RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 TRIM47Q96LD4 638 aa14.3□□□□□ -0.12
VTI1A-208ENST00000494728 DNAJC18Q9H819 358 aa14.3□□□□□ -0.12
VTI1A-208ENST00000494728 TRIM75PA6NK02 468 aa14.29□□□□□ -0.12
VTI1A-208ENST00000494728 CXCL11O14625 94 aa14.29□□□□□ -0.12
VTI1A-208ENST00000494728 BCRP11274 1271 aa14.29□□□□□ -0.12
VTI1A-208ENST00000494728 NAA16Q6N069 864 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-208ENST00000494728 SH3TC2Q8TF17 1288 aa14.29□□□□□ -0.12
VTI1A-208ENST00000494728 ZNF512BQ96KM6 892 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-208ENST00000494728 PICK1Q9NRD5 415 aa14.29□□□□□ -0.12
VTI1A-208ENST00000494728 FLT1P17948 1338 aa14.29□□□□□ -0.12
VTI1A-208ENST00000494728 SZT2Q5T011 3432 aa14.29□□□□□ -0.12
VTI1A-208ENST00000494728 MYH8P13535 1937 aa14.29□□□□□ -0.12
VTI1A-208ENST00000494728 TBC1D12O60347 775 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 CTNND1O60716 968 aaKnown RBP14.28□□□□□ -0.12
VTI1A-208ENST00000494728 MYCP01106 439 aaPredicted RBP14.28□□□□□ -0.12
VTI1A-208ENST00000494728 LDHCP07864 332 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 EN2P19622 333 aaPredicted RBP14.28□□□□□ -0.12
VTI1A-208ENST00000494728 DYNLL1P63167 89 aaKnown RBP14.28□□□□□ -0.12
VTI1A-208ENST00000494728 JAG1P78504 1218 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 SLC9C1Q4G0N8 1177 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 CCDC158Q5M9N0 1113 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 TREML2Q5T2D2 321 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 GADL1Q6ZQY3 521 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 MAPKAPK5Q8IW41 473 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 SIRT2Q8IXJ6 389 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 ANTXR1Q9H6X2 564 aa14.28□□□□□ -0.12
VTI1A-208ENST00000494728 BAZ2AQ9UIF9 1905 aaKnown RBP14.27□□□□□ -0.12
VTI1A-208ENST00000494728 SLC4A8Q2Y0W8 1093 aa14.27□□□□□ -0.13
VTI1A-208ENST00000494728 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
VTI1A-208ENST00000494728 PARK7Q99497 189 aaKnown RBP14.27□□□□□ -0.13
VTI1A-208ENST00000494728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.27□□□□□ -0.13
VTI1A-208ENST00000494728 IL1RAPL2Q9NP60 686 aa14.27□□□□□ -0.13
VTI1A-208ENST00000494728 COG6Q9Y2V7 657 aa14.27□□□□□ -0.13
VTI1A-208ENST00000494728 OSBPP22059 807 aa14.26□□□□□ -0.13
VTI1A-208ENST00000494728 PSMC4P43686 418 aa14.26□□□□□ -0.13
VTI1A-208ENST00000494728 PPP4CP60510 307 aa14.26□□□□□ -0.13
VTI1A-208ENST00000494728 AACSQ86V21 672 aa14.26□□□□□ -0.13
VTI1A-208ENST00000494728 TGFBRAP1Q8WUH2 860 aa14.26□□□□□ -0.13
VTI1A-208ENST00000494728 LAMA3Q16787 3333 aa14.25□□□□□ -0.13
VTI1A-208ENST00000494728 MAP4K4O95819 1239 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-208ENST00000494728 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-208ENST00000494728 CAP2P40123 477 aa14.25□□□□□ -0.13
VTI1A-208ENST00000494728 PRKCZQ05513 592 aa14.25□□□□□ -0.13
VTI1A-208ENST00000494728 C20orf194Q5TEA3 1177 aa14.25□□□□□ -0.13
VTI1A-208ENST00000494728 PRPF38BQ5VTL8 546 aaKnown RBP14.25□□□□□ -0.13
VTI1A-208ENST00000494728 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
VTI1A-208ENST00000494728 SRRDQ9UH36 339 aa14.25□□□□□ -0.13
VTI1A-208ENST00000494728 SAP30BPQ9UHR5 308 aaKnown RBP14.25□□□□□ -0.13
VTI1A-208ENST00000494728 PALD1Q9ULE6 856 aa14.25□□□□□ -0.13
VTI1A-208ENST00000494728 TRIOBPQ9H2D6 2365 aa14.25□□□□□ -0.13
VTI1A-208ENST00000494728 MYPNQ86TC9 1320 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 ALPK3Q96L96 1907 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 IDH1O75874 414 aaKnown RBP14.24□□□□□ -0.13
VTI1A-208ENST00000494728 CYP7A1P22680 504 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 SPP2Q13103 211 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 KIF22Q14807 665 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 MTFR1Q15390 333 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 FASTKD5Q7L8L6 764 aaKnown RBP14.24□□□□□ -0.13
VTI1A-208ENST00000494728 MAGEB6Q8N7X4 407 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 RHPN1Q8TCX5 695 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 ZBTB40Q9NUA8 1239 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 GABRQQ9UN88 632 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 AGTPBP1Q9UPW5 1226 aa14.24□□□□□ -0.13
VTI1A-208ENST00000494728 DNAH12Q6ZR08 3092 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 APBB1O00213 710 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 GDF11O95390 407 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 SLC34A2O95436 690 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 BAG3O95817 575 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 HMGCS2P54868 508 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 EVX2Q03828 476 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 METTL16Q86W50 562 aaKnown RBP14.23□□□□□ -0.13
VTI1A-208ENST00000494728 SHISA4Q96DD7 197 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 NOL10Q9BSC4 688 aaKnown RBP14.23□□□□□ -0.13
VTI1A-208ENST00000494728 HERC5Q9UII4 1024 aaKnown RBP14.23□□□□□ -0.13
VTI1A-208ENST00000494728 SLC45A1Q9Y2W3 748 aa14.23□□□□□ -0.13
VTI1A-208ENST00000494728 FMNL1O95466 1100 aaPredicted RBP14.22□□□□□ -0.13
VTI1A-208ENST00000494728 GNRH1P01148 92 aa14.22□□□□□ -0.13
VTI1A-208ENST00000494728 ARHGEF6Q15052 776 aa14.22□□□□□ -0.13
VTI1A-208ENST00000494728 ZNF280CQ8ND82 737 aa14.22□□□□□ -0.13
VTI1A-208ENST00000494728 EDC3Q96F86 508 aaKnown RBP14.22□□□□□ -0.13
VTI1A-208ENST00000494728 DHX36Q9H2U1 1008 aaKnown RBP14.22□□□□□ -0.13
VTI1A-208ENST00000494728 PI4KBQ9UBF8 816 aa14.22□□□□□ -0.13
VTI1A-208ENST00000494728 PARP14Q460N5 1801 aa14.21□□□□□ -0.13
VTI1A-208ENST00000494728 PEX10O60683 326 aa14.21□□□□□ -0.13
VTI1A-208ENST00000494728 PLCG2P16885 1265 aa14.21□□□□□ -0.13
VTI1A-208ENST00000494728 ERC1Q8IUD2 1116 aa14.21□□□□□ -0.13
VTI1A-208ENST00000494728 PROCA1Q8NCQ7 364 aaPredicted RBP14.21□□□□□ -0.13
VTI1A-208ENST00000494728 RIOK1Q9BRS2 568 aaKnown RBP14.21□□□□□ -0.13
VTI1A-208ENST00000494728 RCAN3Q9UKA8 241 aa14.21□□□□□ -0.13
VTI1A-208ENST00000494728 DDX19BQ9UMR2 479 aa14.21□□□□□ -0.13
VTI1A-208ENST00000494728 RLFQ13129 1914 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 USP17L5A8MUK1 530 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 GRK4P32298 578 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 PRMT2P55345 433 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 FCGRTP55899 365 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 MTMR2Q13614 643 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 SLFNL1Q499Z3 407 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 SH3D19Q5HYK7 790 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 NBPF11Q86T75 865 aa14.2□□□□□ -0.14
VTI1A-208ENST00000494728 ANKRD13CQ8N6S4 541 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms