RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 RALYLQ86SE5 291 aaKnown RBP17.69■□□□□ 0.42
ACTB-213ENST00000493945 USP48Q86UV5 1035 aa17.69■□□□□ 0.42
ACTB-213ENST00000493945 IL25Q9H293 177 aa17.69■□□□□ 0.42
ACTB-213ENST00000493945 MKNK2Q9HBH9 465 aa17.69■□□□□ 0.42
ACTB-213ENST00000493945 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
ACTB-213ENST00000493945 ADM5C9JUS6 153 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 KIF3CO14782 793 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 IREB2P48200 963 aaKnown RBP17.68■□□□□ 0.42
ACTB-213ENST00000493945 FKBP1BP68106 108 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 FSTL1Q12841 308 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 CDCA5Q96FF9 252 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 ZNF341Q9BYN7 854 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 BACH2Q9BYV9 841 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 GLIS2Q9BZE0 524 aaPredicted RBP17.68■□□□□ 0.42
ACTB-213ENST00000493945 KRT23Q9C075 422 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.68■□□□□ 0.428e-14■■□□□ 13.4
ACTB-213ENST00000493945 TOMM22Q9NS69 142 aa17.68■□□□□ 0.42
ACTB-213ENST00000493945 DDTLA6NHG4 134 aaPredicted RBP17.67■□□□□ 0.42
ACTB-213ENST00000493945 PSMA5P28066 241 aa17.67■□□□□ 0.42
ACTB-213ENST00000493945 TTLL12Q14166 644 aaPredicted RBP17.67■□□□□ 0.42
ACTB-213ENST00000493945 AKNAD1Q5T1N1 836 aa17.67■□□□□ 0.42
ACTB-213ENST00000493945 C16orf86Q6ZW13 317 aa17.67■□□□□ 0.42
ACTB-213ENST00000493945 ARMC9Q7Z3E5 817 aa17.67■□□□□ 0.42
ACTB-213ENST00000493945 CCDC17Q96LX7 622 aa17.67■□□□□ 0.42
ACTB-213ENST00000493945 GINM1Q9NU53 330 aa17.67■□□□□ 0.42
ACTB-213ENST00000493945 PAPPA2Q9BXP8 1791 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 HMGB1P09429 215 aaKnown RBP17.66■□□□□ 0.42
ACTB-213ENST00000493945 HSPA4P34932 840 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 ANAPC15P60006 121 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 SLC4A8Q2Y0W8 1093 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 CREB3L3Q68CJ9 461 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 ZNF444Q8N0Y2 327 aaPredicted RBP17.66■□□□□ 0.42
ACTB-213ENST00000493945 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 ESR2Q92731 530 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 USP26Q9BXU7 913 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 CABP5Q9NP86 173 aa17.66■□□□□ 0.42
ACTB-213ENST00000493945 UNCXA6NJT0 531 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 SLC27A2O14975 620 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 FOXP2O15409 715 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 HAND2P61296 217 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 NECTIN1Q15223 517 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 CCDC178Q5BJE1 867 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 C2orf69Q8N8R5 385 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 NCOA7Q8NI08 942 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 TEPSINQ96N21 525 aa17.65■□□□□ 0.42
ACTB-213ENST00000493945 ORC4O43929 436 aa17.64■□□□□ 0.41
ACTB-213ENST00000493945 CYP21A2P08686 494 aa17.64■□□□□ 0.41
ACTB-213ENST00000493945 PLCD1P51178 756 aa17.64■□□□□ 0.41
ACTB-213ENST00000493945 SART3Q15020 963 aaKnown RBP17.64■□□□□ 0.41
ACTB-213ENST00000493945 NBPF12Q5TAG4 269 aaPredicted RBP17.64■□□□□ 0.41
ACTB-213ENST00000493945 METTL16Q86W50 562 aaKnown RBP17.64■□□□□ 0.41
ACTB-213ENST00000493945 ZFPM1Q8IX07 1006 aa17.64■□□□□ 0.41
ACTB-213ENST00000493945 C22orf23Q9BZE7 217 aa17.64■□□□□ 0.41
ACTB-213ENST00000493945 ZNF408Q9H9D4 720 aa17.64■□□□□ 0.41
ACTB-213ENST00000493945 CSADQ9Y600 493 aa17.64■□□□□ 0.41
ACTB-213ENST00000493945 SIPA1L1O43166 1804 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 TSPY2A6NKD2 308 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 TSPY3P0CV98 308 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 TSPY8P0CW00 308 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 CYP2D6P10635 497 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 CDK8P49336 464 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 CERKLQ49MI3 558 aaPredicted RBP17.63■□□□□ 0.41
ACTB-213ENST00000493945 SH3BP5LQ7L8J4 393 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 IQCA1Q86XH1 822 aa17.63■□□□□ 0.41
ACTB-213ENST00000493945 CYP2D7A0A087X1C5 515 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 ERICH2A1L162 156 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 ASNSP08243 561 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 GABPAQ06546 454 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 TSGA10IPQ3SY00 556 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 RRP12Q5JTH9 1297 aaKnown RBP17.62■□□□□ 0.41
ACTB-213ENST00000493945 WRNIP1Q96S55 665 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 TBC1D2Q9BYX2 928 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 GBA2Q9HCG7 927 aaPredicted RBP17.62■□□□□ 0.41
ACTB-213ENST00000493945 PICK1Q9NRD5 415 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 SCAF8Q9UPN6 1271 aaKnown RBP17.62■□□□□ 0.41
ACTB-213ENST00000493945 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
ACTB-213ENST00000493945 ATAD5Q96QE3 1844 aa17.61■□□□□ 0.41
ACTB-213ENST00000493945 MPHOSPH10O00566 681 aaKnown RBP17.61■□□□□ 0.41
ACTB-213ENST00000493945 RANBP6O60518 1105 aaKnown RBP17.61■□□□□ 0.41
ACTB-213ENST00000493945 CTNND1O60716 968 aaKnown RBP17.61■□□□□ 0.41
ACTB-213ENST00000493945 CELF2O95319 508 aaKnown RBP17.61■□□□□ 0.41
ACTB-213ENST00000493945 MAP3K10Q02779 954 aa17.61■□□□□ 0.41
ACTB-213ENST00000493945 MIGA2Q7L4E1 593 aa17.61■□□□□ 0.41
ACTB-213ENST00000493945 ANKRD13AQ8IZ07 590 aa17.61■□□□□ 0.41
ACTB-213ENST00000493945 UBAC1Q9BSL1 405 aa17.61■□□□□ 0.41
ACTB-213ENST00000493945 ANGEL1Q9UNK9 670 aaKnown RBP17.61■□□□□ 0.41
ACTB-213ENST00000493945 E7EWF7 191 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 ABCB5Q2M3G0 1257 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 TATDN1Q6P1N9 297 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 TMEM179Q6ZVK1 233 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 DYNLL2Q96FJ2 89 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 SH2D4AQ9H788 454 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 AS3MTQ9HBK9 375 aa17.6■□□□□ 0.41
ACTB-213ENST00000493945 SSC5DA1L4H1 1573 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms