RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 STX17P56962 302 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TRAF1Q13077 416 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TRIM14Q14142 442 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 SLC9A5Q14940 896 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 PLEKHO1Q53GL0 409 aaPredicted RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 NUTM2DQ5VT03 806 aaPredicted RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 SLF2Q8IX21 1173 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 KCNG4Q8TDN1 519 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 L3MBTL2Q969R5 705 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TFIP11Q9UBB9 837 aaKnown RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 ZNF229Q9UJW7 825 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 KIF11P52732 1056 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 KMT5BQ4FZB7 885 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 GIMAP6Q6P9H5 292 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 ADCK1Q86TW2 530 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 ARHGAP18Q8N392 663 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 POMGNT1Q8WZA1 660 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TEX12Q9BXU0 123 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 FMN1Q68DA7 1419 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 MTRF1O75570 445 aaKnown RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 MAP3K10Q02779 954 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TRMT1LQ7Z2T5 733 aaKnown RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 SCYL1Q96KG9 808 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 FGD4Q96M96 766 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 IFT122Q9HBG6 1241 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 UBAP1Q9NZ09 502 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 SNX5Q9Y5X3 404 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 AKR1B15C9JRZ8 316 aaPredicted RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 TRAF7Q6Q0C0 670 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 PLEKHM3Q6ZWE6 761 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 FBXL13Q8NEE6 735 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 ZKSCAN3Q9BRR0 538 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 CAPS2Q9BXY5 557 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 NLRP2Q9NX02 1062 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 ST20-MTHFSA0A0A6YYL1 179 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 FLOT1O75955 427 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 TRHP20396 242 aaPredicted RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 WDR44Q5JSH3 913 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 PROCA1Q8NCQ7 364 aaPredicted RBP5.72□□□□□ -1.49
NF1-216ENST00000495910 GIPC2Q8TF65 315 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 MIS12Q9H081 205 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 RAB17Q9H0T7 212 aa5.72□□□□□ -1.49
NF1-216ENST00000495910 SYCE1LA8MT33 242 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 DEAF1O75398 565 aaPredicted RBP5.71□□□□□ -1.49
NF1-216ENST00000495910 KRT5P13647 590 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 MX1P20591 662 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 LMNB1P20700 586 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 TMED10P49755 219 aaKnown RBP5.71□□□□□ -1.49
NF1-216ENST00000495910 TMTC3Q6ZXV5 915 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 HS2ST1Q7LGA3 356 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 NOX5Q96PH1 765 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 COQ7Q99807 217 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 SYTL2Q9HCH5 934 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 CHCHD3Q9NX63 227 aaKnown RBP5.71□□□□□ -1.49
NF1-216ENST00000495910 SLC4A7Q9Y6M7 1214 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 NCAPD3P42695 1498 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 GOLGA8RI6L899 631 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 SUN1O94901 812 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 C4BPBP20851 252 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 GARSP41250 739 aaKnown RBP5.71□□□□□ -1.49
NF1-216ENST00000495910 ST13P50502 369 aaKnown RBP5.71□□□□□ -1.49
NF1-216ENST00000495910 CCDC85BQ15834 202 aaPredicted RBP5.71□□□□□ -1.49
NF1-216ENST00000495910 CAVIN4Q5BKX8 364 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 RPAP2Q8IXW5 612 aaPredicted RBP5.71□□□□□ -1.49
NF1-216ENST00000495910 MRPS27Q92552 414 aaKnown RBP5.71□□□□□ -1.49
NF1-216ENST00000495910 SH3GL1Q99961 368 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 ATAD2BQ9ULI0 1458 aa5.71□□□□□ -1.49
NF1-216ENST00000495910 GLRX3O76003 335 aaKnown RBP5.71□□□□□ -1.5
NF1-216ENST00000495910 SF3A3Q12874 501 aaKnown RBP eCLIP5.71□□□□□ -1.54e-6■■■■□ 22.2
NF1-216ENST00000495910 PPP4R4Q6NUP7 873 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 SND1Q7KZF4 910 aaKnown RBP eCLIP5.71□□□□□ -1.5
NF1-216ENST00000495910 TRMT10CQ7L0Y3 403 aaKnown RBP5.71□□□□□ -1.5
NF1-216ENST00000495910 FAM212AQ96EL1 285 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 GDAP1L1Q96MZ0 367 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 KAT14Q9H8E8 782 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 WARS2Q9UGM6 360 aaKnown RBP5.71□□□□□ -1.5
NF1-216ENST00000495910 AMOTL2Q9Y2J4 779 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 EIF3DO15371 548 aaKnown RBP eCLIP5.71□□□□□ -1.5
NF1-216ENST00000495910 SLC4A2P04920 1241 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 OCM2P0CE71 109 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 OCMP0CE72 109 aaPredicted RBP5.71□□□□□ -1.5
NF1-216ENST00000495910 HARSP12081 509 aaKnown RBP5.71□□□□□ -1.5
NF1-216ENST00000495910 RWDD2BP57060 319 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 E2F5Q15329 346 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 ATG16L1Q676U5 607 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 CEP85Q6P2H3 762 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 LUZP2Q86TE4 346 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 SYCE1Q8N0S2 351 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 HOOK2Q96ED9 719 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 KRT12Q99456 494 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 TRIM31Q9BZY9 425 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 SLC13A4Q9UKG4 626 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 CADPSQ9ULU8 1353 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 S100A9P06702 114 aaKnown RBP5.71□□□□□ -1.5
NF1-216ENST00000495910 GRK2P25098 689 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 KRT2P35908 639 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 RAPGEF1Q13905 1077 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 FAM133BQ5BKY9 247 aaKnown RBP5.71□□□□□ -1.5
NF1-216ENST00000495910 LRRC8CQ8TDW0 803 aa5.71□□□□□ -1.5
NF1-216ENST00000495910 ABCF2Q9UG63 623 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms