RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ZKSCAN4Q969J2 545 aaPredicted RBP16.08■□□□□ 0.16
MSH6-208ENST00000493177 OSBP2Q969R2 916 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 FAM163AQ96GL9 167 aaPredicted RBP16.08■□□□□ 0.16
MSH6-208ENST00000493177 ABHD8Q96I13 439 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 IDI2Q9BXS1 227 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 MCOLN1Q9GZU1 580 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
MSH6-208ENST00000493177 FAM198AQ9UFP1 575 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 GPR75-ASB3A0A0A6YYF3 556 aa16.07■□□□□ 0.16
MSH6-208ENST00000493177 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
MSH6-208ENST00000493177 MBD4O95243 580 aa16.07■□□□□ 0.16
MSH6-208ENST00000493177 BAG3O95817 575 aa16.07■□□□□ 0.16
MSH6-208ENST00000493177 GJA5P36382 358 aa16.07■□□□□ 0.16
MSH6-208ENST00000493177 GTF2A2P52657 109 aa16.07■□□□□ 0.16
MSH6-208ENST00000493177 ADGRA1Q86SQ6 560 aa16.07■□□□□ 0.16
MSH6-208ENST00000493177 AATFQ9NY61 560 aaKnown RBP eCLIP16.07■□□□□ 0.16
MSH6-208ENST00000493177 RAD50Q92878 1312 aa16.07■□□□□ 0.16
MSH6-208ENST00000493177 CDK5RAP2Q96SN8 1893 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 CCL15-CCL14A0A0B4J2E2 113 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 SGSM2O43147 1006 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 GPAA1O43292 621 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 WDHD1O75717 1129 aaPredicted RBP16.06■□□□□ 0.16
MSH6-208ENST00000493177 MFAP1P55081 439 aaKnown RBP16.06■□□□□ 0.16
MSH6-208ENST00000493177 DYNLL1P63167 89 aaKnown RBP16.06■□□□□ 0.16
MSH6-208ENST00000493177 CCL15Q16663 113 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 KIAA1211Q6ZU35 1233 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 ERO1BQ86YB8 467 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 TEX11Q8IYF3 940 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 ARMT1Q9H993 441 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 SNCAIPQ9Y6H5 919 aa16.06■□□□□ 0.16
MSH6-208ENST00000493177 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 CCDC171Q6TFL3 1326 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 SPDYE5A6NIY4 337 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 CCDC85CA6NKD9 419 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 GPR25O00155 361 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 EIF5BO60841 1220 aaKnown RBP16.05■□□□□ 0.16
MSH6-208ENST00000493177 PLCG2P16885 1265 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 INPP5BP32019 993 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 ZNF589Q86UQ0 364 aaPredicted RBP16.05■□□□□ 0.16
MSH6-208ENST00000493177 ZFPM1Q8IX07 1006 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 ZNF296Q8WUU4 475 aaPredicted RBP16.05■□□□□ 0.16
MSH6-208ENST00000493177 FOCADQ5VW36 1801 aa16.05■□□□□ 0.16
MSH6-208ENST00000493177 ATAD5Q96QE3 1844 aa16.04■□□□□ 0.16
MSH6-208ENST00000493177 IGF2BP3O00425 579 aaKnown RBP eCLIP16.04■□□□□ 0.16
MSH6-208ENST00000493177 FKTNO75072 461 aa16.04■□□□□ 0.16
MSH6-208ENST00000493177 CTU1Q7Z7A3 348 aaKnown RBP16.04■□□□□ 0.16
MSH6-208ENST00000493177 IL25Q9H293 177 aa16.04■□□□□ 0.16
MSH6-208ENST00000493177 ANO2Q9NQ90 1003 aa16.04■□□□□ 0.16
MSH6-208ENST00000493177 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
MSH6-208ENST00000493177 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
MSH6-208ENST00000493177 CETPP11597 493 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 RHBDL3P58872 404 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 PPATQ06203 517 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 PPIL2Q13356 520 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 SNAPC2Q13487 334 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 TAF1CQ15572 869 aaPredicted RBP16.03■□□□□ 0.16
MSH6-208ENST00000493177 SH3RF3Q8TEJ3 882 aaPredicted RBP16.03■□□□□ 0.16
MSH6-208ENST00000493177 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
MSH6-208ENST00000493177 TRIM34Q9BYJ4 488 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 PICK1Q9NRD5 415 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 SLC4A4Q9Y6R1 1079 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 MYH1P12882 1939 aa16.03■□□□□ 0.16
MSH6-208ENST00000493177 REC8O95072 547 aa16.02■□□□□ 0.16
MSH6-208ENST00000493177 APPP05067 770 aa16.02■□□□□ 0.16
MSH6-208ENST00000493177 PPP4CP60510 307 aa16.02■□□□□ 0.16
MSH6-208ENST00000493177 CERS3Q8IU89 383 aa16.02■□□□□ 0.16
MSH6-208ENST00000493177 STRBPQ96SI9 672 aaKnown RBP16.02■□□□□ 0.16
MSH6-208ENST00000493177 BACH2Q9BYV9 841 aa16.02■□□□□ 0.16
MSH6-208ENST00000493177 CRNKL1Q9BZJ0 848 aaKnown RBP16.02■□□□□ 0.16
MSH6-208ENST00000493177 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.16
MSH6-208ENST00000493177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.02■□□□□ 0.16
MSH6-208ENST00000493177 TESPA1A2RU30 521 aaPredicted RBP16.01■□□□□ 0.15
MSH6-208ENST00000493177 IRF6O14896 467 aa16.01■□□□□ 0.15
MSH6-208ENST00000493177 GNAT2P19087 354 aa16.01■□□□□ 0.15
MSH6-208ENST00000493177 USP5P45974 858 aa16.01■□□□□ 0.15
MSH6-208ENST00000493177 CRHR2Q13324 411 aa16.01■□□□□ 0.15
MSH6-208ENST00000493177 BRI3BPQ8WY22 251 aa16.01■□□□□ 0.15
MSH6-208ENST00000493177 CFHR5Q9BXR6 569 aa16.01■□□□□ 0.15
MSH6-208ENST00000493177 ZFYVE28Q9HCC9 887 aa16.01■□□□□ 0.15
MSH6-208ENST00000493177 PRKAB2O43741 272 aa16■□□□□ 0.15
MSH6-208ENST00000493177 SEC24BO95487 1268 aa16■□□□□ 0.15
MSH6-208ENST00000493177 NOM1Q5C9Z4 860 aaKnown RBP16■□□□□ 0.15
MSH6-208ENST00000493177 NOL9Q5SY16 702 aaKnown RBP16■□□□□ 0.15
MSH6-208ENST00000493177 VPS53Q5VIR6 699 aa16■□□□□ 0.15
MSH6-208ENST00000493177 SH3BP5LQ7L8J4 393 aa16■□□□□ 0.15
MSH6-208ENST00000493177 MAPKAPK5Q8IW41 473 aa16■□□□□ 0.15
MSH6-208ENST00000493177 SCYL3Q8IZE3 742 aa16■□□□□ 0.15
MSH6-208ENST00000493177 TGFBRAP1Q8WUH2 860 aa16■□□□□ 0.15
MSH6-208ENST00000493177 SDR42E1Q8WUS8 393 aa16■□□□□ 0.15
MSH6-208ENST00000493177 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
MSH6-208ENST00000493177 MS4A4AQ96JQ5 239 aa16■□□□□ 0.15
MSH6-208ENST00000493177 R3HDMLQ9H3Y0 253 aa16■□□□□ 0.15
MSH6-208ENST00000493177 UPF2Q9HAU5 1272 aaKnown RBP16■□□□□ 0.15
MSH6-208ENST00000493177 ZNF112Q9UJU3 913 aa16■□□□□ 0.15
MSH6-208ENST00000493177 COL2A1P02458 1487 aaPredicted RBP15.99■□□□□ 0.15
MSH6-208ENST00000493177 FAM196BA6NMK8 535 aa15.99■□□□□ 0.15
MSH6-208ENST00000493177 PATL2C9JE40 543 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms