RNA–Protein interactions for RNA: ENST00000495042.1

GMNC-204, Transcript of geminin coiled-coil domain containing, human

TSL 1 (best)

Gene GMNC, Length 3,317 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMNC-204	ENST00000495042	LDLRAD1	Q5T700	205 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	WWC2	Q6AWC2	1192 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	TRIM65	Q6PJ69	517 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	ANKRD13B	Q86YJ7	626 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	RAVER1	Q8IY67	606 aa	Known RBP	5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	UPF1	Q92900	1129 aa	Known RBP eCLIP	5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	TATDN2	Q93075	761 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	KDM4F	A0A1W2PPD8	638 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	SHTN1	A0MZ66	631 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	TARSL2	A2RTX5	802 aa	Known RBP	5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	GOLGA6L4	A6NEF3	574 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	IFRD1	O00458	451 aa	Predicted RBP	5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	VAMP4	O75379	141 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	PDE1A	P54750	535 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	KIAA0753	Q2KHM9	967 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	SH3D19	Q5HYK7	790 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	SRGAP1	Q7Z6B7	1085 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	OGFOD1	Q8N543	542 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	AFAP1L1	Q8TED9	768 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	C8orf48	Q96LL4	319 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	PRAM1	Q96QH2	718 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	ADGRB3	O60242	1522 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	RTN2	O75298	545 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	CLK1	P49759	484 aa	Known RBP	5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	PIP4K2B	P78356	416 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	PPP2R3A	Q06190	1150 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	WHAMMP3	Q1A5X7	153 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	ACRBP	Q8NEB7	543 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	HOOK2	Q96ED9	719 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	NAA15	Q9BXJ9	866 aa	Known RBP	5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	ZSWIM4	Q9H7M6	989 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	GDPD2	Q9HCC8	539 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	TOMM22	Q9NS69	142 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	MYO6	Q9UM54	1294 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	EXOC6B	Q9Y2D4	811 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	CAMSAP1	Q5T5Y3	1602 aa		5.58	□□□□□ -1.52
GMNC-204	ENST00000495042	KIF20B	Q96Q89	1820 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	USP42	Q9H9J4	1324 aa	Known RBP	5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	SPDYE16	A6NNV3	312 aa	Predicted RBP	5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	BECN2	A8MW95	431 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	ABLIM1	O14639	778 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	MTA2	O94776	668 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	IFT88	Q13099	833 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	SLC5A9	Q2M3M2	681 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	CEP85	Q6P2H3	762 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	VPS37A	Q8NEZ2	397 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	CCHCR1	Q8TD31	782 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	TRERF1	Q96PN7	1200 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	NAP1L4	Q99733	375 aa	Known RBP	5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	PARD6B	Q9BYG5	372 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	USP27X	A6NNY8	438 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	STX10	O60499	249 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	INPP5B	P32019	993 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	GNAL	P38405	381 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	MAGEA8	P43361	318 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	MTHFS	P49914	203 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	AMPD3	Q01432	767 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	APBA1	Q02410	837 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	PPFIA1	Q13136	1202 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	CCDC92	Q53HC0	331 aa	Predicted RBP	5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	EP400NL	Q6ZTU2	488 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	CCDC170	Q8IYT3	715 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	NBPF15	Q8N660	670 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	LEO1	Q8WVC0	666 aa	Predicted RBP	5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	DTNBP1	Q96EV8	351 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	PDRG1	Q9NUG6	133 aa		5.57	□□□□□ -1.52
GMNC-204	ENST00000495042	TMEM238L	A0A1B0GVL6	79 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	FIBP	O43427	364 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	PDGFRB	P09619	1106 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	EPB41	P11171	864 aa	Known RBP	5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	HSD3B2	P26439	372 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	CCT2	P78371	535 aa	Known RBP	5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	SKOR1	P84550	965 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	CCDC70	Q6NSX1	233 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	KIAA1958	Q8N8K9	716 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	TSR2	Q969E8	191 aa	Known RBP	5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	MPHOSPH6	Q99547	160 aa	Known RBP	5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	VPS18	Q9P253	973 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	CACNA1F	O60840	1977 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	ABCC6	O95255	1503 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	OVOS2	A0A0G2JMS6	1433 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	OVOS2	A0A0J9YW53	1432 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	OVOS2	Q6IE36	1432 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	PPL	O60437	1756 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	GOLGA6L7	A0A1B0GV03	622 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042		A0A1W2PQ27	194 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042		A0A1W2PQ64	194 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042		A0A1W2PQD8	194 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042		H3BQF6	201 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	EZR	P15311	586 aa	Known RBP	5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	PDIA5	Q14554	519 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	SART3	Q15020	963 aa	Known RBP	5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	PPP2R5A	Q15172	486 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	E2F5	Q15329	346 aa		5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	ENOX2	Q16206	610 aa	Known RBP	5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	RNF187	Q5TA31	235 aa	Predicted RBP	5.56	□□□□□ -1.52
GMNC-204	ENST00000495042	UBE3B	Q7Z3V4	1068 aa		5.56	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms