RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 EVI5O60447 810 aa11.85□□□□□ -0.51
UBR4-216ENST00000494503 GNAI2P04899 355 aa11.85□□□□□ -0.51
UBR4-216ENST00000494503 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
UBR4-216ENST00000494503 SNRKQ9NRH2 765 aa11.85□□□□□ -0.51
UBR4-216ENST00000494503 SLC45A1Q9Y2W3 748 aa11.85□□□□□ -0.51
UBR4-216ENST00000494503 SGPL1O95470 568 aa11.84□□□□□ -0.51
UBR4-216ENST00000494503 RHBDL3P58872 404 aa11.84□□□□□ -0.51
UBR4-216ENST00000494503 IRX3P78415 501 aaPredicted RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 PABPC4Q13310 644 aaKnown RBP eCLIP11.84□□□□□ -0.51
UBR4-216ENST00000494503 CCAR1Q8IX12 1150 aaKnown RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 ZNF280CQ8ND82 737 aa11.84□□□□□ -0.51
UBR4-216ENST00000494503 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 FAM163AQ96GL9 167 aaPredicted RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 OSBPL5Q9H0X9 879 aaPredicted RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 AS3MTQ9HBK9 375 aa11.84□□□□□ -0.51
UBR4-216ENST00000494503 AATFQ9NY61 560 aaKnown RBP eCLIP11.84□□□□□ -0.51
UBR4-216ENST00000494503 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
UBR4-216ENST00000494503 LOC285556D6RIA3 1793 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 MAST2Q6P0Q8 1798 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 USP17L5A8MUK1 530 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 BAG3O95817 575 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 UQCRFS1P1P0C7P4 283 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 MCAMP43121 646 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 FAM110CQ1W6H9 321 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 NAA16Q6N069 864 aaPredicted RBP11.83□□□□□ -0.52
UBR4-216ENST00000494503 MAPKAPK5Q8IW41 473 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
UBR4-216ENST00000494503 CWC22Q9HCG8 908 aaKnown RBP11.83□□□□□ -0.52
UBR4-216ENST00000494503 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 TNNQ9UQP3 1299 aa11.83□□□□□ -0.52
UBR4-216ENST00000494503 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 TBC1D12O60347 775 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 BCAR3O75815 825 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 TRIM27P14373 513 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 CAP2P40123 477 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 MTMR2Q13614 643 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 CCDC158Q5M9N0 1113 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 ATF7IPQ6VMQ6 1270 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
UBR4-216ENST00000494503 PXYLP1Q8TE99 480 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 ZNF384Q8TF68 577 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 ARHGAP45Q92619 1136 aa11.82□□□□□ -0.52
UBR4-216ENST00000494503 MYO5AQ9Y4I1 1855 aaKnown RBP11.82□□□□□ -0.52
UBR4-216ENST00000494503 CDK5RAP2Q96SN8 1893 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 GDF11O95390 407 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 ARID4AP29374 1257 aaPredicted RBP11.81□□□□□ -0.52
UBR4-216ENST00000494503 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
UBR4-216ENST00000494503 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 MTX1Q13505 466 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 IRF5Q13568 498 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 FTSJ3Q8IY81 847 aaKnown RBP11.81□□□□□ -0.52
UBR4-216ENST00000494503 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 PAWRQ96IZ0 340 aaKnown RBP11.81□□□□□ -0.52
UBR4-216ENST00000494503 TBC1D2Q9BYX2 928 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.81□□□□□ -0.52
UBR4-216ENST00000494503 BCL11AQ9H165 835 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 ASCC2Q9H1I8 757 aaPredicted RBP11.81□□□□□ -0.52
UBR4-216ENST00000494503 C1orf115Q9H7X2 142 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 PI4KBQ9UBF8 816 aa11.81□□□□□ -0.52
UBR4-216ENST00000494503 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
UBR4-216ENST00000494503 HERC5Q9UII4 1024 aaKnown RBP11.81□□□□□ -0.52
UBR4-216ENST00000494503 RANBP2P49792 3224 aaKnown RBP11.81□□□□□ -0.52
UBR4-216ENST00000494503 SURF6O75683 361 aaKnown RBP11.8□□□□□ -0.52
UBR4-216ENST00000494503 MAP4K4O95819 1239 aaPredicted RBP11.8□□□□□ -0.52
UBR4-216ENST00000494503 HMGCRP04035 888 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 HLA-DOAP06340 250 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 PLCG2P16885 1265 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 CYP2B6P20813 491 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 C7orf61Q8IZ16 206 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 PAGR1Q9BTK6 254 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 SZT2Q5T011 3432 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 MYH1P12882 1939 aa11.8□□□□□ -0.52
UBR4-216ENST00000494503 COL2A1P02458 1487 aaPredicted RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 ZBTB7BO15156 539 aaPredicted RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 NPM3O75607 178 aaKnown RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 ASNSP08243 561 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 PDE3AQ14432 1141 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 ZYXQ15942 572 aaKnown RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 TNNI3KQ59H18 835 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 WDR78Q5VTH9 848 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 NECAB2Q7Z6G3 386 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 UBE2Q1Q7Z7E8 422 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 ITPRIPQ8IWB1 547 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 DIS3LQ8TF46 1054 aaKnown RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 FEZ1Q99689 392 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 DHX36Q9H2U1 1008 aaKnown RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 HMX1Q9NP08 348 aaPredicted RBP11.79□□□□□ -0.52
UBR4-216ENST00000494503 PALD1Q9ULE6 856 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 FPGT-TNNI3KV9GXZ4 949 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 ALPK3Q96L96 1907 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 FLT1P17948 1338 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 SIPA1L1O43166 1804 aa11.79□□□□□ -0.52
UBR4-216ENST00000494503 FOCADQ5VW36 1801 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms