RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 POLD1P28340 1107 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 METAP2P50579 478 aaKnown RBP eCLIP13.45□□□□□ -0.267e-9■■■□□ 15.7
HDLBP-245ENST00000494862 RCAN1P53805 252 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 RHBDL3P58872 404 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 TGFB2P61812 414 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 PDE4BQ07343 736 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 CPLX2Q6PUV4 134 aaKnown RBP13.45□□□□□ -0.26
HDLBP-245ENST00000494862 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 TGFBRAP1Q8WUH2 860 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 MRIQ9BWK5 157 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 MTFR1LQ9H019 292 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 DBNDD1Q9H9R9 158 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 SENP2Q9HC62 589 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 TTF2Q9UNY4 1162 aaKnown RBP13.45□□□□□ -0.26
HDLBP-245ENST00000494862 SLC12A7Q9Y666 1083 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 GOLGA8AA7E2F4 631 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 H3BQV1 296 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 CPLX1O14810 134 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 CDKL5O76039 1030 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 SEC23AQ15436 765 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 IFFO2Q5TF58 517 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 HHIPL2Q6UWX4 724 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 CDC37L1Q7L3B6 337 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 MAPKAPK5Q8IW41 473 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-245ENST00000494862 PSMD1Q99460 953 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
HDLBP-245ENST00000494862 CHD4Q14839 1912 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 USP17L3A6NCW0 530 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 USP17L4A6NCW7 530 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 RANBP6O60518 1105 aaKnown RBP13.43□□□□□ -0.26
HDLBP-245ENST00000494862 PRPF40AO75400 957 aaKnown RBP13.43□□□□□ -0.26
HDLBP-245ENST00000494862 POLR3DP05423 398 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-245ENST00000494862 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
HDLBP-245ENST00000494862 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-245ENST00000494862 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
HDLBP-245ENST00000494862 AOC3Q16853 763 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 DACT2Q5SW24 774 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 USP17L1Q7RTZ2 530 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 RAB11FIP4Q86YS3 637 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 TMEM87AQ8NBN3 555 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 CHAMP1Q96JM3 812 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 ZKSCAN3Q9BRR0 538 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 MXD3Q9BW11 206 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 ORC3Q9UBD5 711 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-245ENST00000494862 MYH2Q9UKX2 1941 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 DLEC1Q9Y238 1755 aa13.43□□□□□ -0.26
HDLBP-245ENST00000494862 TNKSO95271 1327 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 F8W031 263 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-245ENST00000494862 PPIP5K2O43314 1243 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 PRDM1O75626 825 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
HDLBP-245ENST00000494862 EVX2Q03828 476 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 GSE1Q14687 1217 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 PPP2R5BQ15173 497 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 CSPP1Q1MSJ5 1256 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 MICU3Q86XE3 530 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 TEKT1Q969V4 418 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 VPS33BQ9H267 617 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-245ENST00000494862 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
HDLBP-245ENST00000494862 FAM217BQ9NTX9 383 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-245ENST00000494862 BAZ2AQ9UIF9 1905 aaKnown RBP13.42□□□□□ -0.26
HDLBP-245ENST00000494862 FLT1P17948 1338 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 LAMB1P07942 1786 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-245ENST00000494862 CDC27P30260 824 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 RESTQ13127 1097 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 RTN1Q16799 776 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 FOXD4L6Q3SYB3 417 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-245ENST00000494862 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 FOXD4L3Q6VB84 417 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-245ENST00000494862 ZNF654Q8IZM8 581 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 ENAHQ8N8S7 591 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-245ENST00000494862 ZDHHC15Q96MV8 337 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 ZNF287Q9HBT7 754 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 PIM2Q9P1W9 311 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 SAP30BPQ9UHR5 308 aaKnown RBP13.41□□□□□ -0.26
HDLBP-245ENST00000494862 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
HDLBP-245ENST00000494862 KIF13BQ9NQT8 1826 aa13.41□□□□□ -0.26
HDLBP-245ENST00000494862 STK36Q9NRP7 1315 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 MBD3O95983 291 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 IFNAR1P17181 557 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 RXRAP19793 462 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 CRKP46108 304 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 SCNN1DP51172 638 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 PLCD1P51178 756 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 DNM1Q05193 864 aaKnown RBP13.4□□□□□ -0.26
HDLBP-245ENST00000494862 R3HDM1Q15032 1099 aaKnown RBP13.4□□□□□ -0.26
HDLBP-245ENST00000494862 NTRK3Q16288 839 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 FAM47AQ5JRC9 791 aa13.4□□□□□ -0.26
HDLBP-245ENST00000494862 IFIT1BQ5T764 474 aaKnown RBP13.4□□□□□ -0.26
HDLBP-245ENST00000494862 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms