RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SCYL3Q8IZE3 742 aa10.45□□□□□ -0.74
LRCH3-219ENST00000494069 EFCC1Q9HA90 598 aa10.45□□□□□ -0.74
LRCH3-219ENST00000494069 PTPN22Q9Y2R2 807 aa10.45□□□□□ -0.74
LRCH3-219ENST00000494069 ZHX2Q9Y6X8 837 aa10.45□□□□□ -0.74
LRCH3-219ENST00000494069 DOCK2Q92608 1830 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 PDHXO00330 501 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 IDH1O75874 414 aaKnown RBP10.44□□□□□ -0.74
LRCH3-219ENST00000494069 MS4A1P11836 297 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 CYP7A1P22680 504 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 CTGFP29279 349 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 PPP4CP60510 307 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 ANKRD23Q86SG2 305 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 ERC1Q8IUD2 1116 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 MAPKAPK5Q8IW41 473 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 RPAP2Q8IXW5 612 aaPredicted RBP10.44□□□□□ -0.74
LRCH3-219ENST00000494069 TGFBRAP1Q8WUH2 860 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.44□□□□□ -0.74
LRCH3-219ENST00000494069 PICK1Q9NRD5 415 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 CPA4Q9UI42 421 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 DDX19BQ9UMR2 479 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 AFG3L2Q9Y4W6 797 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 CENPFP49454 3210 aa10.44□□□□□ -0.74
LRCH3-219ENST00000494069 ZSWIM8A7E2V4 1837 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 CXCL11O14625 94 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 TBC1D12O60347 775 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 CTNND1O60716 968 aaKnown RBP10.43□□□□□ -0.74
LRCH3-219ENST00000494069 CYP2C8P10632 490 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 JAG1P78504 1218 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 SHROOM1Q2M3G4 852 aaPredicted RBP10.43□□□□□ -0.74
LRCH3-219ENST00000494069 SLC4A8Q2Y0W8 1093 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 C17orf99Q6UX52 265 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 MAGEB6Q8N7X4 407 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 MIGA1Q8NAN2 632 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 EDC3Q96F86 508 aaKnown RBP10.43□□□□□ -0.74
LRCH3-219ENST00000494069 ZCCHC17Q9NP64 241 aaKnown RBP10.43□□□□□ -0.74
LRCH3-219ENST00000494069 SAP30BPQ9UHR5 308 aaKnown RBP10.43□□□□□ -0.74
LRCH3-219ENST00000494069 PALD1Q9ULE6 856 aa10.43□□□□□ -0.74
LRCH3-219ENST00000494069 TNRC18O15417 2968 aaPredicted RBP10.43□□□□□ -0.74
LRCH3-219ENST00000494069 ADGRA2Q96PE1 1338 aa10.42□□□□□ -0.74
LRCH3-219ENST00000494069 A0A0G2JLL6 359 aaPredicted RBP10.42□□□□□ -0.74
LRCH3-219ENST00000494069 TRIM75PA6NK02 468 aa10.42□□□□□ -0.74
LRCH3-219ENST00000494069 BAG3O95817 575 aa10.42□□□□□ -0.74
LRCH3-219ENST00000494069 MAP4K4O95819 1239 aaPredicted RBP10.42□□□□□ -0.74
LRCH3-219ENST00000494069 HSP90AB4PQ58FF6 505 aa10.42□□□□□ -0.74
LRCH3-219ENST00000494069 GADL1Q6ZQY3 521 aa10.42□□□□□ -0.74
LRCH3-219ENST00000494069 PRRT2Q7Z6L0 340 aaPredicted RBP10.42□□□□□ -0.74
LRCH3-219ENST00000494069 NOL10Q9BSC4 688 aaKnown RBP10.42□□□□□ -0.74
LRCH3-219ENST00000494069 DNAJC18Q9H819 358 aa10.42□□□□□ -0.74
LRCH3-219ENST00000494069 PTCH2Q9Y6C5 1203 aa10.42□□□□□ -0.74
LRCH3-219ENST00000494069 FLT1P17948 1338 aa10.41□□□□□ -0.74
LRCH3-219ENST00000494069 POTEFA5A3E0 1075 aa10.41□□□□□ -0.74
LRCH3-219ENST00000494069 SMARCA5O60264 1052 aaPredicted RBP10.41□□□□□ -0.74
LRCH3-219ENST00000494069 CAP2P40123 477 aa10.41□□□□□ -0.74
LRCH3-219ENST00000494069 LACTBP83111 547 aaPredicted RBP10.41□□□□□ -0.74
LRCH3-219ENST00000494069 PDE3AQ14432 1141 aa10.41□□□□□ -0.74
LRCH3-219ENST00000494069 SLFNL1Q499Z3 407 aa10.41□□□□□ -0.74
LRCH3-219ENST00000494069 CLASRPQ8N2M8 674 aaKnown RBP10.41□□□□□ -0.74
LRCH3-219ENST00000494069 KIF1BPQ96EK5 621 aa10.41□□□□□ -0.74
LRCH3-219ENST00000494069 PI4KBQ9UBF8 816 aa10.41□□□□□ -0.74
LRCH3-219ENST00000494069 COL2A1P02458 1487 aaPredicted RBP10.41□□□□□ -0.74
LRCH3-219ENST00000494069 SIPA1L1O43166 1804 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 MAST2Q6P0Q8 1798 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 GOLIM4O00461 696 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 RAB11FIP3O75154 756 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 HMMRO75330 724 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 MYCP01106 439 aaPredicted RBP10.4□□□□□ -0.74
LRCH3-219ENST00000494069 CHGBP05060 677 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 IFIT2P09913 472 aaKnown RBP10.4□□□□□ -0.74
LRCH3-219ENST00000494069 PLCG2P16885 1265 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 PSMC4P43686 418 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 SPP2Q13103 211 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 TREML2Q5T2D2 321 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 FASTKD5Q7L8L6 764 aaKnown RBP10.4□□□□□ -0.74
LRCH3-219ENST00000494069 PLCD3Q8N3E9 789 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.74
LRCH3-219ENST00000494069 BOLA2Q9H3K6 86 aa10.4□□□□□ -0.74
LRCH3-219ENST00000494069 DOCK1Q14185 1865 aa10.4□□□□□ -0.75
LRCH3-219ENST00000494069 PHIPQ8WWQ0 1821 aa10.4□□□□□ -0.75
LRCH3-219ENST00000494069 GDF11O95390 407 aa10.39□□□□□ -0.75
LRCH3-219ENST00000494069 BCRP11274 1271 aa10.39□□□□□ -0.75
LRCH3-219ENST00000494069 MAP3K12Q12852 859 aa10.39□□□□□ -0.75
LRCH3-219ENST00000494069 METTL16Q86W50 562 aaKnown RBP10.39□□□□□ -0.75
LRCH3-219ENST00000494069 SH3TC2Q8TF17 1288 aa10.39□□□□□ -0.75
LRCH3-219ENST00000494069 ARMC5Q96C12 935 aa10.39□□□□□ -0.75
LRCH3-219ENST00000494069 PARK7Q99497 189 aaKnown RBP10.39□□□□□ -0.75
LRCH3-219ENST00000494069 DHX36Q9H2U1 1008 aaKnown RBP10.39□□□□□ -0.75
LRCH3-219ENST00000494069 HERC5Q9UII4 1024 aaKnown RBP10.39□□□□□ -0.75
LRCH3-219ENST00000494069 CDK5RAP2Q96SN8 1893 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 BRCA2P51587 3418 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 TCRBV5S4A2TA0A5A2 114 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 USP17L5A8MUK1 530 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
LRCH3-219ENST00000494069 PDE6AP16499 860 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 EN2P19622 333 aaPredicted RBP10.38□□□□□ -0.75
LRCH3-219ENST00000494069 OSBPP22059 807 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 USP5P45974 858 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 HMGCS2P54868 508 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 KIF22Q14807 665 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 SLC9C2Q5TAH2 1124 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms