RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 RIOK1Q9BRS2 568 aaKnown RBP26.52■■□□□ 1.84
HPS3-207ENST00000494327 TRIM34Q9BYJ4 488 aa26.52■■□□□ 1.84
HPS3-207ENST00000494327 TCRBV5S4A2TA0A5A2 114 aa26.51■■□□□ 1.83
HPS3-207ENST00000494327 PTPRAP18433 802 aa26.51■■□□□ 1.83
HPS3-207ENST00000494327 CRHR2Q13324 411 aa26.51■■□□□ 1.83
HPS3-207ENST00000494327 AAMPQ13685 434 aa26.51■■□□□ 1.83
HPS3-207ENST00000494327 FAM43AQ8N2R8 423 aa26.51■■□□□ 1.83
HPS3-207ENST00000494327 CRACR2BQ8N4Y2 399 aaPredicted RBP26.51■■□□□ 1.83
HPS3-207ENST00000494327 MCOLN1Q9GZU1 580 aa26.51■■□□□ 1.83
HPS3-207ENST00000494327 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.51■■□□□ 1.83
HPS3-207ENST00000494327 HERC5Q9UII4 1024 aaKnown RBP26.51■■□□□ 1.83
HPS3-207ENST00000494327 HLA-DOAP06340 250 aa26.5■■□□□ 1.83
HPS3-207ENST00000494327 ADD2P35612 726 aa26.5■■□□□ 1.83
HPS3-207ENST00000494327 HDAC1Q13547 482 aaPredicted RBP26.5■■□□□ 1.83
HPS3-207ENST00000494327 TAF1CQ15572 869 aaPredicted RBP26.5■■□□□ 1.83
HPS3-207ENST00000494327 BTBD19C9JJ37 291 aa26.49■■□□□ 1.83
HPS3-207ENST00000494327 FKTNO75072 461 aa26.49■■□□□ 1.83
HPS3-207ENST00000494327 CHGBP05060 677 aa26.49■■□□□ 1.83
HPS3-207ENST00000494327 CCDC84Q86UT8 332 aaPredicted RBP26.49■■□□□ 1.83
HPS3-207ENST00000494327 FOXP4Q8IVH2 680 aaPredicted RBP26.49■■□□□ 1.83
HPS3-207ENST00000494327 OTUD7AQ8TE49 926 aaPredicted RBP26.49■■□□□ 1.83
HPS3-207ENST00000494327 GCC1Q96CN9 775 aa26.49■■□□□ 1.83
HPS3-207ENST00000494327 KCNH4Q9UQ05 1017 aa26.49■■□□□ 1.83
HPS3-207ENST00000494327 RRP1BQ14684 758 aaKnown RBP26.48■■□□□ 1.83
HPS3-207ENST00000494327 NOM1Q5C9Z4 860 aaKnown RBP26.48■■□□□ 1.83
HPS3-207ENST00000494327 LCORLQ8N3X6 602 aa26.48■■□□□ 1.83
HPS3-207ENST00000494327 CRNKL1Q9BZJ0 848 aaKnown RBP26.48■■□□□ 1.83
HPS3-207ENST00000494327 ARMT1Q9H993 441 aa26.48■■□□□ 1.83
HPS3-207ENST00000494327 CAP2P40123 477 aa26.47■■□□□ 1.83
HPS3-207ENST00000494327 ZSCAN25Q6NSZ9 544 aa26.47■■□□□ 1.83
HPS3-207ENST00000494327 ABHD8Q96I13 439 aa26.47■■□□□ 1.83
HPS3-207ENST00000494327 ZFYVE28Q9HCC9 887 aa26.47■■□□□ 1.83
HPS3-207ENST00000494327 CXCL11O14625 94 aa26.46■■□□□ 1.83
HPS3-207ENST00000494327 CTU1Q7Z7A3 348 aaKnown RBP26.46■■□□□ 1.83
HPS3-207ENST00000494327 RWDD1Q9H446 243 aaPredicted RBP26.46■■□□□ 1.83
HPS3-207ENST00000494327 AFG3L2Q9Y4W6 797 aa26.46■■□□□ 1.83
HPS3-207ENST00000494327 LAMB1P07942 1786 aa26.46■■□□□ 1.83
HPS3-207ENST00000494327 TTC41PQ6P2S7 1318 aa26.45■■□□□ 1.83
HPS3-207ENST00000494327 TRIM75PA6NK02 468 aa26.45■■□□□ 1.82
HPS3-207ENST00000494327 ERC2O15083 957 aa26.45■■□□□ 1.82
HPS3-207ENST00000494327 MBD4O95243 580 aa26.45■■□□□ 1.82
HPS3-207ENST00000494327 UBE3CQ15386 1083 aa26.45■■□□□ 1.82
HPS3-207ENST00000494327 SDR42E1Q8WUS8 393 aa26.45■■□□□ 1.82
HPS3-207ENST00000494327 DNAJC18Q9H819 358 aa26.45■■□□□ 1.82
HPS3-207ENST00000494327 POLR3DP05423 398 aaPredicted RBP26.44■■□□□ 1.82
HPS3-207ENST00000494327 MX1P20591 662 aa26.44■■□□□ 1.82
HPS3-207ENST00000494327 IRX6P78412 446 aaPredicted RBP26.44■■□□□ 1.82
HPS3-207ENST00000494327 TTC6Q86TZ1 520 aa26.44■■□□□ 1.82
HPS3-207ENST00000494327 CDK5RAP2Q96SN8 1893 aa26.43■■□□□ 1.82
HPS3-207ENST00000494327 PDHXO00330 501 aa26.43■■□□□ 1.82
HPS3-207ENST00000494327 GADL1Q6ZQY3 521 aa26.43■■□□□ 1.82
HPS3-207ENST00000494327 ANKRD23Q86SG2 305 aa26.43■■□□□ 1.82
HPS3-207ENST00000494327 METTL16Q86W50 562 aaKnown RBP26.43■■□□□ 1.82
HPS3-207ENST00000494327 KBTBD3Q8NAB2 608 aa26.43■■□□□ 1.82
HPS3-207ENST00000494327 MCM9Q9NXL9 1143 aa26.43■■□□□ 1.82
HPS3-207ENST00000494327 PRKAB2O43741 272 aa26.42■■□□□ 1.82
HPS3-207ENST00000494327 GDF11O95390 407 aa26.42■■□□□ 1.82
HPS3-207ENST00000494327 MOGSQ13724 837 aa26.42■■□□□ 1.82
HPS3-207ENST00000494327 B4GALNT3Q6L9W6 998 aa26.42■■□□□ 1.82
HPS3-207ENST00000494327 PI4K2BQ8TCG2 481 aa26.42■■□□□ 1.82
HPS3-207ENST00000494327 ZCCHC17Q9NP64 241 aaKnown RBP26.42■■□□□ 1.82
HPS3-207ENST00000494327 FOCADQ5VW36 1801 aa26.42■■□□□ 1.82
HPS3-207ENST00000494327 A0A0G2JLL6 359 aaPredicted RBP26.41■■□□□ 1.82
HPS3-207ENST00000494327 USP17L5A8MUK1 530 aa26.41■■□□□ 1.82
HPS3-207ENST00000494327 GLRX3O76003 335 aaKnown RBP26.41■■□□□ 1.82
HPS3-207ENST00000494327 IGHDP01880 384 aa26.41■■□□□ 1.82
HPS3-207ENST00000494327 PLCD1P51178 756 aa26.41■■□□□ 1.82
HPS3-207ENST00000494327 SP3Q02447 781 aa26.41■■□□□ 1.82
HPS3-207ENST00000494327 SPP2Q13103 211 aa26.41■■□□□ 1.82
HPS3-207ENST00000494327 FASTKD5Q7L8L6 764 aaKnown RBP26.41■■□□□ 1.82
HPS3-207ENST00000494327 PRRT2Q7Z6L0 340 aaPredicted RBP26.41■■□□□ 1.82
HPS3-207ENST00000494327 PUS7LQ9H0K6 701 aaKnown RBP26.41■■□□□ 1.82
HPS3-207ENST00000494327 DCP1AQ9NPI6 582 aaPredicted RBP26.41■■□□□ 1.82
HPS3-207ENST00000494327 SERPINB13Q9UIV8 391 aa26.41■■□□□ 1.82
HPS3-207ENST00000494327 JAG1P78504 1218 aa26.4■■□□□ 1.82
HPS3-207ENST00000494327 GPAT2Q6NUI2 795 aa26.4■■□□□ 1.82
HPS3-207ENST00000494327 CD99L2Q8TCZ2 262 aa26.4■■□□□ 1.82
HPS3-207ENST00000494327 DOCK1Q14185 1865 aa26.4■■□□□ 1.82
HPS3-207ENST00000494327 CCDC85CA6NKD9 419 aa26.39■■□□□ 1.82
HPS3-207ENST00000494327 TLR2O60603 784 aa26.39■■□□□ 1.82
HPS3-207ENST00000494327 SHROOM1Q2M3G4 852 aaPredicted RBP26.39■■□□□ 1.82
HPS3-207ENST00000494327 ZNF280CQ8ND82 737 aa26.39■■□□□ 1.82
HPS3-207ENST00000494327 ERO1AQ96HE7 468 aa26.39■■□□□ 1.82
HPS3-207ENST00000494327 EHD4Q9H223 541 aa26.39■■□□□ 1.82
HPS3-207ENST00000494327 SLC4A4Q9Y6R1 1079 aa26.39■■□□□ 1.82
HPS3-207ENST00000494327 SIPA1L1O43166 1804 aa26.39■■□□□ 1.81
HPS3-207ENST00000494327 RNF113AO15541 343 aaKnown RBP26.38■■□□□ 1.81
HPS3-207ENST00000494327 ASNSP08243 561 aa26.38■■□□□ 1.81
HPS3-207ENST00000494327 LNPKQ9C0E8 428 aa26.38■■□□□ 1.81
HPS3-207ENST00000494327 AS3MTQ9HBK9 375 aa26.38■■□□□ 1.81
HPS3-207ENST00000494327 CYP2D6P10635 497 aa26.37■■□□□ 1.81
HPS3-207ENST00000494327 EVX2Q03828 476 aa26.37■■□□□ 1.81
HPS3-207ENST00000494327 SMC5Q8IY18 1101 aa26.37■■□□□ 1.81
HPS3-207ENST00000494327 TBC1D2Q9BYX2 928 aa26.37■■□□□ 1.81
HPS3-207ENST00000494327 ATP8A2Q9NTI2 1148 aa26.37■■□□□ 1.81
HPS3-207ENST00000494327 TRIM17Q9Y577 477 aa26.37■■□□□ 1.81
HPS3-207ENST00000494327 MYH1P12882 1939 aa26.37■■□□□ 1.81
HPS3-207ENST00000494327 SALL3Q9BXA9 1300 aa26.37■■□□□ 1.81
HPS3-207ENST00000494327 PKN2Q16513 984 aaKnown RBP26.36■■□□□ 1.81
HPS3-207ENST00000494327 FSD1Q9BTV5 496 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms