RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 TUBE1Q9UJT0 475 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 MINPP1Q9UNW1 487 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 PRKAB2O43741 272 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 RXRAP19793 462 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 OLFM4Q6UX06 510 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 CATIPQ7Z7H3 387 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 MIGA1Q8NAN2 632 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 SETDB2Q96T68 719 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 BCL11BQ9C0K0 894 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 NARFQ9UHQ1 456 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 PAXBP1Q9Y5B6 917 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 KIF2AO00139 706 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 CBFA2T2O43439 604 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 RPS6KA4O75676 772 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 WDHD1O75717 1129 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 FGRP09769 529 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 MARCKSP29966 332 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 VPS72Q15906 364 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 TPTE2Q6XPS3 522 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 FBXO33Q7Z6M2 555 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 DIS3L2Q8IYB7 885 aaKnown RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 CCDC150Q8NCX0 1101 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 OSBPL5Q9H0X9 879 aaPredicted RBP11.11□□□□□ -0.63
NPHP3-209ENST00000493732 SENP2Q9HC62 589 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 BRMS1Q9HCU9 246 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 KCND1Q9NSA2 647 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 LTBP4Q8N2S1 1624 aa11.11□□□□□ -0.63
NPHP3-209ENST00000493732 MINDY4BA8MYZ0 360 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 SNAP23O00161 211 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 ZPR1O75312 459 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 DDAH1O94760 285 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 TUBB4AP04350 444 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 GYG1P46976 350 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 SHC4Q6S5L8 630 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 NBPF11Q86T75 865 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 LINC00116Q8NCU8 138 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 FAM84BQ96KN1 310 aaPredicted RBP11.1□□□□□ -0.63
NPHP3-209ENST00000493732 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
NPHP3-209ENST00000493732 MYL10Q9BUA6 226 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 CRNKL1Q9BZJ0 848 aaKnown RBP11.1□□□□□ -0.63
NPHP3-209ENST00000493732 ATP8A2Q9NTI2 1148 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 NRBP1Q9UHY1 535 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 KCNH3Q9ULD8 1083 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 TNKSO95271 1327 aa11.1□□□□□ -0.63
NPHP3-209ENST00000493732 SEC23AQ15436 765 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 DPCR1Q3MIW9 517 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
NPHP3-209ENST00000493732 KRBA2Q6ZNG9 492 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 CNNM3Q8NE01 707 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 CACTINQ8WUQ7 758 aaKnown RBP11.09□□□□□ -0.63
NPHP3-209ENST00000493732 PRPF3O43395 683 aaKnown RBP11.09□□□□□ -0.63
NPHP3-209ENST00000493732 KCNQ2O43526 872 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 ORC4O43929 436 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 PTPREP23469 700 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 HIBADHP31937 336 aaKnown RBP11.09□□□□□ -0.63
NPHP3-209ENST00000493732 KCNJ6P48051 423 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 IFIT1BQ5T764 474 aaKnown RBP11.09□□□□□ -0.63
NPHP3-209ENST00000493732 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
NPHP3-209ENST00000493732 TRIML1Q8N9V2 468 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 NUP133Q8WUM0 1156 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 INCENPQ9NQS7 918 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 SCN7AQ01118 1682 aa11.09□□□□□ -0.63
NPHP3-209ENST00000493732 BTBD18B2RXH4 712 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 CCP110O43303 1012 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 SKILP12757 684 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 MYL5Q02045 173 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.64
NPHP3-209ENST00000493732 SBK1Q52WX2 424 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 C17orf53Q8N3J3 647 aaPredicted RBP11.08□□□□□ -0.64
NPHP3-209ENST00000493732 NKX2-3Q8TAU0 364 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 SDR42E1Q8WUS8 393 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 ZKSCAN3Q9BRR0 538 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
NPHP3-209ENST00000493732 SRPRBQ9Y5M8 271 aaKnown RBP11.08□□□□□ -0.64
NPHP3-209ENST00000493732 TACC3Q9Y6A5 838 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 MROH7-TTC4A0A0A0MT08 1334 aa11.08□□□□□ -0.64
NPHP3-209ENST00000493732 SMC2O95347 1197 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 PDE4BQ07343 736 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 LRMPQ12912 555 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 SYCP1Q15431 976 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 CCDC144BQ3MJ40 725 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 FILIP1Q7Z7B0 1213 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 CERS3Q8IU89 383 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 NSUN4Q96CB9 384 aaKnown RBP11.07□□□□□ -0.64
NPHP3-209ENST00000493732 PYM1Q9BRP8 204 aaKnown RBP11.07□□□□□ -0.64
NPHP3-209ENST00000493732 TRIM75PA6NK02 468 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 TNNT1P13805 278 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 KRT2P35908 639 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms