RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PF4P02776 101 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 ITGB2P05107 769 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 NFICP08651 508 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 IMPDH2P12268 514 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 TFE3P19532 575 aaPredicted RBP3.83□□□□□ -1.8
LMNB1-207ENST00000494185 ETV3P41162 512 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 RBM10P98175 930 aaKnown RBP3.83□□□□□ -1.8
LMNB1-207ENST00000494185 CAMK2GQ13555 558 aaPredicted RBP3.83□□□□□ -1.8
LMNB1-207ENST00000494185 SEPT6Q14141 434 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 ZMYM1Q5SVZ6 1142 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 ZBTB37Q5TC79 503 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 ZAR1Q86SH2 424 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 NBPF11Q86T75 865 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 METTL16Q86W50 562 aaKnown RBP3.83□□□□□ -1.8
LMNB1-207ENST00000494185 NT5DC4Q86YG4 428 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 KIAA0825Q8IV33 1275 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 FBXL6Q8N531 539 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 GATAD2BQ8WXI9 593 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 GAL3ST3Q96A11 431 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 MISP3Q96FF7 219 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 WDR89Q96FK6 387 aaPredicted RBP3.83□□□□□ -1.8
LMNB1-207ENST00000494185 MFSD14AQ96MC6 490 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 WNT10AQ9GZT5 417 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 COPRSQ9NQ92 184 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 PCMTD2Q9NV79 361 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 CACNA2D2Q9NY47 1150 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 PPP1R9AQ9ULJ8 1098 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 PCDHB5Q9Y5E4 795 aa3.83□□□□□ -1.8
LMNB1-207ENST00000494185 DCDC2CA8MYV0 355 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 WDR64B1ANS9 1081 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 CYP26A1O43174 497 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 PGRP06401 933 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 ERCC5P28715 1186 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-207ENST00000494185 EIF4A3P38919 411 aaKnown RBP3.82□□□□□ -1.8
LMNB1-207ENST00000494185 ZNF165P49910 485 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 FAM160A1Q05DH4 1040 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 APOBRQ0VD83 1088 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 COL9A2Q14055 689 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-207ENST00000494185 LRP8Q14114 963 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 LRRFIP1Q32MZ4 808 aaKnown RBP3.82□□□□□ -1.8
LMNB1-207ENST00000494185 ZNF394Q53GI3 561 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 C9orf131Q5VYM1 1079 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 CDPF1Q6NVV7 123 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 MPRIPQ6WCQ1 1025 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 ZNF654Q8IZM8 581 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 GOLM1Q8NBJ4 401 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 SHKBP1Q8TBC3 707 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 JARID2Q92833 1246 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-207ENST00000494185 SYTL4Q96C24 671 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-207ENST00000494185 PLPPR2Q96GM1 343 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 MKNK2Q9HBH9 465 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 PRDM5Q9NQX1 630 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-207ENST00000494185 PRKAG2Q9UGJ0 569 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 PCDHGC5Q9Y5F6 944 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 PCDHGB7Q9Y5F8 929 aa3.82□□□□□ -1.8
LMNB1-207ENST00000494185 F13A1P00488 732 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 CAP2P40123 477 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 PTPN11Q06124 597 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-207ENST00000494185 RAD51AP2Q09MP3 1159 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 PPM1JQ5JR12 505 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 SLC6A19Q695T7 634 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 OGFOD3Q6PK18 319 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 BNC2Q6ZN30 1099 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-207ENST00000494185 VPS37DQ86XT2 251 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 AGBL5Q8NDL9 886 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 ZNF296Q8WUU4 475 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-207ENST00000494185 ISL2Q96A47 359 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 FBXL18Q96ME1 805 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 SPON2Q9BUD6 331 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 FOXQ1Q9C009 403 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 TGIF2Q9GZN2 237 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 CCSER2Q9H7U1 834 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 PRDM10Q9NQV6 1147 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 DISC1Q9NRI5 854 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 IGSF5Q9NSI5 407 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 DDX41Q9UJV9 622 aaKnown RBP3.81□□□□□ -1.8
LMNB1-207ENST00000494185 TPX2Q9ULW0 747 aaKnown RBP3.81□□□□□ -1.8
LMNB1-207ENST00000494185 MAPK8IP1Q9UQF2 711 aa3.81□□□□□ -1.8
LMNB1-207ENST00000494185 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-207ENST00000494185 FAM87AP0C7U9 286 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 FOSL1P15407 271 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 PLCG1P19174 1290 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 GRK4P32298 578 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 TNNI2P48788 182 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 RACK1P63244 317 aaKnown RBP3.8□□□□□ -1.8
LMNB1-207ENST00000494185 RNF4P78317 190 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 XP32Q5T750 250 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 FBXL19Q6PCT2 694 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 LRFN4Q6PJG9 635 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.8□□□□□ -1.8
LMNB1-207ENST00000494185 FAM196AQ6ZSG2 479 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 ARMCX6Q7L4S7 300 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 CYFIP1Q7L576 1253 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 REC114Q7Z4M0 266 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 VSIG10LQ86VR7 867 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 C12orf40Q86WS4 652 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 CCDC120Q96HB5 630 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 LRRC3Q9BY71 257 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 KRTAP4-8Q9BYQ9 185 aa3.8□□□□□ -1.8
LMNB1-207ENST00000494185 ASCC2Q9H1I8 757 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms