RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 FBXL16Q8N461 479 aa17.31■□□□□ 0.36
CHPF2-204ENST00000495645 PGBD1Q96JS3 809 aa17.31■□□□□ 0.36
CHPF2-204ENST00000495645 UBAC1Q9BSL1 405 aa17.31■□□□□ 0.36
CHPF2-204ENST00000495645 RTFDC1Q9BY42 306 aaPredicted RBP17.31■□□□□ 0.36
CHPF2-204ENST00000495645 CACNB3P54284 484 aa17.3■□□□□ 0.36
CHPF2-204ENST00000495645 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
CHPF2-204ENST00000495645 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHPF2-204ENST00000495645 C8orf76Q96K31 380 aa17.3■□□□□ 0.36
CHPF2-204ENST00000495645 KRT23Q9C075 422 aa17.3■□□□□ 0.36
CHPF2-204ENST00000495645 KRT85P78386 507 aa17.3■□□□□ 0.36
CHPF2-204ENST00000495645 MASTLQ96GX5 879 aa17.3■□□□□ 0.36
CHPF2-204ENST00000495645 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
CHPF2-204ENST00000495645 SPATA32Q96LK8 384 aa17.3■□□□□ 0.36
CHPF2-204ENST00000495645 CHD4Q14839 1912 aa17.3■□□□□ 0.36
CHPF2-204ENST00000495645 ZMYM6O95789 1325 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 USP17L3A6NCW0 530 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 USP17L4A6NCW7 530 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 VEGFAP15692 232 aaPredicted RBP17.29■□□□□ 0.36
CHPF2-204ENST00000495645 PDE6BP35913 854 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 GIMAP6Q6P9H5 292 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 USP17L1Q7RTZ2 530 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 ZNF830Q96NB3 372 aaPredicted RBP17.29■□□□□ 0.36
CHPF2-204ENST00000495645 STK32BQ9NY57 414 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 KCNJ14Q9UNX9 436 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 ATP6V1DQ9Y5K8 247 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 HMGN5P82970 282 aaKnown RBP17.29■□□□□ 0.36
CHPF2-204ENST00000495645 PDLIM2Q96JY6 352 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 CNNM2Q9H8M5 875 aa17.29■□□□□ 0.36
CHPF2-204ENST00000495645 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
CHPF2-204ENST00000495645 C21orf2O43822 256 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 SEC23AQ15436 765 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 SGMS1Q86VZ5 419 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 ZNF654Q8IZM8 581 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 ESR2Q92731 530 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 PLEKHA8P1O95397 391 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 KIAA0825Q8IV33 1275 aa17.28■□□□□ 0.36
CHPF2-204ENST00000495645 A0A087WWV3 80 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 H0YIN7 160 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 SPTY2D1Q68D10 685 aaPredicted RBP17.27■□□□□ 0.36
CHPF2-204ENST00000495645 FBXO18Q8NFZ0 1043 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 ZSCAN10Q96SZ4 725 aaPredicted RBP17.27■□□□□ 0.36
CHPF2-204ENST00000495645 MYH2Q9UKX2 1941 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 G3V3G9 751 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 UBE2HP62256 183 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 DCAF8Q5TAQ9 597 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 CLEC10AQ8IUN9 316 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 ERCC4Q92889 916 aaPredicted RBP17.27■□□□□ 0.36
CHPF2-204ENST00000495645 SHISA4Q96DD7 197 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 ANAPC4Q9UJX5 808 aa17.27■□□□□ 0.36
CHPF2-204ENST00000495645 ERICH2A1L162 156 aa17.27■□□□□ 0.35
CHPF2-204ENST00000495645 LIFRP42702 1097 aa17.27■□□□□ 0.35
CHPF2-204ENST00000495645 AOC3Q16853 763 aa17.27■□□□□ 0.35
CHPF2-204ENST00000495645 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.35
CHPF2-204ENST00000495645 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.35
CHPF2-204ENST00000495645 CPVLQ9H3G5 476 aa17.27■□□□□ 0.35
CHPF2-204ENST00000495645 TTF2Q9UNY4 1162 aaKnown RBP17.27■□□□□ 0.35
CHPF2-204ENST00000495645 CLIC4Q9Y696 253 aa17.27■□□□□ 0.35
CHPF2-204ENST00000495645 PDS5AQ29RF7 1337 aaKnown RBP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 TSPY2A6NKD2 308 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 IARSP41252 1262 aaKnown RBP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 RHBDL3P58872 404 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 TEX11Q8IYF3 940 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 IL17RBQ9NRM6 502 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 PPP1R1BQ9UD71 204 aaPredicted RBP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 DAGLAQ9Y4D2 1042 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 DUOX1Q9NRD9 1551 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 ALDH1B1P30837 517 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 TFAP4Q01664 338 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 IFIT1BQ5T764 474 aaKnown RBP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 C12orf60Q5U649 245 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 FANCBQ8NB91 859 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 ATP8A2Q9NTI2 1148 aa17.26■□□□□ 0.35
CHPF2-204ENST00000495645 NOL7Q9UMY1 257 aaKnown RBP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
CHPF2-204ENST00000495645 OFD1O75665 1012 aa17.25■□□□□ 0.35
CHPF2-204ENST00000495645 MBD3O95983 291 aa17.25■□□□□ 0.35
CHPF2-204ENST00000495645 RTN1Q16799 776 aa17.25■□□□□ 0.35
CHPF2-204ENST00000495645 KRT40Q6A162 431 aa17.25■□□□□ 0.35
CHPF2-204ENST00000495645 C17orf53Q8N3J3 647 aaPredicted RBP17.25■□□□□ 0.35
CHPF2-204ENST00000495645 TSPY26PQ9H489 355 aa17.25■□□□□ 0.35
CHPF2-204ENST00000495645 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
CHPF2-204ENST00000495645 COL11A2P13942 1736 aaPredicted RBP17.25■□□□□ 0.35
CHPF2-204ENST00000495645 DHX16O60231 1041 aaKnown RBP17.25■□□□□ 0.35
CHPF2-204ENST00000495645 NR1I2O75469 434 aa17.25■□□□□ 0.35
CHPF2-204ENST00000495645 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
CHPF2-204ENST00000495645 PLCB2Q00722 1185 aa17.25■□□□□ 0.35
CHPF2-204ENST00000495645 SART3Q15020 963 aaKnown RBP17.25■□□□□ 0.35
CHPF2-204ENST00000495645 CKAP2LQ8IYA6 745 aa17.25■□□□□ 0.35
CHPF2-204ENST00000495645 WDR19Q8NEZ3 1342 aa17.24■□□□□ 0.35
CHPF2-204ENST00000495645 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
CHPF2-204ENST00000495645 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
CHPF2-204ENST00000495645 ZFPM1Q8IX07 1006 aa17.24■□□□□ 0.35
CHPF2-204ENST00000495645 DACT1Q9NYF0 836 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms