAQ9Y4D2 1042 aa16.55■□□□□ 0.24
TFE3-205ENST00000495940 VAMP4O75379 141 aa16.54■□□□□ 0.24
TFE3-205ENST00000495940 PTPRAP18433 802 aa16.54■□□□□ 0.24
TFE3-205ENST00000495940 DIXDC1Q155Q3 683 aa16.54■□□□□ 0.24
TFE3-205ENST00000495940 CDC42EP5Q6NZY7 148 aa16.54■□□□□ 0.24
TFE3-205ENST00000495940 SCYL3Q8IZE3 742 aa16.54■□□□□ 0.24
TFE3-205ENST00000495940 TMEM57Q8N5G2 664 aa16.54■□□□□ 0.24
TFE3-205ENST00000495940 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 GRM8O00222 908 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 LRRC24Q50LG9 513 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 MRPL50Q8N5N7 158 aaKnown RBP16.53■□□□□ 0.24
TFE3-205ENST00000495940 MRIQ9BWK5 157 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 HMX1Q9NP08 348 aaPredicted RBP16.53■□□□□ 0.24
TFE3-205ENST00000495940 OGDHLQ9ULD0 1010 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 SLC45A1Q9Y2W3 748 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 AFG3L2Q9Y4W6 797 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 MYH2Q9UKX2 1941 aa16.53■□□□□ 0.24
TFE3-205ENST00000495940 MROH5Q6ZUA9 1318 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 TRIM75PA6NK02 468 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 FAM110CQ1W6H9 321 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 LRRC26Q2I0M4 334 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 CAVIN4Q5BKX8 364 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 BMP2KLQ5H9B9 411 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 FAM109BQ6ICB4 259 aaPredicted RBP16.52■□□□□ 0.24
TFE3-205ENST00000495940 TRIB2Q92519 343 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 SUCLG2Q96I99 432 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 PICK1Q9NRD5 415 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 RAPGEFL1Q9UHV5 662 aa16.52■□□□□ 0.24
TFE3-205ENST00000495940 PTMSP20962 102 aa16.51■□□□□ 0.23
TFE3-205ENST00000495940 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
TFE3-205ENST00000495940 ZNF697Q5TEC3 545 aa16.51■□□□□ 0.23
TFE3-205ENST00000495940 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
TFE3-205ENST00000495940 MAFAQ8NHW3 353 aaPredicted RBP16.51■□□□□ 0.23
TFE3-205ENST00000495940 KAZALD1Q96I82 304 aa16.51■□□□□ 0.23
TFE3-205ENST00000495940 AGTPBP1Q9UPW5 1226 aa16.51■□□□□ 0.23
TFE3-205ENST00000495940 SUGT1Q9Y2Z0 365 aa16.51■□□□□ 0.23
TFE3-205ENST00000495940 COL9A1P20849 921 aa16.5■□□□□ 0.23
TFE3-205ENST00000495940 SNX21Q969T3 373 aa16.5■□□□□ 0.23
TFE3-205ENST00000495940 C22orf23Q9BZE7 217 aa16.5■□□□□ 0.23
TFE3-205ENST00000495940 RFX7Q2KHR2 1363 aa16.5■□□□□ 0.23
TFE3-205ENST00000495940 COL6A1P12109 1028 aa16.49■□□□□ 0.23
TFE3-205ENST00000495940 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
TFE3-205ENST00000495940 PRDX5P30044 214 aa16.49■□□□□ 0.23
TFE3-205ENST00000495940 RBM25P49756 843 aaKnown RBP16.49■□□□□ 0.23
TFE3-205ENST00000495940 CHD1LQ86WJ1 897 aa16.49■□□□□ 0.23
TFE3-205ENST00000495940 CDX2Q99626 313 aaPredicted RBP16.49■□□□□ 0.23
TFE3-205ENST00000495940 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
TFE3-205ENST00000495940 MAP3K21Q5TCX8 1036 aa16.48■□□□□ 0.23
TFE3-205ENST00000495940 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
TFE3-205ENST00000495940 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
TFE3-205ENST00000495940 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
TFE3-205ENST00000495940 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
TFE3-205ENST00000495940 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
TFE3-205ENST00000495940 TNNQ9UQP3 1299 aa16.48■□□□□ 0.23
TFE3-205ENST00000495940 PTPRCP08575 1304 aa16.47■□□□□ 0.23
TFE3-205ENST00000495940 PDE8BO95263 885 aa16.47■□□□□ 0.23
TFE3-205ENST00000495940 KLHDC4Q8TBB5 520 aa16.47■□□□□ 0.23
TFE3-205ENST00000495940 MYLIPQ8WY64 445 aa16.47■□□□□ 0.23
TFE3-205ENST00000495940 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
TFE3-205ENST00000495940 TTC28Q96AY4 2481 aa16.47■□□□□ 0.23
TFE3-205ENST00000495940 PEX10O60683 326 aa16.46■□□□□ 0.23
TFE3-205ENST00000495940 SEC24BO95487 1268 aa16.46■□□□□ 0.23
TFE3-205ENST00000495940 CYP2B6P20813 491 aa16.46■□□□□ 0.23
TFE3-205ENST00000495940 CHMP5Q9NZZ3 219 aa16.46■□□□□ 0.23
TFE3-205ENST00000495940 PNMA3Q9UL41 463 aa16.46■□□□□ 0.23
TFE3-205ENST00000495940 LRRFIP2Q9Y608 721 aaKnown RBP16.46■□□□□ 0.23
TFE3-205ENST00000495940 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
TFE3-205ENST00000495940 FAM196BA6NMK8 535 aa16.45■□□□□ 0.22
TFE3-205ENST00000495940 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
TFE3-205ENST00000495940 L1TD1Q5T7N2 865 aaKnown RBP16.45■□□□□ 0.22
TFE3-205ENST00000495940 HSCBQ8IWL3 235 aa16.45■□□□□ 0.22
TFE3-205ENST00000495940 ZSCAN29Q8IWY8 852 aaPredicted RBP16.45■□□□□ 0.22
TFE3-205ENST00000495940 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
TFE3-205ENST00000495940 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
TFE3-205ENST00000495940 ISY1Q9ULR0 285 aaKnown RBP16.45■□□□□ 0.22
TFE3-205ENST00000495940 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms