RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
HDAC3-214ENST00000495485 STOX1Q6ZVD7 989 aa12.03□□□□□ -0.48
HDAC3-214ENST00000495485 CDC37L1Q7L3B6 337 aa12.03□□□□□ -0.48
HDAC3-214ENST00000495485 APOBEC3FQ8IUX4 373 aaKnown RBP12.03□□□□□ -0.48
HDAC3-214ENST00000495485 LCORLQ8N3X6 602 aa12.03□□□□□ -0.48
HDAC3-214ENST00000495485 CERS5Q8N5B7 392 aa12.03□□□□□ -0.48
HDAC3-214ENST00000495485 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
HDAC3-214ENST00000495485 DCPSQ96C86 337 aaKnown RBP12.03□□□□□ -0.48
HDAC3-214ENST00000495485 ZBED3Q96IU2 234 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-214ENST00000495485 ZDHHC15Q96MV8 337 aa12.03□□□□□ -0.48
HDAC3-214ENST00000495485 ANAPC4Q9UJX5 808 aa12.03□□□□□ -0.48
HDAC3-214ENST00000495485 NAP1L2Q9ULW6 460 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-214ENST00000495485 PPP2R3BQ9Y5P8 575 aa12.03□□□□□ -0.48
HDAC3-214ENST00000495485 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 FOXP2O15409 715 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 CDKL5O76039 1030 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 ZSCAN22P10073 491 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-214ENST00000495485 MB21D2Q8IYB1 491 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-214ENST00000495485 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 RGS22Q8NE09 1264 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 ESR2Q92731 530 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 TCEANC2Q96MN5 208 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 ZNF287Q9HBT7 754 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 ARPP21Q9UBL0 812 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-214ENST00000495485 ANGEL1Q9UNK9 670 aaKnown RBP12.02□□□□□ -0.49
HDAC3-214ENST00000495485 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
HDAC3-214ENST00000495485 WNT10BO00744 389 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 CPLX1O14810 134 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 TRAK2O60296 914 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 SYT1P21579 422 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 LIFRP42702 1097 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 CRKP46108 304 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 PDE4BQ07343 736 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 PPARAQ07869 468 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 STK3Q13188 491 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 CFAP100Q494V2 611 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 TBC1D10BQ4KMP7 808 aaPredicted RBP12.01□□□□□ -0.49
HDAC3-214ENST00000495485 CCDC178Q5BJE1 867 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 MCTP1Q6DN14 999 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 NFXL1Q6ZNB6 911 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 SULF1Q8IWU6 871 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 RIOK1Q9BRS2 568 aaKnown RBP12.01□□□□□ -0.49
HDAC3-214ENST00000495485 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
HDAC3-214ENST00000495485 TOMM22Q9NS69 142 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 TAF6LQ9Y6J9 622 aa12.01□□□□□ -0.49
HDAC3-214ENST00000495485 CCDC69A6NI79 296 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 H3BQV1 296 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 LARGE1O95461 756 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 PRDX5P30044 214 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 USP5P45974 858 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 TNNI2P48788 182 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 RBM5P52756 815 aaKnown RBP eCLIP12□□□□□ -0.49
HDAC3-214ENST00000495485 PPP4CP60510 307 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 APOBRQ0VD83 1088 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 GSE1Q14687 1217 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 PPP2R5BQ15173 497 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 IFFO2Q5TF58 517 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 NECAB1Q8N987 351 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 TRPM4Q8TD43 1214 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 HOOK2Q96ED9 719 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 ZSCAN16Q9H4T2 348 aaPredicted RBP12□□□□□ -0.49
HDAC3-214ENST00000495485 GAKO14976 1311 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 CEP350Q5VT06 3117 aa12□□□□□ -0.49
HDAC3-214ENST00000495485 KLF18A0A0U1RQI7 1052 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 MINDY4BA8MYZ0 360 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 IFIT3O14879 490 aaKnown RBP11.99□□□□□ -0.49
HDAC3-214ENST00000495485 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
HDAC3-214ENST00000495485 MBD3O95983 291 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 F13A1P00488 732 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 PDIA3P30101 505 aaKnown RBP11.99□□□□□ -0.49
HDAC3-214ENST00000495485 RCAN1P53805 252 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 HIRAP54198 1017 aaPredicted RBP11.99□□□□□ -0.49
HDAC3-214ENST00000495485 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 SBK1Q52WX2 424 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 TMEM67Q5HYA8 995 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 FAM83AQ86UY5 434 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 IQCA1Q86XH1 822 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 UBAC1Q9BSL1 405 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 LRRC2Q9BYS8 371 aa11.99□□□□□ -0.49
HDAC3-214ENST00000495485 EPB41L4AQ9HCS5 686 aaPredicted RBP11.99□□□□□ -0.49
HDAC3-214ENST00000495485 AATFQ9NY61 560 aaKnown RBP eCLIP11.99□□□□□ -0.49
HDAC3-214ENST00000495485 MROH7-TTC4A0A0A0MT08 1334 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 VPS37CA5D8V6 355 aaPredicted RBP11.98□□□□□ -0.49
HDAC3-214ENST00000495485 UNCXA6NJT0 531 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 B4E1Z4 1266 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 F8W031 263 aaPredicted RBP11.98□□□□□ -0.49
HDAC3-214ENST00000495485 PRKAB2O43741 272 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 NF2P35240 595 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 FKBP1BP68106 108 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 CTDSPL2Q05D32 466 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 SCRN1Q12765 414 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 WTAPQ15007 396 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 SPDYE2Q495Y8 402 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 KRT26Q7Z3Y9 468 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 SYAP1Q96A49 352 aaPredicted RBP11.98□□□□□ -0.49
HDAC3-214ENST00000495485 MXD3Q9BW11 206 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms